Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013757 Vanilla planifolia HOM05D003925 ORTHO05D004832 3.1e-263 911.4 503 100.0
Hma1.2p1_0884F.1_g232530 Hydrangea macrophylla HOM05D003925 ORTHO05D004832 3.2e-135 486.1 516 57.4
Aqoxy5G03033 Aquilegia oxysepala HOM05D003925 ORTHO05D004832 4.2e-135 485.7 497 56.3
COL.COLO4_17737 Corchorus olitorius HOM05D003925 ORTHO05D004832 7.2e-135 485.0 485 57.9
Dinv19400 Davidia involucrata HOM05D003925 ORTHO05D004832 8.8e-133 478.0 503 54.1
Nn5g27797 Nelumbo nucifera HOM05D003925 ORTHO05D004832 7.5e-132 474.9 499 53.5
Duzib052G0643 Durio zibethinus HOM05D003925 ORTHO05D004832 1.4e-130 470.7 495 59.0
CDE08G0951 Ceratophyllum demersum HOM05D003925 ORTHO05D004832 2.4e-130 469.9 508 52.8
Lsat_1_v5_gn_7_76521 Lactuca sativa HOM05D003925 ORTHO05D004832 4.1e-130 469.2 495 53.1
SGA_v2.0_scaffold42G15910 Striga asiatica HOM05D003925 ORTHO05D004832 4.1e-130 469.2 499 54.1
Migut.N00826 Erythranthe guttata HOM05D003925 ORTHO05D004832 3.5e-129 466.1 498 55.8
Manes.07G023200 Manihot esculenta HOM05D003925 ORTHO05D004832 3.5e-129 466.1 485 57.5
PGSC0003DMG400024923 Solanum tuberosum HOM05D003925 ORTHO05D004832 3.5e-129 466.1 491 56.8
SalBow3G3816 Salvia bowleyana HOM05D003925 ORTHO05D004832 7.7e-129 464.9 496 56.7
Duzib132G1049 Durio zibethinus HOM05D003925 ORTHO05D004832 1.3e-128 464.2 485 55.5
Nn1g08458 Nelumbo nucifera HOM05D003925 ORTHO05D004832 1.3e-128 464.2 490 54.5
Thecc.02G024000 Theobroma cacao HOM05D003925 ORTHO05D004832 5.0e-128 462.2 484 58.5
Zm00001eb348650 Zea mays HOM05D003925 ORTHO05D004832 5.0e-128 462.2 391 62.1
Gorai.002G216100 Gossypium raimondii HOM05D003925 ORTHO05D004832 8.5e-128 461.5 477 57.4
DCAR_006681 Daucus carota HOM05D003925 ORTHO05D004832 1.1e-127 461.1 487 52.6
MSTRG.5212 Avicennia marina HOM05D003925 ORTHO05D004832 1.9e-127 460.3 495 54.1
CAN.G798.55 Capsicum annuum HOM05D003925 ORTHO05D004832 1.9e-127 460.3 494 56.3
TAR381G0375 Trochodendron aralioides HOM05D003925 ORTHO05D004832 1.9e-127 460.3 499 53.1
Gohir.A04G132700 Gossypium hirsutum HOM05D003925 ORTHO05D004832 3.2e-127 459.5 479 54.9
Zm00001eb289240 Zea mays HOM05D003925 ORTHO05D004832 3.2e-127 459.5 470 58.5
Gohir.D01G174000 Gossypium hirsutum HOM05D003925 ORTHO05D004832 4.2e-127 459.1 477 57.2
MD08G1240800 Malus domestica HOM05D003925 ORTHO05D004832 1.6e-126 457.2 489 58.7
unitig_26.g9028 Utricularia gibba HOM05D003925 ORTHO05D005835 1.6e-126 457.2 487 55.2
MSTRG.16495 Avicennia marina HOM05D003925 ORTHO05D004832 2.7e-126 456.4 494 55.1
Actinidia00183 Actinidia chinensis HOM05D003925 ORTHO05D004832 6.1e-126 455.3 496 53.4
CSS0002231 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 6.1e-126 455.3 503 53.1
Oeu023407.1 Olea europaea HOM05D003925 ORTHO05D004832 6.1e-126 455.3 501 54.1
Sc07g0004570 Simmondsia chinensis HOM05D003925 ORTHO05D004832 8.0e-126 454.9 491 54.0
HanXRQChr07g0187361 Helianthus annuus HOM05D003925 ORTHO05D004832 3.0e-125 453.0 495 55.4
Medtr2g005930 Medicago truncatula HOM05D003925 ORTHO05D004832 3.0e-125 453.0 478 55.2
Cpa.g.sc30.25 Carica papaya HOM05D003925 ORTHO05D004832 1.2e-124 451.1 493 55.2
Psat1g223280 Pisum sativum HOM05D003925 ORTHO05D004832 1.5e-124 450.7 480 57.5
Actinidia39010 Actinidia chinensis HOM05D003925 ORTHO05D004832 2.6e-124 449.9 494 54.0
Glyma.12G167500 Glycine max HOM05D003925 ORTHO05D004832 2.6e-124 449.9 482 55.0
Prupe.1G577500 Prunus persica HOM05D003925 ORTHO05D004832 2.6e-124 449.9 401 60.8
Haze_10061 Corylus avellana HOM05D003925 ORTHO05D004832 3.4e-124 449.5 500 53.0
Gorai.012G167900 Gossypium raimondii HOM05D003925 ORTHO05D004832 3.4e-124 449.5 483 54.2
PGR142G2211 Punica granatum HOM05D003925 ORTHO05D004832 3.4e-124 449.5 492 52.8
Hund15482 Selenicereus undatus HOM05D003925 ORTHO05D004832 4.4e-124 449.1 496 53.2
Solyc01g103680.3 Solanum lycopersicum HOM05D003925 ORTHO05D004832 9.8e-124 448.0 491 56.0
Manes.10G119400 Manihot esculenta HOM05D003925 ORTHO05D004832 1.3e-123 447.6 497 56.5
Gohir.D04G176300 Gossypium hirsutum HOM05D003925 ORTHO05D004832 1.7e-123 447.2 479 54.1
Lsat_1_v5_gn_9_121141 Lactuca sativa HOM05D003925 ORTHO05D004832 3.7e-123 446.0 486 55.3
TWI23G0121 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 3.7e-123 446.0 468 54.1
THA.LOC104799820 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 1.1e-122 444.5 472 54.2
Sopen01g046090 Solanum pennellii HOM05D003925 ORTHO05D004832 1.8e-122 443.7 494 55.3
Nitab4.5_0000948g0030 Nicotiana tabacum HOM05D003925 ORTHO05D004832 5.4e-122 442.2 493 55.0
TPR.G2147 Trifolium pratense HOM05D003925 ORTHO05D004832 7.0e-122 441.8 477 56.2
Phvul.006G218500 Phaseolus vulgaris HOM05D003925 ORTHO05D004832 9.1e-122 441.4 451 55.2
HanXRQChr06g0181341 Helianthus annuus HOM05D003925 ORTHO05D004832 2.0e-121 440.3 501 53.1
VMungo0540G0371 Vigna mungo HOM05D003925 ORTHO05D004832 2.7e-121 439.9 479 57.0
Ciclev10000945m.g Citrus clementina HOM05D003925 ORTHO05D004832 3.5e-121 439.5 466 55.2
Lj6g0026503 Lotus japonicus HOM05D003925 ORTHO05D004832 7.7e-121 438.3 451 57.2
Nitab4.5_0002596g0090 Nicotiana tabacum HOM05D003925 ORTHO05D004832 7.7e-121 438.3 497 54.5
CARHR231760 Cardamine hirsuta HOM05D003925 ORTHO05D004832 1.7e-120 437.2 473 53.3
Glyma.16G003600 Glycine max HOM05D003925 ORTHO05D004832 1.7e-120 437.2 461 54.2
Actinidia26166 Actinidia chinensis HOM05D003925 ORTHO05D004832 2.9e-120 436.4 505 50.9
MD15G1434000 Malus domestica HOM05D003925 ORTHO05D004832 1.5e-119 434.1 487 56.9
PSO170G6240 Papaver somniferum HOM05D003925 ORTHO05D004832 2.5e-119 433.3 488 54.5
Lj5C262G4 Lonicera japonica HOM05D003925 ORTHO05D005835 3.3e-119 433.0 386 59.3
ECA240G1679 Erigeron canadensis HOM05D003925 ORTHO05D004832 5.5e-119 432.2 487 52.4
vmacro19868 Vaccinium macrocarpon HOM05D003925 ORTHO05D004832 5.5e-119 432.2 490 56.7
Actinidia06473 Actinidia chinensis HOM05D003925 ORTHO05D004832 1.2e-118 431.0 489 53.6
AUR62040618 Chenopodium quinoa HOM05D003925 ORTHO05D004832 1.2e-118 431.0 457 53.8
FAN04G1563 Fragaria x ananassa HOM05D003925 ORTHO05D004832 1.2e-118 431.0 399 60.4
RcHm_v2.0_Chr7g0220701 Rosa chinensis HOM05D003925 ORTHO05D004832 1.2e-118 431.0 385 60.5
Carub.0007s1672 Capsella rubella HOM05D003925 ORTHO05D004832 1.6e-118 430.6 462 53.0
Os05g0432400 Oryza sativa ssp. japonica HOM05D003925 ORTHO05D004832 1.6e-118 430.6 385 63.1
Sed0019914 Sechium edule HOM05D003925 ORTHO05D004832 1.6e-118 430.6 420 56.0
ATR0584G077 Amborella trichopoda HOM05D003925 ORTHO05D004832 2.1e-118 430.3 506 53.0
Thhalv10024818m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 2.1e-118 430.3 463 54.2
FvH4_5g28340 Fragaria vesca HOM05D003925 ORTHO05D004832 2.1e-118 430.3 481 54.5
Gohir.A01G182900 Gossypium hirsutum HOM05D003925 ORTHO05D004832 2.1e-118 430.3 483 54.7
Peaxi162Scf00011g00941 Petunia axillaris HOM05D003925 ORTHO05D004832 2.8e-118 429.9 488 54.1
SEGI_07809 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 2.8e-118 429.9 491 50.3
CiPaw.05G005700 Carya illinoinensis HOM05D003925 ORTHO05D004832 4.7e-118 429.1 488 54.7
Potri.004G223000 Populus trichocarpa HOM05D003925 ORTHO05D004832 6.1e-118 428.7 491 54.2
CiPaw.06G173300 Carya illinoinensis HOM05D003925 ORTHO05D004832 8.0e-118 428.3 493 54.4
QL02p100243 Quercus lobata HOM05D003925 ORTHO05D004832 1.0e-117 427.9 429 55.2
Ah.03g136840 Amaranthus hybridus HOM05D003925 ORTHO05D004832 1.8e-117 427.2 488 51.8
Sabra01G0168900 Salix brachista HOM05D003925 ORTHO05D004832 2.3e-117 426.8 463 55.5
TWI14G0879 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 2.3e-117 426.8 399 57.6
Aa31LG4G9470 Aethionema arabicum HOM05D003925 ORTHO05D004832 5.2e-117 425.6 488 52.0
PSO782G4904 Papaver somniferum HOM05D003925 ORTHO05D004832 5.2e-117 425.6 489 53.8
Sp6g11590 Schrenkiella parvula HOM05D003925 ORTHO05D004832 3.4e-116 422.9 464 54.3
Cfa004507 Carpinus fangiana HOM05D003925 ORTHO05D005835 4.4e-116 422.5 391 62.4
AUR62041951 Chenopodium quinoa HOM05D003925 ORTHO05D004832 2.8e-115 419.9 414 56.8
Oeu000132.1 Olea europaea HOM05D003925 ORTHO05D004832 3.7e-115 419.5 515 51.1
EL10Ac6g14144 Beta vulgaris HOM05D003925 ORTHO05D004832 4.9e-115 419.1 485 51.5
Lalb_Chr15g0090731 Lupinus albus HOM05D003925 ORTHO05D004832 4.9e-115 419.1 476 53.6
Atru.chr6.781 Acer truncatum HOM05D003925 ORTHO05D004832 6.3e-115 418.7 476 53.8
FAN18G2864 Fragaria x ananassa HOM05D003925 ORTHO05D004832 1.8e-114 417.2 495 52.5
arahy.Tifrunner.gnm1.ann1.0HG9JC Arachis hypogaea HOM05D003925 ORTHO05D004832 3.1e-114 416.4 484 53.7
THA.LOC104800040 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 3.1e-114 416.4 497 53.3
Dinv07476 Davidia involucrata HOM05D003925 ORTHO05D005835 1.6e-113 414.1 414 56.0
BraA03t11971Z Brassica rapa HOM05D003925 ORTHO05D004832 3.5e-113 412.9 482 52.5
Eucgr.L02024 Eucalyptus grandis HOM05D003925 ORTHO05D004832 4.5e-113 412.5 393 60.1
Eucgr.I02754 Eucalyptus grandis HOM05D003925 ORTHO05D004832 5.9e-113 412.1 495 54.9
HanXRQChr16g0509421 Helianthus annuus HOM05D003925 ORTHO05D004832 5.9e-113 412.1 494 49.4
Atru.chr6.812 Acer truncatum HOM05D003925 ORTHO05D004832 7.8e-113 411.8 479 54.1
AT4G24330 Arabidopsis thaliana HOM05D003925 ORTHO05D004832 1.0e-112 411.4 461 54.2
BolC1t01894H Brassica oleracea HOM05D003925 ORTHO05D004832 1.3e-112 411.0 478 55.4
CANSAT54G0877 Cannabis sativa HOM05D003925 ORTHO05D004832 1.7e-112 410.6 487 51.3
MBI09_g03430_MAGBIO Magnolia biondii HOM05D003925 ORTHO05D004832 2.3e-112 410.2 497 52.1
A01p15700 Brassica napus HOM05D003925 ORTHO05D004832 2.9e-112 409.8 483 53.8
C01p19670 Brassica napus HOM05D003925 ORTHO05D004832 2.9e-112 409.8 478 55.2
CDE06G0202 Ceratophyllum demersum HOM05D003925 ORTHO05D004832 3.8e-112 409.5 504 48.4
BraA01t01508Z Brassica rapa HOM05D003925 ORTHO05D004832 5.0e-112 409.1 485 54.8
Rhsim11G0124300 Rhododendron simsii HOM05D003925 ORTHO05D004832 5.0e-112 409.1 491 49.9
BcaNung05636 Brassica carinata HOM05D003925 ORTHO05D004832 1.1e-111 407.9 464 54.1
vmacro01723 Vaccinium macrocarpon HOM05D003925 ORTHO05D004832 4.3e-111 406.0 402 54.5
AL7G28890 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 9.5e-111 404.8 461 53.8
BcaC01g04841 Brassica carinata HOM05D003925 ORTHO05D004832 1.2e-110 404.4 455 53.2
MELO3C016507.2 Cucumis melo HOM05D003925 ORTHO05D004832 2.1e-110 403.7 409 57.2
C07p53570 Brassica napus HOM05D003925 ORTHO05D004832 2.8e-110 403.3 501 50.7
arahy.Tifrunner.gnm1.ann1.D6FTCL Arachis hypogaea HOM05D003925 ORTHO05D004832 6.1e-110 402.1 483 52.4
Sp7g22330 Schrenkiella parvula HOM05D003925 ORTHO05D004832 8.0e-110 401.7 460 53.5
ClCG10G007000 Citrullus lanatus HOM05D003925 ORTHO05D004832 5.2e-109 399.1 492 51.8
BolC3t15651H Brassica oleracea HOM05D003925 ORTHO05D004832 1.2e-108 397.9 484 50.2
C03p33290 Brassica napus HOM05D003925 ORTHO05D004832 2.6e-108 396.7 481 50.5
A03p55280 Brassica napus HOM05D003925 ORTHO05D004832 4.4e-108 396.0 463 53.6
BolC7t45848H Brassica oleracea HOM05D003925 ORTHO05D004832 2.2e-107 393.7 479 51.1
Aa31LG3G6740 Aethionema arabicum HOM05D003925 ORTHO05D004832 2.9e-107 393.3 497 48.9
Ca_00045_v3 Cicer arietinum L. HOM05D003925 ORTHO05D004832 3.7e-107 392.9 448 56.5
BcaB01g02930 Brassica carinata HOM05D003925 ORTHO05D004832 1.4e-106 391.0 458 53.9
CSS0020156 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 1.4e-106 391.0 444 50.9
Carub.0008s0983 Capsella rubella HOM05D003925 ORTHO05D004832 1.4e-106 391.0 481 49.7
A03p27580 Brassica napus HOM05D003925 ORTHO05D004832 9.2e-106 388.3 482 50.6
CsaV3_3G006350 Cucumis sativus L. HOM05D003925 ORTHO05D004832 9.2e-106 388.3 499 50.1
BraA03t14587Z Brassica rapa HOM05D003925 ORTHO05D004832 2.7e-105 386.7 337 64.4
BcaC06g32885 Brassica carinata HOM05D003925 ORTHO05D004832 1.0e-104 384.8 337 63.8
Eucgr.L02026 Eucalyptus grandis HOM05D003925 ORTHO05D004832 3.0e-104 383.3 319 62.7
Thhalv10013427m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 6.6e-104 382.1 479 49.1
AL8G23900 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 5.6e-103 379.0 490 49.8
AT5G49945 Arabidopsis thaliana HOM05D003925 ORTHO05D004832 2.8e-102 376.7 475 49.3
CARHR258770 Cardamine hirsuta HOM05D003925 ORTHO05D004832 2.3e-101 373.6 483 47.8
Mapoly0037s0012 Marchantia polymorpha HOM05D003925 ORTHO05D004832 2.3e-101 373.6 513 45.0
CSS0030901 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 2.9e-99 366.7 402 53.5
Lj9C300G1 Lonicera japonica HOM05D003925 ORTHO05D004832 8.6e-96 355.1 447 48.1
SGA_v2.0_scaffold8G04435 Striga asiatica HOM05D003925 ORTHO05D004832 6.2e-94 349.0 421 53.0
CARHR231750 Cardamine hirsuta HOM05D003925 ORTHO05D004832 1.2e-92 344.7 280 62.1
SMO356G0110 Selaginella moellendorffii HOM05D003925 ORTHO05D004832 2.7e-89 333.6 387 50.6
Pp3c5_6620 Physcomitrium patens HOM05D003925 ORTHO05D004832 1.3e-83 314.7 482 40.0
ECA236G3450 Erigeron canadensis HOM05D003925 ORTHO05D004832 1.7e-80 304.3 460 42.0
BcaC09g50878 Brassica carinata HOM05D003925 ORTHO05D004832 3.1e-77 293.5 271 63.8
SEGI_11230 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 5.1e-72 276.2 345 47.2
Cc02_g23030 Coffea canephora HOM05D003925 ORTHO05D004832 3.5e-57 226.9 193 63.7
AagrBONN_evm.TU.Sc2ySwM_362.431 Anthoceros agrestis HOM05D003925 ORTHO05D004832 1.3e-54 218.4 368 40.5
CBR_g4722 Chara braunii HOM05D003925 ORTHO05D004832 3.1e-53 213.8 452 34.1
GSVIVG01023266001 Vitis vinifera HOM05D003925 ORTHO05D004832 2.0e-52 211.1 195 62.6
SHI34757 Sapria himalayana HOM05D003925 ORTHO05D004832 6.5e-43 179.5 200 49.0
SEGI_10393 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 6.9e-37 159.5 147 57.1
CSS0013131 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 2.7e-33 147.5 137 61.3
Migut.B00784 Erythranthe guttata HOM05D003925 ORTHO05D004832 6.1e-33 146.4 129 69.8
CSS0019842 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 9.7e-31 139.0 129 61.2
Cre02.g106300 Chlamydomonas reinhardtii HOM05D003925 ORTHO05D004832 1.3e-30 138.7 339 32.4
BcaC01g04842 Brassica carinata HOM05D003925 ORTHO05D004832 1.4e-29 135.2 110 59.1
Haze_10058 Corylus avellana HOM05D003925 ORTHO05D004832 1.8e-29 134.8 145 56.6
CAN.G697.8 Capsicum annuum HOM05D003925 ORTHO05D004832 1.5e-28 131.7 118 53.4
Lalb_Chr20g0123671 Lupinus albus HOM05D003925 ORTHO05D004832 1.2e-25 122.1 100 58.0
Zm00001eb254380 Zea mays HOM05D002934 ORTHO05D004560 9.7e-23 112.5 123 51.2
Zm00001eb276420 Zea mays HOM05D002934 ORTHO05D004560 9.7e-23 112.5 123 51.2
MCO13G620 Micromonas commoda HOM05D003925 ORTHO05D004832 8.2e-22 109.4 351 26.2
Lj6g0024462 Lotus japonicus HOM05D003925 ORTHO05D004832 8.5e-19 99.4 317 30.3
CARHR216310 Cardamine hirsuta HOM05D003925 ORTHO05D004832 1.8e-16 91.7 100 51.0
CAN.G386.33 Capsicum annuum HOM05D003925 ORTHO05D004832 8.5e-11 72.8 66 45.5
CAN.G963.3 Capsicum annuum HOM05D003925 ORTHO05D004832 1.4e-08 65.5 62 48.4
AL3G33580 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 6.8e-08 63.2 133 32.3


User provided reference genes

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