Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013948 Vanilla planifolia HOM05D001053 ORTHO05D007087 9.5e-106 386.7 179 100.0
CANSAT80G1114 Cannabis sativa HOM05D001053 ORTHO05D007087 3.6e-28 129.0 138 49.3
TWI81G0178 Tripterygium wilfordii HOM05D001053 ORTHO05D007087 4.7e-28 128.6 133 50.4
CiPaw.15G127300 Carya illinoinensis HOM05D001053 ORTHO05D007087 3.9e-27 125.6 182 42.3
Manes.01G020400 Manihot esculenta HOM05D001053 ORTHO05D007087 8.8e-27 124.4 134 48.5
Thecc.03G028900 Theobroma cacao HOM05D001053 ORTHO05D007087 8.8e-27 124.4 134 47.8
Gorai.008G285500 Gossypium raimondii HOM05D001053 ORTHO05D007087 1.1e-26 124.0 139 46.0
Gohir.D12G265800 Gossypium hirsutum HOM05D001053 ORTHO05D007087 2.0e-26 123.2 139 46.0
MD14G1222300 Malus domestica HOM05D001053 ORTHO05D007087 2.0e-26 123.2 106 55.7
Sc10g0009540 Simmondsia chinensis HOM05D001053 ORTHO05D007087 2.0e-26 123.2 150 46.7
Gohir.A12G265600 Gossypium hirsutum HOM05D001053 ORTHO05D007087 2.6e-26 122.9 141 44.7
QL10p022503 Quercus lobata HOM05D001053 ORTHO05D007087 9.7e-26 120.9 131 47.3
Atru.chr4.2606 Acer truncatum HOM05D001053 ORTHO05D007087 1.7e-25 120.2 134 48.5
Atru.chr4.2605 Acer truncatum HOM05D001053 ORTHO05D007087 2.2e-25 119.8 134 48.5
EL10Ac5g11255 Beta vulgaris HOM05D001053 ORTHO05D007087 2.8e-25 119.4 151 43.7
Sed0003489 Sechium edule HOM05D001053 ORTHO05D007087 6.3e-25 118.2 133 45.9
Potri.012G060400 Populus trichocarpa HOM05D001053 ORTHO05D007087 1.4e-24 117.1 154 44.8
DCAR_023185 Daucus carota HOM05D001053 ORTHO05D007087 1.8e-24 116.7 171 40.4
RcHm_v2.0_Chr7g0184671 Rosa chinensis HOM05D001053 ORTHO05D007087 2.4e-24 116.3 175 39.4
MD06G1211800 Malus domestica HOM05D001053 ORTHO05D007087 3.1e-24 115.9 144 46.5
PGR083G1355 Punica granatum HOM05D001053 ORTHO05D007087 4.1e-24 115.5 127 48.8
Actinidia31025 Actinidia chinensis HOM05D001053 ORTHO05D007087 5.3e-24 115.2 131 47.3
TAR622G0805 Trochodendron aralioides HOM05D001053 ORTHO05D007087 1.2e-23 114.0 185 38.4
Eucgr.B00702 Eucalyptus grandis HOM05D001053 ORTHO05D007087 1.6e-23 113.6 130 45.4
FAN18G3757 Fragaria x ananassa HOM05D001053 ORTHO05D007087 1.6e-23 113.6 177 39.0
Sabra12G0043500 Salix brachista HOM05D001053 ORTHO05D007087 1.6e-23 113.6 135 48.1
Dinv40429 Davidia involucrata HOM05D001053 ORTHO05D007087 2.0e-23 113.2 131 47.3
FAN04G2323 Fragaria x ananassa HOM05D001053 ORTHO05D007087 2.0e-23 113.2 173 38.7
FvH4_5g12660 Fragaria vesca HOM05D001053 ORTHO05D007087 2.6e-23 112.8 173 38.7
FAN18G2590 Fragaria x ananassa HOM05D001053 ORTHO05D007087 2.6e-23 112.8 173 38.7
FAN13G1473 Fragaria x ananassa HOM05D001053 ORTHO05D007087 3.5e-23 112.5 173 38.7
HanXRQChr09g0269881 Helianthus annuus HOM05D001053 ORTHO05D007087 4.5e-23 112.1 116 46.6
Duzib205G1271 Durio zibethinus HOM05D001053 ORTHO05D007087 5.9e-23 111.7 133 45.1
MELO3C015103.2 Cucumis melo HOM05D001053 ORTHO05D007087 7.7e-23 111.3 132 45.5
Peaxi162Scf00015g00729 Petunia axillaris HOM05D001053 ORTHO05D007087 7.7e-23 111.3 109 50.5
PGSC0003DMG400005706 Solanum tuberosum HOM05D001053 ORTHO05D007087 7.7e-23 111.3 132 45.5
Ciclev10019370m.g Citrus clementina HOM05D001053 ORTHO05D007087 1.7e-22 110.2 132 44.7
Cc04_g07470 Coffea canephora HOM05D001053 ORTHO05D007087 1.7e-22 110.2 133 44.4
CAN.G438.119 Capsicum annuum HOM05D001053 ORTHO05D007087 2.2e-22 109.8 109 49.5
Cpa.g.sc13.45 Carica papaya HOM05D001053 ORTHO05D007087 2.2e-22 109.8 114 50.9
unitig_46.g18490 Utricularia gibba HOM05D001053 ORTHO05D007087 2.9e-22 109.4 114 50.0
Sopen03g038580 Solanum pennellii HOM05D001053 ORTHO05D007087 3.8e-22 109.0 132 45.5
GSVIVG01008242001 Vitis vinifera HOM05D001053 ORTHO05D007087 5.0e-22 108.6 159 42.1
Phvul.003G176700 Phaseolus vulgaris HOM05D001053 ORTHO05D007087 6.5e-22 108.2 161 39.8
CsaV3_1G043530 Cucumis sativus L. HOM05D001053 ORTHO05D007087 8.5e-22 107.8 138 46.4
Nitab4.5_0001599g0120 Nicotiana tabacum HOM05D001053 ORTHO05D007087 8.5e-22 107.8 132 43.2
Aqoxy3G00397 Aquilegia oxysepala HOM05D001053 ORTHO05D007087 1.1e-21 107.5 165 41.2
Nitab4.5_0000410g0030 Nicotiana tabacum HOM05D001053 ORTHO05D007087 1.1e-21 107.5 134 44.8
Solyc03g119730.3 Solanum lycopersicum HOM05D001053 ORTHO05D007087 1.1e-21 107.5 132 43.9
vmacro17672 Vaccinium macrocarpon HOM05D001053 ORTHO05D007087 2.5e-21 106.3 153 43.1
Medtr4g111985 Medicago truncatula HOM05D001053 ORTHO05D007087 7.2e-21 104.8 177 39.0
THA.LOC104820404 Tarenaya hassleriana HOM05D001053 ORTHO05D007087 7.2e-21 104.8 137 41.6
ATR0115G004 Amborella trichopoda HOM05D001053 ORTHO05D007087 9.4e-21 104.4 167 38.3
Psat4g043200 Pisum sativum HOM05D001053 ORTHO05D007087 9.4e-21 104.4 134 43.3
Lsat_1_v5_gn_4_115781 Lactuca sativa HOM05D001053 ORTHO05D007087 2.1e-20 103.2 129 42.6
CSS0027606 Camellia sinensis var. sinensis HOM05D001053 ORTHO05D007087 3.6e-20 102.4 133 42.1
Nn4g23728 Nelumbo nucifera HOM05D001053 ORTHO05D007087 3.6e-20 102.4 104 47.1
COL.COLO4_22724 Corchorus olitorius HOM05D001053 ORTHO05D007087 4.7e-20 102.1 174 38.5
Lalb_Chr13g0302311 Lupinus albus HOM05D001053 ORTHO05D007087 4.7e-20 102.1 137 43.8
PSO017G2978 Papaver somniferum HOM05D001053 ORTHO05D007087 8.0e-20 101.3 179 37.4
SGA_v2.0_scaffold171G38938 Striga asiatica HOM05D001053 ORTHO05D007087 8.0e-20 101.3 118 45.8
Sp3g16610 Schrenkiella parvula HOM05D001053 ORTHO05D007087 1.0e-19 100.9 149 38.3
MSTRG.9271 Avicennia marina HOM05D001053 ORTHO05D007087 1.8e-19 100.1 116 51.7
ECA232G0502 Erigeron canadensis HOM05D001053 ORTHO05D007087 1.8e-19 100.1 164 36.6
Thhalv10020421m.g Eutrema salsugineum HOM05D001053 ORTHO05D007087 1.8e-19 100.1 133 39.1
Glyma.05G012850 Glycine max HOM05D001053 ORTHO05D007087 2.3e-19 99.8 143 44.8
MBI13_g29986_MAGBIO Magnolia biondii HOM05D001053 ORTHO05D007087 3.0e-19 99.4 138 41.3
TPR.G26787 Trifolium pratense HOM05D001053 ORTHO05D007087 5.2e-19 98.6 134 42.5
Cfa019809 Carpinus fangiana HOM05D001053 ORTHO05D007087 6.8e-19 98.2 178 34.3
Lj5A145G38 Lonicera japonica HOM05D001053 ORTHO05D007087 6.8e-19 98.2 180 35.0
PSO478G0818 Papaver somniferum HOM05D001053 ORTHO05D007087 6.8e-19 98.2 107 46.7
arahy.Tifrunner.gnm1.ann1.YD5ENU Arachis hypogaea HOM05D001053 ORTHO05D007087 8.8e-19 97.8 137 42.3
BcaB06g25897 Brassica carinata HOM05D001053 ORTHO05D007087 8.8e-19 97.8 150 38.0
CARHR093900 Cardamine hirsuta HOM05D001053 ORTHO05D007087 8.8e-19 97.8 151 39.1
VMungo1215G0938 Vigna mungo HOM05D001053 ORTHO05D007087 2.0e-18 96.7 139 43.2
SMO356G0044 Selaginella moellendorffii HOM05D001053 ORTHO05D007087 2.6e-18 96.3 107 43.9
BcaC01g03696 Brassica carinata HOM05D001053 ORTHO05D007087 3.4e-18 95.9 102 48.0
C03p49480 Brassica napus HOM05D001053 ORTHO05D007087 3.4e-18 95.9 102 48.0
BolC3t17246H Brassica oleracea HOM05D001053 ORTHO05D007087 3.4e-18 95.9 102 48.0
Haze_18621 Corylus avellana HOM05D001053 ORTHO05D007087 3.4e-18 95.9 109 45.9
A05p31110 Brassica napus HOM05D001053 ORTHO05D007087 4.4e-18 95.5 151 37.1
BraA05t21952Z Brassica rapa HOM05D001053 ORTHO05D007087 4.4e-18 95.5 151 37.1
Glyma.17G120900 Glycine max HOM05D001053 ORTHO05D007087 4.4e-18 95.5 142 43.0
Os07g0164100 Oryza sativa ssp. japonica HOM05D001053 ORTHO05D007087 4.4e-18 95.5 126 37.3
Carub.0003s1831 Capsella rubella HOM05D001053 ORTHO05D007087 5.7e-18 95.1 147 36.7
BolC5t33437H Brassica oleracea HOM05D001053 ORTHO05D007087 9.8e-18 94.4 139 38.1
Lj4g0008764 Lotus japonicus HOM05D001053 ORTHO05D007087 3.7e-17 92.4 187 32.6
BcaC05g28608 Brassica carinata HOM05D001053 ORTHO05D007087 4.8e-17 92.0 139 37.4
C05p47110 Brassica napus HOM05D001053 ORTHO05D007087 4.8e-17 92.0 139 37.4
AL3G31840 Arabidopsis lyrata HOM05D001053 ORTHO05D007087 8.3e-17 91.3 132 38.6
Lalb_Chr07g0178611 Lupinus albus HOM05D001053 ORTHO05D007087 8.3e-17 91.3 134 39.6
Aa31LG8G5390 Aethionema arabicum HOM05D001053 ORTHO05D007087 2.4e-16 89.7 129 41.1
Ca_02540_v3 Cicer arietinum L. HOM05D001053 ORTHO05D007087 2.4e-16 89.7 133 41.4
AT3G18520 Arabidopsis thaliana HOM05D001053 ORTHO05D007087 3.1e-16 89.4 108 42.6
Migut.D01589 Erythranthe guttata HOM05D001053 ORTHO05D007087 1.2e-15 87.4 113 42.5
Zm00001eb300710 Zea mays HOM05D001053 ORTHO05D007087 2.0e-15 86.7 103 39.8
Mapoly0001s0348 Marchantia polymorpha HOM05D001053 ORTHO05D007087 2.9e-14 82.8 131 36.6
FAN08G3403 Fragaria x ananassa HOM05D001053 ORTHO05D007087 4.2e-13 79.0 173 33.5
CDE02G3243 Ceratophyllum demersum HOM05D001053 ORTHO05D007087 9.4e-13 77.8 68 54.4
Prupe.5G217800 Prunus persica HOM05D001053 ORTHO05D007087 6.8e-11 71.6 72 50.0
Lsat_1_v5_gn_1_63480 Lactuca sativa HOM05D001053 ORTHO05D007087 5.7e-10 68.6 73 42.5
arahy.Tifrunner.gnm1.ann1.XDJV4T Arachis hypogaea HOM05D001053 ORTHO05D007087 9.8e-10 67.8 132 37.9
SEGI_15820 Sequoiadendron giganteum HOM05D001053 ORTHO05D007087 2.2e-09 66.6 52 46.2
Pp3c3_19120 Physcomitrium patens HOM05D001053 ORTHO05D007087 2.4e-08 63.2 123 38.2
Rhsim08G0136600 Rhododendron simsii HOM05D001053 ORTHO05D007087 7.0e-08 61.6 80 47.5
Lsat_1_v5_gn_9_115261 Lactuca sativa HOM05D001053 ORTHO05D007087 4.5e-07 58.9 75 44.0
C03p44440 Brassica napus HOM05D012065 ORTHO05D014121 1.7e-06 57.0 106 36.8
AUR62036959 Chenopodium quinoa HOM05D001053 ORTHO05D007087 2.3e-06 56.6 83 39.8
Pp3c10_16170 Physcomitrium patens HOM05D001053 ORTHO05D007087 2.3e-06 56.6 111 36.0


User provided reference genes

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