Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014289 Vanilla planifolia HOM05D007241 ORTHO05D009142 2.2e-128 462.2 226 100.0
Cpa.g.sc56.88 Carica papaya HOM05D007241 ORTHO05D009142 7.9e-65 251.1 247 51.4
PGR004G2498 Punica granatum HOM05D007241 ORTHO05D009142 1.0e-64 250.8 238 50.8
MELO3C003216.2 Cucumis melo HOM05D007241 ORTHO05D009142 3.9e-64 248.8 230 52.2
Duzib093G2007 Durio zibethinus HOM05D007241 ORTHO05D009142 5.1e-64 248.4 247 51.4
TWI74G0988 Tripterygium wilfordii HOM05D007241 ORTHO05D009142 6.7e-64 248.1 245 51.0
GSVIVG01034032001 Vitis vinifera HOM05D007241 ORTHO05D009142 1.1e-63 247.3 250 51.2
Eucgr.K03006 Eucalyptus grandis HOM05D007241 ORTHO05D009142 1.5e-63 246.9 247 50.2
MBI14_g28606_MAGBIO Magnolia biondii HOM05D007241 ORTHO05D009142 1.5e-63 246.9 249 49.8
Nn2g11326 Nelumbo nucifera HOM05D007241 ORTHO05D009142 1.5e-63 246.9 245 52.2
CsaV3_4G025900 Cucumis sativus L. HOM05D007241 ORTHO05D009142 7.4e-63 244.6 230 51.3
Glyma.01G109100 Glycine max HOM05D007241 ORTHO05D009142 9.6e-63 244.2 250 49.6
TAR633G0637 Trochodendron aralioides HOM05D007241 ORTHO05D009142 1.6e-62 243.4 249 51.8
ClCG04G007350 Citrullus lanatus HOM05D007241 ORTHO05D009142 2.8e-62 242.7 242 49.6
Atru.chr8.2123 Acer truncatum HOM05D007241 ORTHO05D009142 6.2e-62 241.5 229 53.3
CANSAT35G2041 Cannabis sativa HOM05D007241 ORTHO05D009142 8.1e-62 241.1 235 49.4
Ciclev10012141m.g Citrus clementina HOM05D007241 ORTHO05D009142 8.1e-62 241.1 242 49.6
Manes.08G083700 Manihot esculenta HOM05D007241 ORTHO05D009142 8.1e-62 241.1 244 49.2
Thecc.05G024800 Theobroma cacao HOM05D007241 ORTHO05D009142 8.1e-62 241.1 246 49.2
Nitab4.5_0007671g0010 Nicotiana tabacum HOM05D007241 ORTHO05D009142 1.1e-61 240.7 248 49.2
Potri.006G094800 Populus trichocarpa HOM05D007241 ORTHO05D009142 1.1e-61 240.7 250 50.4
VMungo0331G1333 Vigna mungo HOM05D007241 ORTHO05D009142 1.1e-61 240.7 250 48.8
Sabra06G0072600 Salix brachista HOM05D007241 ORTHO05D009142 1.4e-61 240.4 245 51.8
CSS0004399 Camellia sinensis var. sinensis HOM05D007241 ORTHO05D009142 1.8e-61 240.0 245 50.6
Sed0022131 Sechium edule HOM05D007241 ORTHO05D009142 1.8e-61 240.0 232 49.6
Haze_20925 Corylus avellana HOM05D007241 ORTHO05D009142 2.4e-61 239.6 250 50.4
ATR0618G224 Amborella trichopoda HOM05D007241 ORTHO05D009142 3.1e-61 239.2 240 52.1
Sopen09g006650 Solanum pennellii HOM05D007241 ORTHO05D009142 6.9e-61 238.0 246 48.8
AUR62015997 Chenopodium quinoa HOM05D007241 ORTHO05D009142 9.0e-61 237.7 240 48.8
Duzib106G0374 Durio zibethinus HOM05D007241 ORTHO05D009142 9.0e-61 237.7 247 49.0
Sc22g0004510 Simmondsia chinensis HOM05D007241 ORTHO05D009142 1.2e-60 237.3 240 48.8
Solyc09g011830.4 Solanum lycopersicum HOM05D007241 ORTHO05D009142 1.2e-60 237.3 246 48.4
CiPaw.10G153200 Carya illinoinensis HOM05D007241 ORTHO05D009142 2.0e-60 236.5 250 51.2
PGSC0003DMG400020362 Solanum tuberosum HOM05D007241 ORTHO05D009142 2.0e-60 236.5 246 49.2
Hma1.2p1_0671F.1_g200780 Hydrangea macrophylla HOM05D007241 ORTHO05D009142 2.6e-60 236.1 234 51.7
Prupe.6G268100 Prunus persica HOM05D007241 ORTHO05D009142 2.6e-60 236.1 241 49.4
Nitab4.5_0000008g0420 Nicotiana tabacum HOM05D007241 ORTHO05D009142 4.5e-60 235.3 248 48.8
EL10Ac3g05675 Beta vulgaris HOM05D007241 ORTHO05D009142 5.8e-60 235.0 234 49.6
CAN.G1233.2 Capsicum annuum HOM05D007241 ORTHO05D009142 1.0e-59 234.2 240 49.2
Lalb_Chr13g0291331 Lupinus albus HOM05D007241 ORTHO05D009142 1.7e-59 233.4 244 49.2
Phvul.010G006200 Phaseolus vulgaris HOM05D007241 ORTHO05D009142 8.4e-59 231.1 250 45.2
PSO063G4791 Papaver somniferum HOM05D007241 ORTHO05D009142 1.1e-58 230.7 246 47.2
Cc06_g01830 Coffea canephora HOM05D007241 ORTHO05D009142 1.4e-58 230.3 249 47.8
Gorai.012G110300 Gossypium raimondii HOM05D007241 ORTHO05D009142 1.4e-58 230.3 254 47.2
Oeu015010.1 Olea europaea HOM05D007241 ORTHO05D009142 1.4e-58 230.3 248 46.4
arahy.Tifrunner.gnm1.ann1.IV4I8P Arachis hypogaea HOM05D007241 ORTHO05D009142 1.9e-58 229.9 243 48.6
MSTRG.5609 Avicennia marina HOM05D007241 ORTHO05D009142 1.9e-58 229.9 242 47.9
RcHm_v2.0_Chr3g0464151 Rosa chinensis HOM05D007241 ORTHO05D009142 1.9e-58 229.9 243 48.6
FAN02G0490 Fragaria x ananassa HOM05D007241 ORTHO05D009142 3.2e-58 229.2 238 48.3
Gohir.D04G127300 Gossypium hirsutum HOM05D007241 ORTHO05D009142 4.2e-58 228.8 260 46.2
FvH4_6g12350 Fragaria vesca HOM05D007241 ORTHO05D009142 5.5e-58 228.4 238 48.7
Peaxi162Scf00427g00616 Petunia axillaris HOM05D007241 ORTHO05D009142 7.1e-58 228.0 246 46.3
Thhalv10021091m.g Eutrema salsugineum HOM05D007241 ORTHO05D009142 9.3e-58 227.6 251 45.4
SalBow3G1957 Salvia bowleyana HOM05D007241 ORTHO05D009142 1.2e-57 227.3 248 47.2
FAN05G2185 Fragaria x ananassa HOM05D007241 ORTHO05D009142 1.6e-57 226.9 238 47.9
FAN14G0673 Fragaria x ananassa HOM05D007241 ORTHO05D009142 2.1e-57 226.5 237 48.5
Aqoxy1G00764 Aquilegia oxysepala HOM05D007241 ORTHO05D009142 1.0e-56 224.2 246 49.6
Lj3g0002129 Lotus japonicus HOM05D007241 ORTHO05D009142 1.8e-56 223.4 247 47.8
Dinv35525 Davidia involucrata HOM05D007241 ORTHO05D009142 2.3e-56 223.0 228 50.4
Sp3g07590 Schrenkiella parvula HOM05D007241 ORTHO05D009142 2.3e-56 223.0 249 44.6
Ah.07g207300 Amaranthus hybridus HOM05D007241 ORTHO05D009142 8.7e-56 221.1 240 47.1
BcaC09g48011 Brassica carinata HOM05D007241 ORTHO05D009142 8.7e-56 221.1 242 45.5
Carub.0003s0832 Capsella rubella HOM05D007241 ORTHO05D009142 8.7e-56 221.1 241 46.1
CARHR083550 Cardamine hirsuta HOM05D007241 ORTHO05D009142 1.5e-55 220.3 247 44.9
Psat7g241800 Pisum sativum HOM05D007241 ORTHO05D009142 1.9e-55 219.9 249 48.2
THA.LOC104823276 Tarenaya hassleriana HOM05D007241 ORTHO05D009142 2.5e-55 219.5 254 44.5
Aa31LG3G1690 Aethionema arabicum HOM05D007241 ORTHO05D009142 3.3e-55 219.2 250 44.8
AL3G20320 Arabidopsis lyrata HOM05D007241 ORTHO05D009142 4.3e-55 218.8 249 45.0
BcaC09g48056 Brassica carinata HOM05D007241 ORTHO05D009142 5.7e-55 218.4 246 45.5
AT3G09210 Arabidopsis thaliana HOM05D007241 ORTHO05D009142 7.4e-55 218.0 245 44.5
BolC1t05471H Brassica oleracea HOM05D007241 ORTHO05D009142 7.4e-55 218.0 246 44.7
Ca_20114_v3 Cicer arietinum L. HOM05D007241 ORTHO05D009142 4.8e-54 215.3 302 41.1
unitig_749.g14176 Utricularia gibba HOM05D007241 ORTHO05D009142 4.8e-54 215.3 230 47.8
Hund04733 Selenicereus undatus HOM05D007241 ORTHO05D009142 1.1e-53 214.2 237 46.8
BraA01t04312Z Brassica rapa HOM05D007241 ORTHO05D009142 1.8e-53 213.4 246 44.7
SGA_v2.0_scaffold85G26792 Striga asiatica HOM05D007241 ORTHO05D009142 1.8e-53 213.4 229 47.6
Medtr4g019060 Medicago truncatula HOM05D007241 ORTHO05D009142 3.1e-53 212.6 249 45.0
Migut.J00242 Erythranthe guttata HOM05D007241 ORTHO05D009142 6.9e-53 211.5 235 46.8
Os03g0825500 Oryza sativa ssp. japonica HOM05D007241 ORTHO05D009142 3.4e-52 209.1 234 46.2
Lsat_1_v5_gn_2_72881 Lactuca sativa HOM05D007241 ORTHO05D009142 5.0e-51 205.3 226 45.1
arahy.Tifrunner.gnm1.ann1.D4R6TJ Arachis hypogaea HOM05D007241 ORTHO05D009142 1.1e-50 204.1 289 40.8
vmacro20223 Vaccinium macrocarpon HOM05D007241 ORTHO05D009142 1.9e-50 203.4 252 41.3
DCAR_010398 Daucus carota HOM05D007241 ORTHO05D009142 4.2e-50 202.2 290 38.3
HanXRQChr10g0300011 Helianthus annuus HOM05D007241 ORTHO05D009142 4.2e-50 202.2 221 44.3
Gohir.A04G087000 Gossypium hirsutum HOM05D007241 ORTHO05D009142 2.5e-47 193.0 247 42.9
CDE04G1578 Ceratophyllum demersum HOM05D007241 ORTHO05D009142 5.7e-47 191.8 218 45.0
ECA233G2042 Erigeron canadensis HOM05D007241 ORTHO05D009142 1.3e-46 190.7 226 43.8
Zm00001eb063100 Zea mays HOM05D007241 ORTHO05D009142 1.4e-45 187.2 238 41.2
MD04G1143600 Malus domestica HOM05D007241 ORTHO05D009142 1.5e-44 183.7 212 44.3
Actinidia13799 Actinidia chinensis HOM05D007241 ORTHO05D009142 7.7e-44 181.4 210 45.7
Rhsim05G0202600 Rhododendron simsii HOM05D007241 ORTHO05D009142 1.1e-42 177.6 246 42.3
arahy.Tifrunner.gnm1.ann1.4L01Q9 Arachis hypogaea HOM05D007241 ORTHO05D009142 2.0e-39 166.8 200 45.0
TPR.G8187 Trifolium pratense HOM05D007241 ORTHO05D009142 2.0e-31 140.2 235 37.4
AUR62021204 Chenopodium quinoa HOM05D007241 ORTHO05D009142 1.1e-29 134.4 240 35.8
Mapoly0003s0142 Marchantia polymorpha HOM05D007241 ORTHO05D009142 5.9e-28 128.6 231 30.3
Pp3c24_19950 Physcomitrium patens HOM05D007241 ORTHO05D009142 8.0e-25 118.2 233 29.6
TPR.G40038 Trifolium pratense HOM05D007241 ORTHO05D009142 2.7e-20 103.2 93 53.8
Lj3A958T74 Lonicera japonica HOM05D007241 ORTHO05D009142 2.3e-16 90.1 126 38.9
CBR_g25746 Chara braunii HOM05D000019 ORTHO05D000048 3.4e-15 86.3 209 24.9
TAR629G1375 Trochodendron aralioides HOM05D007241 ORTHO05D009142 6.5e-11 72.0 52 65.4
COL.COLO4_14646 Corchorus olitorius HOM05D007241 ORTHO05D009142 7.2e-10 68.6 44 65.9
SMO164G0023 Selaginella moellendorffii HOM05D007241 ORTHO05D009142 7.2e-10 68.6 243 23.9
SEGI_13087 Sequoiadendron giganteum HOM05D007241 ORTHO05D009142 3.6e-09 66.2 93 36.6
COL.COLO4_14645 Corchorus olitorius HOM05D007241 ORTHO05D009142 8.8e-08 61.6 129 33.3
MD12G1157800 Malus domestica HOM05D007241 ORTHO05D009142 5.7e-07 58.9 44 52.3
Lj3A958T75 Lonicera japonica HOM05D007241 ORTHO05D009142 3.7e-06 56.2 45 48.9


User provided reference genes

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