Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_017119 Vanilla planifolia HOM05D001810 ORTHO05D005662 1.5e-22 108.6 53 100.0
HPP92_017124 Vanilla planifolia HOM05D001810 ORTHO05D005662 5.3e-20 100.1 49 98.0
Gohir.D10G002300 Gossypium hirsutum HOM05D001810 ORTHO05D005662 2.9e-18 94.4 49 83.7
Gorai.011G002700 Gossypium raimondii HOM05D001810 ORTHO05D005662 2.9e-18 94.4 49 83.7
HanXRQChr12g0359701 Helianthus annuus HOM05D001810 ORTHO05D005662 2.9e-18 94.4 49 87.8
Sc15g0001050 Simmondsia chinensis HOM05D001810 ORTHO05D005662 4.9e-18 93.6 49 85.7
HanXRQChr10g0311191 Helianthus annuus HOM05D001810 ORTHO05D005662 8.4e-18 92.8 49 83.7
GSVIVG01029543001 Vitis vinifera HOM05D001810 ORTHO05D005662 8.4e-18 92.8 49 83.7
Gohir.A10G002300 Gossypium hirsutum HOM05D001810 ORTHO05D005662 1.1e-17 92.4 49 81.6
Potri.008G005200 Populus trichocarpa HOM05D001810 ORTHO05D005662 1.9e-17 91.7 49 83.7
Duzib192G0783 Durio zibethinus HOM05D001810 ORTHO05D005662 2.4e-17 91.3 49 81.6
Lsat_1_v5_gn_5_137241 Lactuca sativa HOM05D001810 ORTHO05D005662 2.4e-17 91.3 49 81.6
Eucgr.F04028 Eucalyptus grandis HOM05D001810 ORTHO05D005662 3.2e-17 90.9 49 79.6
PSO063G6510 Papaver somniferum HOM05D001810 ORTHO05D005662 3.2e-17 90.9 49 83.7
Thecc.06G057800 Theobroma cacao HOM05D001810 ORTHO05D005662 3.2e-17 90.9 49 79.6
arahy.Tifrunner.gnm1.ann1.02QZYL Arachis hypogaea HOM05D001810 ORTHO05D005662 4.2e-17 90.5 49 81.6
arahy.Tifrunner.gnm1.ann1.PFN72X Arachis hypogaea HOM05D001810 ORTHO05D005662 4.2e-17 90.5 49 81.6
FAN02G3504 Fragaria x ananassa HOM05D001810 ORTHO05D005662 4.2e-17 90.5 50 82.0
PSO170G1341 Papaver somniferum HOM05D001810 ORTHO05D005662 4.2e-17 90.5 49 81.6
Psat0s401g0040 Pisum sativum HOM05D001810 ORTHO05D005662 4.2e-17 90.5 49 81.6
CiPaw.01G091300 Carya illinoinensis HOM05D001810 ORTHO05D005662 5.4e-17 90.1 49 79.6
CDE02G1888 Ceratophyllum demersum HOM05D001810 ORTHO05D005662 5.4e-17 90.1 49 81.6
QL05p084562 Quercus lobata HOM05D001810 ORTHO05D005662 5.4e-17 90.1 49 81.6
Sabra10G0197000 Salix brachista HOM05D001810 ORTHO05D005662 5.4e-17 90.1 49 83.7
TPR.G14495 Trifolium pratense HOM05D001810 ORTHO05D005662 5.4e-17 90.1 49 79.6
Cfa002156 Carpinus fangiana HOM05D001810 ORTHO05D005662 7.1e-17 89.7 49 81.6
CsaV3_7G033720 Cucumis sativus L. HOM05D001810 ORTHO05D005662 7.1e-17 89.7 50 78.0
Dinv20338 Davidia involucrata HOM05D001810 ORTHO05D005662 7.1e-17 89.7 49 79.6
QL05p084936 Quercus lobata HOM05D001810 ORTHO05D005662 7.1e-17 89.7 49 79.6
Cc04_g00180 Coffea canephora HOM05D001810 ORTHO05D005662 9.3e-17 89.4 49 81.6
MD09G1164900 Malus domestica HOM05D001810 ORTHO05D005662 9.3e-17 89.4 49 77.6
Os02g0465400 Oryza sativa ssp. japonica HOM05D001810 ORTHO05D005662 9.3e-17 89.4 49 81.6
Peaxi162Scf00098g00116 Petunia axillaris HOM05D001810 ORTHO05D005662 9.3e-17 89.4 49 85.7
Potri.010G253200 Populus trichocarpa HOM05D001810 ORTHO05D005662 9.3e-17 89.4 49 83.7
Rhsim12G0215400 Rhododendron simsii HOM05D001810 ORTHO05D005662 9.3e-17 89.4 49 79.6
Actinidia31125 Actinidia chinensis HOM05D001810 ORTHO05D005662 1.2e-16 89.0 49 79.6
CANSAT21G0287 Cannabis sativa HOM05D001810 ORTHO05D005662 1.2e-16 89.0 49 83.7
Ca_20967_v3 Cicer arietinum L. HOM05D001810 ORTHO05D005662 1.6e-16 88.6 49 77.6
FAN09G1915 Fragaria x ananassa HOM05D001810 ORTHO05D005662 1.6e-16 88.6 49 81.6
Hma1.2p1_0517F.1_g170790 Hydrangea macrophylla HOM05D001810 ORTHO05D005662 1.6e-16 88.6 49 79.6
Lj3g0003975 Lotus japonicus HOM05D001810 ORTHO05D005662 1.6e-16 88.6 49 81.6
Medtr4g094512 Medicago truncatula HOM05D001810 ORTHO05D005662 1.6e-16 88.6 50 78.0
Nn8g40833 Nelumbo nucifera HOM05D001810 ORTHO05D005662 1.6e-16 88.6 49 77.6
TAR626G1482 Trochodendron aralioides HOM05D001810 ORTHO05D005662 1.6e-16 88.6 49 77.6
CAN.G226.21 Capsicum annuum HOM05D001810 ORTHO05D005662 2.1e-16 88.2 49 79.6
AUR62001341 Chenopodium quinoa HOM05D001810 ORTHO05D005662 2.1e-16 88.2 49 77.6
AUR62025664 Chenopodium quinoa HOM05D001810 ORTHO05D005662 2.1e-16 88.2 49 77.6
Ciclev10031631m.g Citrus clementina HOM05D001810 ORTHO05D005662 2.1e-16 88.2 49 77.6
MELO3C024285.2 Cucumis melo HOM05D001810 ORTHO05D005662 2.1e-16 88.2 50 76.0
DCAR_001417 Daucus carota HOM05D001810 ORTHO05D005662 2.1e-16 88.2 49 79.6
SalBow6G2819 Salvia bowleyana HOM05D001810 ORTHO05D005662 2.1e-16 88.2 49 79.6
Solyc01g009310.3 Solanum lycopersicum HOM05D001810 ORTHO05D005662 2.1e-16 88.2 49 81.6
Sopen01g004810 Solanum pennellii HOM05D001810 ORTHO05D005662 2.1e-16 88.2 49 81.6
TAR383G1089 Trochodendron aralioides HOM05D001810 ORTHO05D005662 2.1e-16 88.2 49 77.6
Zm00001eb240810 Zea mays HOM05D001810 ORTHO05D005662 2.1e-16 88.2 49 81.6
ClCG09G001620 Citrullus lanatus HOM05D001810 ORTHO05D005662 2.7e-16 87.8 49 77.6
ECA234G3188 Erigeron canadensis HOM05D001810 ORTHO05D005662 2.7e-16 87.8 49 79.6
Migut.I01196 Erythranthe guttata HOM05D001810 ORTHO05D005662 2.7e-16 87.8 49 83.7
MD17G1163300 Malus domestica HOM05D001810 ORTHO05D005662 2.7e-16 87.8 49 75.5
unitig_32.g11009 Utricularia gibba HOM05D001810 ORTHO05D005662 2.7e-16 87.8 49 77.6
VMungo0331G1029 Vigna mungo HOM05D001810 ORTHO05D005662 2.7e-16 87.8 49 77.6
Dinv37780 Davidia involucrata HOM05D001810 ORTHO05D005662 3.5e-16 87.4 49 77.6
Manes.14G008000 Manihot esculenta HOM05D001810 ORTHO05D005662 3.5e-16 87.4 49 79.6
Carub.0001s3950 Capsella rubella HOM05D001810 ORTHO05D005662 4.6e-16 87.0 49 79.6
CDE06G0171 Ceratophyllum demersum HOM05D001810 ORTHO05D005662 4.6e-16 87.0 49 75.5
FvH4_6g37020 Fragaria vesca HOM05D001810 ORTHO05D005662 4.6e-16 87.0 49 79.6
FAN14G2951 Fragaria x ananassa HOM05D001810 ORTHO05D005662 4.6e-16 87.0 49 79.6
Glyma.08G224200 Glycine max HOM05D001810 ORTHO05D005662 4.6e-16 87.0 49 79.6
CSS0020822 Camellia sinensis var. sinensis HOM05D001810 ORTHO05D005662 6.0e-16 86.7 49 73.5
FAN05G4051 Fragaria x ananassa HOM05D001810 ORTHO05D005662 6.0e-16 86.7 49 79.6
RcHm_v2.0_Chr2g0149571 Rosa chinensis HOM05D001810 ORTHO05D005662 6.0e-16 86.7 49 79.6
Sp1g37260 Schrenkiella parvula HOM05D001810 ORTHO05D005662 6.0e-16 86.7 49 79.6
PGSC0003DMG400014722 Solanum tuberosum HOM05D001810 ORTHO05D005662 6.0e-16 86.7 49 81.6
EL10Ac7g18159 Beta vulgaris HOM05D001810 ORTHO05D005662 7.9e-16 86.3 49 73.5
BcaB04g17250 Brassica carinata HOM05D001810 ORTHO05D005662 7.9e-16 86.3 49 79.6
BcaC01g01230 Brassica carinata HOM05D001810 ORTHO05D005662 7.9e-16 86.3 49 79.6
A08p03150 Brassica napus HOM05D001810 ORTHO05D005662 7.9e-16 86.3 49 79.6
C03p89630 Brassica napus HOM05D001810 ORTHO05D005662 7.9e-16 86.3 49 79.6
BolC3t21280H Brassica oleracea HOM05D001810 ORTHO05D005662 7.9e-16 86.3 49 79.6
BraA08t32347Z Brassica rapa HOM05D001810 ORTHO05D005662 7.9e-16 86.3 49 79.6
Prupe.3G022300 Prunus persica HOM05D001810 ORTHO05D005662 7.9e-16 86.3 49 75.5
Aa31LG8G6830 Aethionema arabicum HOM05D001810 ORTHO05D005662 1.0e-15 85.9 49 75.5
CARHR040440 Cardamine hirsuta HOM05D001810 ORTHO05D005662 1.0e-15 85.9 49 77.6
Thhalv10011498m.g Eutrema salsugineum HOM05D001810 ORTHO05D005662 1.0e-15 85.9 49 79.6
vmacro17056 Vaccinium macrocarpon HOM05D001810 ORTHO05D005662 1.0e-15 85.9 49 77.6
Atru.chr1.2655 Acer truncatum HOM05D001810 ORTHO05D005662 1.3e-15 85.5 49 73.5
Cpa.g.sc155.15 Carica papaya HOM05D001810 ORTHO05D005662 1.3e-15 85.5 49 75.5
Lj4A856T32 Lonicera japonica HOM05D001810 ORTHO05D005662 1.3e-15 85.5 49 75.5
Oeu038371.1 Olea europaea HOM05D001810 ORTHO05D005662 1.3e-15 85.5 49 77.6
SEGI_03617 Sequoiadendron giganteum HOM05D001810 ORTHO05D005662 1.3e-15 85.5 47 74.5
Lalb_Chr01g0011721 Lupinus albus HOM05D001810 ORTHO05D005662 2.3e-15 84.7 49 75.5
Aa31LG10G3860 Aethionema arabicum HOM05D001810 ORTHO05D005662 3.0e-15 84.3 49 75.5
ATR0626G056 Amborella trichopoda HOM05D001810 ORTHO05D005662 3.0e-15 84.3 47 76.6
Aqoxy7G02786 Aquilegia oxysepala HOM05D001810 ORTHO05D005662 3.0e-15 84.3 49 73.5
AT1G50430 Arabidopsis thaliana HOM05D001810 ORTHO05D005662 3.0e-15 84.3 49 75.5
AL1G58070 Arabidopsis lyrata HOM05D001810 ORTHO05D005662 3.9e-15 84.0 49 75.5
Phvul.010G163700 Phaseolus vulgaris HOM05D001810 ORTHO05D005662 3.9e-15 84.0 49 77.6
TWI18G1195 Tripterygium wilfordii HOM05D001810 ORTHO05D005662 5.1e-15 83.6 49 73.5
CAN.G1726.4 Capsicum annuum HOM05D001810 ORTHO05D005662 6.7e-15 83.2 49 77.6
Nitab4.5_0000380g0100 Nicotiana tabacum HOM05D001810 ORTHO05D005662 6.7e-15 83.2 49 77.6
Nitab4.5_0001491g0070 Nicotiana tabacum HOM05D001810 ORTHO05D005662 6.7e-15 83.2 49 77.6
Oeu035091.1 Olea europaea HOM05D001810 ORTHO05D005662 6.7e-15 83.2 49 75.5
PGR102G2479 Punica granatum HOM05D001810 ORTHO05D005662 6.7e-15 83.2 49 75.5
Solyc06g074090.3 Solanum lycopersicum HOM05D001810 ORTHO05D005662 6.7e-15 83.2 49 77.6
Sopen06g030510 Solanum pennellii HOM05D001810 ORTHO05D005662 6.7e-15 83.2 49 77.6
PGSC0003DMG400005931 Solanum tuberosum HOM05D001810 ORTHO05D005662 8.7e-15 82.8 49 75.5
THA.LOC104809047 Tarenaya hassleriana HOM05D001810 ORTHO05D005662 8.7e-15 82.8 49 71.4
TWI12G1300 Tripterygium wilfordii HOM05D001810 ORTHO05D005662 1.1e-14 82.4 49 71.4
Mapoly0015s0079 Marchantia polymorpha HOM05D001810 ORTHO05D005662 1.5e-14 82.0 50 72.0
A05p20170 Brassica napus HOM05D001810 ORTHO05D005662 1.9e-14 81.6 50 72.0
BraA05t20926Z Brassica rapa HOM05D001810 ORTHO05D005662 1.9e-14 81.6 50 72.0
MSTRG.10877 Avicennia marina HOM05D001810 ORTHO05D005662 9.6e-14 79.3 49 69.4
Sed0001452 Sechium edule HOM05D001810 ORTHO05D005662 9.6e-14 79.3 50 68.0
SMO365G0024 Selaginella moellendorffii HOM05D001810 ORTHO05D005662 2.8e-13 77.8 53 67.9
AagrBONN_evm.TU.Sc2ySwM_117.1409 Anthoceros agrestis HOM05D001810 ORTHO05D005662 8.1e-13 76.3 46 69.6
Pp3c24_10460 Physcomitrium patens HOM05D001810 ORTHO05D005662 8.1e-13 76.3 46 71.7
CBR_g20307 Chara braunii HOM05D001523 ORTHO05D000937 9.0e-12 72.8 46 69.6
BcaB02g11146 Brassica carinata HOM05D001810 ORTHO05D005662 1.7e-10 68.6 60 56.7
Actinidia00646 Actinidia chinensis HOM05D001810 ORTHO05D005662 1.2e-08 62.4 35 71.4
Pp3c16_25140 Physcomitrium patens HOM05D001810 ORTHO05D005662 4.6e-08 60.5 50 52.0
Mapoly0041s0083 Marchantia polymorpha HOM05D001810 ORTHO05D005662 1.0e-07 59.3 46 54.3


User provided reference genes

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