Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_015361 Vanilla planifolia HOM05D001082 ORTHO05D005120 2.8e-252 874.8 435 100.0
PSO782G2901 Papaver somniferum HOM05D001082 ORTHO05D005120 7.3e-51 205.7 391 36.3
Nn3g20376 Nelumbo nucifera HOM05D001082 ORTHO05D005120 2.0e-48 197.6 385 35.8
TAR629G2955 Trochodendron aralioides HOM05D001082 ORTHO05D005120 3.4e-48 196.8 392 36.0
Zm00001eb232140 Zea mays HOM05D001082 ORTHO05D005120 6.4e-47 192.6 667 28.0
TWI14G0841 Tripterygium wilfordii HOM05D001082 ORTHO05D005120 4.1e-46 189.9 388 36.3
Aqoxy5G03217 Aquilegia oxysepala HOM05D001082 ORTHO05D005120 7.1e-46 189.1 385 35.8
Atru.chr12.2422 Acer truncatum HOM05D001082 ORTHO05D005120 1.2e-45 188.3 389 35.5
ATR0810G183 Amborella trichopoda HOM05D001082 ORTHO05D005120 1.6e-45 188.0 390 34.6
Potri.001G078600 Populus trichocarpa HOM05D001082 ORTHO05D005120 1.6e-45 188.0 382 35.3
Sc07g0003370 Simmondsia chinensis HOM05D001082 ORTHO05D005120 4.6e-45 186.4 383 35.2
Migut.N00999 Erythranthe guttata HOM05D001082 ORTHO05D005120 1.7e-44 184.5 388 34.3
Solyc01g102540.3 Solanum lycopersicum HOM05D001082 ORTHO05D005120 2.3e-44 184.1 387 35.1
Sopen01g044980 Solanum pennellii HOM05D001082 ORTHO05D005120 2.3e-44 184.1 387 35.1
SalBow1G7939 Salvia bowleyana HOM05D001082 ORTHO05D005120 3.0e-44 183.7 389 33.9
DCAR_003267 Daucus carota HOM05D001082 ORTHO05D005120 3.9e-44 183.3 386 33.2
CDE01G0790 Ceratophyllum demersum HOM05D001082 ORTHO05D005120 6.6e-44 182.6 359 35.9
PGR042G2652 Punica granatum HOM05D001082 ORTHO05D005120 6.6e-44 182.6 388 34.8
GSVIVG01015912001 Vitis vinifera HOM05D001082 ORTHO05D005120 6.6e-44 182.6 386 34.7
CANSAT78G0369 Cannabis sativa HOM05D001082 ORTHO05D005120 1.1e-43 181.8 387 34.9
MSTRG.5181 Avicennia marina HOM05D001082 ORTHO05D005120 1.9e-43 181.0 395 34.2
CAN.G1379.30 Capsicum annuum HOM05D001082 ORTHO05D005120 1.9e-43 181.0 385 34.5
Dinv24538 Davidia involucrata HOM05D001082 ORTHO05D005120 2.5e-43 180.6 390 34.6
SGA_v2.0_scaffold8G04471 Striga asiatica HOM05D001082 ORTHO05D005120 3.3e-43 180.3 318 37.7
Nitab4.5_0000399g0040 Nicotiana tabacum HOM05D001082 ORTHO05D005120 5.6e-43 179.5 377 34.5
Sabra01G0055900 Salix brachista HOM05D001082 ORTHO05D005120 7.3e-43 179.1 383 33.9
Lsat_1_v5_gn_7_54700 Lactuca sativa HOM05D001082 ORTHO05D005120 1.2e-42 178.3 609 27.9
Manes.15G096100 Manihot esculenta HOM05D001082 ORTHO05D005120 1.6e-42 177.9 388 33.5
Haze_11087 Corylus avellana HOM05D001082 ORTHO05D005120 2.1e-42 177.6 388 33.5
Ciclev10000026m.g Citrus clementina HOM05D001082 ORTHO05D005120 2.8e-42 177.2 384 34.6
CiPaw.02G126600 Carya illinoinensis HOM05D001082 ORTHO05D005120 4.7e-42 176.4 389 32.1
Sp1g28860 Schrenkiella parvula HOM05D001082 ORTHO05D005120 6.2e-42 176.0 379 34.6
Ca_11506_v3 Cicer arietinum L. HOM05D001082 ORTHO05D005120 8.1e-42 175.6 385 33.2
TPR.G11274 Trifolium pratense HOM05D001082 ORTHO05D005120 1.1e-41 175.3 385 33.0
Cfa008545 Carpinus fangiana HOM05D001082 ORTHO05D005120 1.4e-41 174.9 388 33.0
vmacro01638 Vaccinium macrocarpon HOM05D001082 ORTHO05D005120 1.4e-41 174.9 395 33.4
ECA238G2349 Erigeron canadensis HOM05D001082 ORTHO05D005120 1.8e-41 174.5 383 33.7
QL10p065261 Quercus lobata HOM05D001082 ORTHO05D005120 2.4e-41 174.1 387 32.6
Lj5C310G5 Lonicera japonica HOM05D001082 ORTHO05D005120 3.1e-41 173.7 376 33.5
Medtr1g063180 Medicago truncatula HOM05D001082 ORTHO05D005120 3.1e-41 173.7 385 33.5
Psat6g073960 Pisum sativum HOM05D001082 ORTHO05D005120 3.1e-41 173.7 385 33.8
Ah.03g136660 Amaranthus hybridus HOM05D001082 ORTHO05D005120 5.2e-41 172.9 382 32.7
EL10Ac6g13928 Beta vulgaris HOM05D001082 ORTHO05D005120 5.2e-41 172.9 380 33.2
AT1G33410 Arabidopsis thaliana HOM05D001082 ORTHO05D005120 8.9e-41 172.2 376 34.0
Rhsim11G0112000 Rhododendron simsii HOM05D001082 ORTHO05D005120 8.9e-41 172.2 395 32.9
AUR62032513 Chenopodium quinoa HOM05D001082 ORTHO05D005120 1.2e-40 171.8 370 33.5
Hma1.2p1_0052F.1_g030150 Hydrangea macrophylla HOM05D001082 ORTHO05D005120 1.5e-40 171.4 224 43.8
Eucgr.G00034 Eucalyptus grandis HOM05D001082 ORTHO05D005120 2.0e-40 171.0 237 43.5
Glyma.10G055100 Glycine max HOM05D001082 ORTHO05D005120 2.0e-40 171.0 387 32.8
RcHm_v2.0_Chr2g0126921 Rosa chinensis HOM05D001082 ORTHO05D005120 2.0e-40 171.0 391 35.8
BcaB03g13701 Brassica carinata HOM05D001082 ORTHO05D005120 3.4e-40 170.2 377 35.5
Lj5g0014962 Lotus japonicus HOM05D001082 ORTHO05D005120 3.4e-40 170.2 385 33.2
Oeu010602.3 Olea europaea HOM05D001082 ORTHO05D005120 3.4e-40 170.2 433 31.2
FAN05G0906 Fragaria x ananassa HOM05D001082 ORTHO05D005120 4.4e-40 169.9 390 34.1
Atru.chr6.17 Acer truncatum HOM05D001082 ORTHO05D005120 5.8e-40 169.5 389 33.4
BcaC05g27806 Brassica carinata HOM05D001082 ORTHO05D005120 5.8e-40 169.5 381 34.1
C05p38080 Brassica napus HOM05D001082 ORTHO05D005120 5.8e-40 169.5 381 34.1
AUR62042820 Chenopodium quinoa HOM05D001082 ORTHO05D005120 5.8e-40 169.5 385 32.2
A05p24320 Brassica napus HOM05D001082 ORTHO05D005120 9.9e-40 168.7 381 34.1
BraA05t21326Z Brassica rapa HOM05D001082 ORTHO05D005120 9.9e-40 168.7 381 34.1
Peaxi162Scf00194g00732 Petunia axillaris HOM05D001082 ORTHO05D005120 9.9e-40 168.7 389 32.4
Phvul.007G218900 Phaseolus vulgaris HOM05D001082 ORTHO05D005120 9.9e-40 168.7 387 33.3
VMungo0720G0635 Vigna mungo HOM05D001082 ORTHO05D000001 9.9e-40 168.7 388 32.7
Thecc.06G064200 Theobroma cacao HOM05D001082 ORTHO05D005120 1.3e-39 168.3 382 33.2
Duzib235G1067 Durio zibethinus HOM05D001082 ORTHO05D005120 1.7e-39 167.9 383 33.2
Actinidia11712 Actinidia chinensis HOM05D001082 ORTHO05D005120 2.2e-39 167.5 390 31.8
CSS0006928 Camellia sinensis var. sinensis HOM05D001082 ORTHO05D005120 2.2e-39 167.5 379 33.8
CARHR032850 Cardamine hirsuta HOM05D001082 ORTHO05D005120 2.2e-39 167.5 382 33.5
CsaV3_2G011850 Cucumis sativus L. HOM05D001082 ORTHO05D005120 2.2e-39 167.5 400 33.2
Glyma.13G142200 Glycine max HOM05D001082 ORTHO05D005120 2.9e-39 167.2 388 32.7
Prupe.5G022000 Prunus persica HOM05D001082 ORTHO05D005120 3.8e-39 166.8 391 33.5
COL.COLO4_31206 Corchorus olitorius HOM05D001082 ORTHO05D005120 6.4e-39 166.0 383 33.4
FvH4_6g26400 Fragaria vesca HOM05D001082 ORTHO05D005120 8.4e-39 165.6 390 33.6
Gohir.A11G274000 Gossypium hirsutum HOM05D001082 ORTHO05D005120 8.4e-39 165.6 383 32.4
Gohir.D11G284200 Gossypium hirsutum HOM05D001082 ORTHO05D005120 8.4e-39 165.6 383 32.1
Lalb_Chr21g0315021 Lupinus albus HOM05D001082 ORTHO05D005120 1.9e-38 164.5 383 32.6
HanXRQChr14g0452101 Helianthus annuus HOM05D001082 ORTHO05D005120 2.4e-38 164.1 378 32.5
MELO3C020407.2 Cucumis melo HOM05D001082 ORTHO05D005120 3.2e-38 163.7 399 31.6
MD10G1009800 Malus domestica HOM05D001082 ORTHO05D005120 4.2e-38 163.3 390 31.8
THA.LOC104806485 Tarenaya hassleriana HOM05D001082 ORTHO05D005120 5.4e-38 162.9 388 33.0
Lj3g0009617 Lotus japonicus HOM05D001082 ORTHO05D005120 7.1e-38 162.5 366 33.3
arahy.Tifrunner.gnm1.ann1.922X53 Arachis hypogaea HOM05D001082 ORTHO05D005120 1.2e-37 161.8 400 30.8
arahy.Tifrunner.gnm1.ann1.Y1BA5Y Arachis hypogaea HOM05D001082 ORTHO05D005120 1.2e-37 161.8 400 30.8
PSO063G6006 Papaver somniferum HOM05D001082 ORTHO05D005120 2.1e-37 161.0 163 51.5
Gorai.007G307100 Gossypium raimondii HOM05D001082 ORTHO05D005120 2.7e-37 160.6 384 32.0
Aa31LG6G7920 Aethionema arabicum HOM05D001082 ORTHO05D005120 3.5e-37 160.2 384 32.8
Sed0025950 Sechium edule HOM05D001082 ORTHO05D005120 4.6e-37 159.8 397 33.2
RcHm_v2.0_Chr4g0402211 Rosa chinensis HOM05D001082 ORTHO05D005120 1.0e-36 158.7 366 35.0
Nitab4.5_0004090g0140 Nicotiana tabacum HOM05D001082 ORTHO05D005120 1.3e-36 158.3 277 37.9
Carub.0001s3160 Capsella rubella HOM05D001082 ORTHO05D005120 1.1e-35 155.2 236 42.4
AL1G47790 Arabidopsis lyrata HOM05D001082 ORTHO05D005120 1.9e-35 154.5 230 42.2
ClCG06G008360 Citrullus lanatus HOM05D001082 ORTHO05D005120 9.6e-35 152.1 244 39.3
SEGI_12765 Sequoiadendron giganteum HOM05D001082 ORTHO05D005120 2.1e-34 151.0 238 39.9
BolC5t32536H Brassica oleracea HOM05D001082 ORTHO05D005120 1.8e-33 147.9 233 40.3
ECA233G1839 Erigeron canadensis HOM05D001082 ORTHO05D005120 1.5e-32 144.8 371 31.0
SMO239G0052 Selaginella moellendorffii HOM05D001082 ORTHO05D005120 1.1e-30 138.7 375 29.9
ECA233G1970 Erigeron canadensis HOM05D001082 ORTHO05D005120 2.7e-29 134.0 345 30.7
arahy.Tifrunner.gnm1.ann1.CLUS6A Arachis hypogaea HOM05D001082 ORTHO05D005120 3.5e-29 133.7 394 28.2
AagrBONN_evm.TU.Sc2ySwM_362.2782 Anthoceros agrestis HOM05D001082 ORTHO05D005120 7.9e-29 132.5 297 31.6
Thhalv10006552m.g Eutrema salsugineum HOM05D001082 ORTHO05D005120 1.3e-28 131.7 143 53.1
unitig_22.g5791 Utricularia gibba HOM05D001082 ORTHO05D005120 3.9e-28 130.2 357 28.6
MD05G1161100 Malus domestica HOM05D001082 ORTHO05D005120 8.7e-28 129.0 142 48.6
Pp3c11_26590 Physcomitrium patens HOM05D001082 ORTHO05D005120 2.4e-25 120.9 182 42.3
ECA233G2822 Erigeron canadensis HOM05D001082 ORTHO05D005120 1.2e-24 118.6 316 30.4
MD05G1162400 Malus domestica HOM05D001082 ORTHO05D005120 1.2e-24 118.6 135 47.4
SEGI_00916 Sequoiadendron giganteum HOM05D001082 ORTHO05D005120 2.2e-23 114.4 101 52.5
MD08G1158600 Malus domestica HOM05D001082 ORTHO05D005120 1.1e-22 112.1 292 30.8
SHI21156 Sapria himalayana HOM05D001082 ORTHO05D005120 4.6e-21 106.7 136 44.1
Mapoly0008s0081 Marchantia polymorpha HOM05D001082 ORTHO05D005120 1.8e-20 104.8 133 42.9
SEGI_08839 Sequoiadendron giganteum HOM05D001082 ORTHO05D005120 8.1e-18 95.9 215 33.0
CBR_g55211 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-17 95.5 155 35.5
Lsat_1_v5_gn_8_801 Lactuca sativa HOM05D000349 ORTHO05D005120 9.3e-14 82.4 56 64.3
Cpa.g.sc21.217 Carica papaya HOM05D001082 ORTHO05D005120 4.1e-09 67.0 191 29.3
Oeu010603.1 Olea europaea HOM05D001082 ORTHO05D005120 5.0e-07 60.1 45 66.7


User provided reference genes

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