Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019666 Vanilla planifolia HOM05D005082 ORTHO05D006474 1.7e-98 362.8 210 100.0
MELO3C015693.2 Cucumis melo HOM05D005082 ORTHO05D006474 8.7e-50 201.1 207 51.7
TAR628G0288 Trochodendron aralioides HOM05D005082 ORTHO05D006474 3.3e-49 199.1 124 75.0
BcaB02g09792 Brassica carinata HOM05D005082 ORTHO05D006474 5.6e-49 198.4 209 53.1
ClCG02G003240 Citrullus lanatus HOM05D005082 ORTHO05D006474 5.6e-49 198.4 207 50.7
CsaV3_7G002150 Cucumis sativus L. HOM05D005082 ORTHO05D006474 5.6e-49 198.4 207 50.7
Gohir.D01G012800 Gossypium hirsutum HOM05D005082 ORTHO05D006474 9.6e-49 197.6 207 51.7
Sed0020521 Sechium edule HOM05D005082 ORTHO05D006474 9.6e-49 197.6 207 50.7
Duzib248G1564 Durio zibethinus HOM05D005082 ORTHO05D006474 1.6e-48 196.8 207 52.2
Gorai.002G014600 Gossypium raimondii HOM05D005082 ORTHO05D006474 2.1e-48 196.4 207 51.2
Dinv41859 Davidia involucrata HOM05D005082 ORTHO05D006474 2.8e-48 196.1 124 73.4
Duzib132G0508 Durio zibethinus HOM05D005082 ORTHO05D006474 4.8e-48 195.3 207 51.2
BcaC01g02661 Brassica carinata HOM05D005082 ORTHO05D006474 8.1e-48 194.5 209 51.7
C03p62220 Brassica napus HOM05D005082 ORTHO05D006474 8.1e-48 194.5 209 51.7
BolC3t18485H Brassica oleracea HOM05D005082 ORTHO05D006474 8.1e-48 194.5 209 51.7
Gohir.A01G011600 Gossypium hirsutum HOM05D005082 ORTHO05D006474 8.1e-48 194.5 207 50.7
AT5G64050 Arabidopsis thaliana HOM05D005082 ORTHO05D006474 1.1e-47 194.1 209 52.2
Actinidia20586 Actinidia chinensis HOM05D005082 ORTHO05D006474 2.4e-47 193.0 137 67.9
AL8G41310 Arabidopsis lyrata HOM05D005082 ORTHO05D006474 2.4e-47 193.0 209 51.7
CARHR277960 Cardamine hirsuta HOM05D005082 ORTHO05D006474 2.4e-47 193.0 207 51.2
ATR0605G166 Amborella trichopoda HOM05D005082 ORTHO05D006474 3.1e-47 192.6 124 74.2
MSTRG.16959 Avicennia marina HOM05D005082 ORTHO05D006474 3.1e-47 192.6 207 49.8
Atru.BG.54.p Acer truncatum HOM05D005082 ORTHO05D006474 4.0e-47 192.2 208 51.0
Thecc.02G148100 Theobroma cacao HOM05D005082 ORTHO05D006474 4.0e-47 192.2 207 51.2
Aa31LG1G17860 Aethionema arabicum HOM05D005082 ORTHO05D006474 5.3e-47 191.8 207 49.3
A06p30760 Brassica napus HOM05D005082 ORTHO05D006474 5.3e-47 191.8 209 51.2
BraA06t26018Z Brassica rapa HOM05D005082 ORTHO05D006474 5.3e-47 191.8 209 51.2
Manes.02G091600 Manihot esculenta HOM05D005082 ORTHO05D006474 5.3e-47 191.8 209 49.3
Sabra04G0140300 Salix brachista HOM05D005082 ORTHO05D006474 6.9e-47 191.4 124 72.6
Aqoxy6G02995 Aquilegia oxysepala HOM05D005082 ORTHO05D006474 9.0e-47 191.0 209 49.3
Rhsim04G0008200 Rhododendron simsii HOM05D005082 ORTHO05D006474 9.0e-47 191.0 209 48.8
Lj3g0023171 Lotus japonicus HOM05D005082 ORTHO05D006474 1.2e-46 190.7 207 49.3
THA.LOC104800058 Tarenaya hassleriana HOM05D005082 ORTHO05D006474 1.2e-46 190.7 207 49.8
CSS0015047 Camellia sinensis var. sinensis HOM05D005082 ORTHO05D006474 2.0e-46 189.9 125 70.4
PGR042G3506 Punica granatum HOM05D005082 ORTHO05D006474 2.0e-46 189.9 210 50.0
Sed0003916 Sechium edule HOM05D005082 ORTHO05D006474 2.0e-46 189.9 123 72.4
MD10G1011800 Malus domestica HOM05D005082 ORTHO05D006474 2.6e-46 189.5 124 71.8
CiPaw.05G095000 Carya illinoinensis HOM05D005082 ORTHO05D006474 4.5e-46 188.7 131 68.7
Sp2g27120 Schrenkiella parvula HOM05D005082 ORTHO05D006474 4.5e-46 188.7 124 71.8
Prupe.8G016800 Prunus persica HOM05D005082 ORTHO05D006474 5.8e-46 188.3 124 71.0
Carub.0008s2483 Capsella rubella HOM05D005082 ORTHO05D006474 7.6e-46 188.0 124 72.6
arahy.Tifrunner.gnm1.ann1.44ERQ5 Arachis hypogaea HOM05D005082 ORTHO05D006474 9.9e-46 187.6 207 49.3
Potri.009G169700 Populus trichocarpa HOM05D005082 ORTHO05D006474 9.9e-46 187.6 124 71.8
Sc08g0002050 Simmondsia chinensis HOM05D005082 ORTHO05D006474 9.9e-46 187.6 124 70.2
MD05G1011800 Malus domestica HOM05D005082 ORTHO05D006474 1.3e-45 187.2 124 71.0
vmacro16288 Vaccinium macrocarpon HOM05D005082 ORTHO05D006474 1.7e-45 186.8 134 66.4
CDE06G2564 Ceratophyllum demersum HOM05D005082 ORTHO05D006474 2.2e-45 186.4 209 48.3
Haze_01956 Corylus avellana HOM05D005082 ORTHO05D006474 2.2e-45 186.4 123 71.5
Dinv14185 Davidia involucrata HOM05D005082 ORTHO05D006474 2.9e-45 186.0 123 72.4
Cpa.g.c29182.1 Carica papaya HOM05D005082 ORTHO05D006474 3.8e-45 185.7 124 73.4
Lj5C170T16 Lonicera japonica HOM05D005082 ORTHO05D006474 4.9e-45 185.3 123 69.1
Oeu006114.1 Olea europaea HOM05D005082 ORTHO05D006474 4.9e-45 185.3 124 69.4
SalBow1G4726 Salvia bowleyana HOM05D005082 ORTHO05D006474 4.9e-45 185.3 123 74.0
Cfa005396 Carpinus fangiana HOM05D005082 ORTHO05D006474 6.4e-45 184.9 123 71.5
TWI59G1375 Tripterygium wilfordii HOM05D005082 ORTHO05D006474 6.4e-45 184.9 124 71.0
Glyma.07G124000 Glycine max HOM05D005082 ORTHO05D006474 8.4e-45 184.5 208 48.1
RcHm_v2.0_Chr6g0277491 Rosa chinensis HOM05D005082 ORTHO05D006474 1.1e-44 184.1 123 70.7
QL11p056821 Quercus lobata HOM05D005082 ORTHO05D006474 1.4e-44 183.7 123 71.5
Ciclev10028098m.g Citrus clementina HOM05D005082 ORTHO05D006474 1.9e-44 183.3 130 66.9
Os02g0121000 Oryza sativa ssp. japonica HOM05D005082 ORTHO05D006474 2.4e-44 183.0 208 49.0
Psat6g037120 Pisum sativum HOM05D005082 ORTHO05D006474 2.4e-44 183.0 210 48.6
TPR.G17355 Trifolium pratense HOM05D005082 ORTHO05D006474 2.4e-44 183.0 127 68.5
GSVIVG01023855001 Vitis vinifera HOM05D005082 ORTHO05D006474 2.4e-44 183.0 123 68.3
arahy.Tifrunner.gnm1.ann1.M18VWQ Arachis hypogaea HOM05D005082 ORTHO05D006474 3.2e-44 182.6 123 70.7
FAN20G1299 Fragaria x ananassa HOM05D005082 ORTHO05D006474 3.2e-44 182.6 123 69.9
FAN24G2999 Fragaria x ananassa HOM05D005082 ORTHO05D006474 3.2e-44 182.6 123 70.7
FAN27G0598 Fragaria x ananassa HOM05D005082 ORTHO05D006474 3.2e-44 182.6 123 69.9
Peaxi162Scf00362g00137 Petunia axillaris HOM05D005082 ORTHO05D006474 3.2e-44 182.6 209 45.5
FAN15G2332 Fragaria x ananassa HOM05D005082 ORTHO05D006474 4.2e-44 182.2 123 69.9
SGA_v2.0_scaffold5G02667 Striga asiatica HOM05D005082 ORTHO05D006474 4.2e-44 182.2 135 64.4
Migut.B00003 Erythranthe guttata HOM05D005082 ORTHO05D006474 5.4e-44 181.8 124 67.7
Ca_25889_v3 Cicer arietinum L. HOM05D005082 ORTHO05D006474 1.2e-43 180.6 210 50.0
COL.COLO4_03850 Corchorus olitorius HOM05D005082 ORTHO05D006474 1.2e-43 180.6 203 52.2
Lalb_Chr12g0210191 Lupinus albus HOM05D005082 ORTHO05D006474 1.6e-43 180.3 207 47.8
Eucgr.H05005 Eucalyptus grandis HOM05D005082 ORTHO05D006474 2.1e-43 179.9 207 46.4
Nitab4.5_0001220g0040 Nicotiana tabacum HOM05D005082 ORTHO05D006474 2.1e-43 179.9 124 66.1
Nitab4.5_0010601g0010 Nicotiana tabacum HOM05D005082 ORTHO05D006474 2.1e-43 179.9 124 66.1
DCAR_006224 Daucus carota HOM05D005082 ORTHO05D006474 1.0e-42 177.6 123 73.2
Nitab4.5_0005317g0010 Nicotiana tabacum HOM05D005082 ORTHO05D006474 1.0e-42 177.6 124 64.5
Zm00001eb230310 Zea mays HOM05D005082 ORTHO05D006474 1.0e-42 177.6 209 45.9
Ah.01g017700 Amaranthus hybridus HOM05D005082 ORTHO05D006474 1.3e-42 177.2 209 46.4
Glyma.03G097900 Glycine max HOM05D005082 ORTHO05D006474 1.8e-42 176.8 123 67.5
Medtr8g009900 Medicago truncatula HOM05D005082 ORTHO05D006474 1.8e-42 176.8 123 68.3
Phvul.010G038400 Phaseolus vulgaris HOM05D005082 ORTHO05D006474 1.8e-42 176.8 207 46.9
unitig_21.g20422 Utricularia gibba HOM05D005082 ORTHO05D006474 1.8e-42 176.8 124 67.7
PSO675G0919 Papaver somniferum HOM05D005082 ORTHO05D006474 3.0e-42 176.0 124 66.9
VMungo0331G1808 Vigna mungo HOM05D005082 ORTHO05D006474 3.0e-42 176.0 207 45.4
Lalb_Chr07g0194811 Lupinus albus HOM05D005082 ORTHO05D006474 3.9e-42 175.6 207 45.9
PSO210G0895 Papaver somniferum HOM05D005082 ORTHO05D006474 3.9e-42 175.6 124 66.9
CAN.G1645.8 Capsicum annuum HOM05D005082 ORTHO05D006474 5.1e-42 175.3 124 64.5
HanXRQChr14g0455171 Helianthus annuus HOM05D005082 ORTHO05D006474 8.7e-42 174.5 124 64.5
Thhalv10003868m.g Eutrema salsugineum HOM05D005082 ORTHO05D006474 1.1e-41 174.1 151 59.6
Zm00001eb208250 Zea mays HOM05D005082 ORTHO05D006474 1.1e-41 174.1 124 65.3
AUR62013197 Chenopodium quinoa HOM05D005082 ORTHO05D006474 1.9e-41 173.3 209 45.0
Solyc01g112290.4 Solanum lycopersicum HOM05D005082 ORTHO05D006474 1.9e-41 173.3 123 64.2
Sopen01g054400 Solanum pennellii HOM05D005082 ORTHO05D006474 4.3e-41 172.2 123 63.4
ECA233G3220 Erigeron canadensis HOM05D005082 ORTHO05D006474 5.6e-41 171.8 124 64.5
Hund06352 Selenicereus undatus HOM05D005082 ORTHO05D006474 7.4e-41 171.4 209 45.0
EL10Ac9g21557 Beta vulgaris HOM05D005082 ORTHO05D006474 9.6e-41 171.0 209 43.5
Cc09_g10910 Coffea canephora HOM05D005082 ORTHO05D006474 1.3e-40 170.6 123 64.2
Lsat_1_v5_gn_8_119500 Lactuca sativa HOM05D005082 ORTHO05D006474 2.8e-40 169.5 124 62.9
AUR62010207 Chenopodium quinoa HOM05D005082 ORTHO05D006474 4.8e-40 168.7 124 62.1
MBI01_g28404_MAGBIO Magnolia biondii HOM05D005082 ORTHO05D006474 4.8e-40 168.7 161 56.5
DCAR_001519 Daucus carota HOM05D005082 ORTHO05D006474 4.0e-39 165.6 124 61.3
SEGI_01300 Sequoiadendron giganteum HOM05D005082 ORTHO05D006474 4.0e-39 165.6 123 63.4
FvH4_2g14910 Fragaria vesca HOM05D005082 ORTHO05D006474 2.5e-36 156.4 91 79.1
Atru.chr5.3580 Acer truncatum HOM05D005082 ORTHO05D006474 3.2e-36 156.0 90 78.9
Mapoly0005s0181 Marchantia polymorpha HOM05D005082 ORTHO05D006474 4.2e-36 155.6 124 59.7
QL04p064927 Quercus lobata HOM05D005082 ORTHO05D006474 1.2e-35 154.1 90 77.8
AagrBONN_evm.TU.Sc2ySwM_117.3203 Anthoceros agrestis HOM05D005082 ORTHO05D006474 1.3e-34 150.6 124 54.8
CBR_g25940 Chara braunii HOM05D005082 ORTHO05D006474 3.3e-33 146.0 123 55.3
Psat4g215760 Pisum sativum HOM05D005082 ORTHO05D006474 7.4e-33 144.8 210 41.9
Pp3c1_10010 Physcomitrium patens HOM05D005082 ORTHO05D006474 1.5e-30 137.1 124 51.6
SMO134G0063 Selaginella moellendorffii HOM05D005082 ORTHO05D006474 1.0e-29 134.4 126 50.0
Cre07.g313700 Chlamydomonas reinhardtii HOM05D005082 ORTHO05D006474 4.6e-27 125.6 137 44.5
PRCOL_00001874 Prasinoderma coloniale HOM05D005082 ORTHO05D006474 3.0e-26 122.9 126 46.0
MCO11G616 Micromonas commoda HOM05D005082 ORTHO05D006474 3.9e-26 122.5 123 46.3
Lj9C409G5 Lonicera japonica HOM05D005082 ORTHO05D006474 1.8e-18 97.1 51 84.3
FAN08G2453 Fragaria x ananassa HOM05D005082 ORTHO05D006474 1.7e-13 80.5 69 60.9
Lj9C409G6 Lonicera japonica HOM05D005082 ORTHO05D006474 8.5e-13 78.2 169 34.3
FAN04G1942 Fragaria x ananassa HOM05D005082 ORTHO05D006474 9.4e-12 74.7 49 73.5
Pp3c2_37890 Physcomitrium patens HOM05D005082 ORTHO05D006474 3.0e-10 69.7 96 38.5
Haze_26742 Corylus avellana HOM05D005082 ORTHO05D006474 1.3e-08 64.3 76 46.1
Aqoxy144s004 Aquilegia oxysepala HOM05D005082 ORTHO05D006474 2.4e-07 60.1 74 36.5
FAN18G1553 Fragaria x ananassa HOM05D005082 ORTHO05D006474 1.5e-06 57.4 70 44.3


User provided reference genes

Program Settings