Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011330 Vanilla planifolia HOM05D003625 ORTHO05D004382 5.5e-136 487.6 250 100.0
TAR365G1186 Trochodendron aralioides HOM05D003625 ORTHO05D004382 5.7e-32 142.1 205 43.4
Aqoxy2G00575 Aquilegia oxysepala HOM05D003625 ORTHO05D004382 1.6e-29 134.0 211 42.7
MBI19_g35956_MAGBIO Magnolia biondii HOM05D003625 ORTHO05D004382 5.9e-29 132.1 138 55.1
ATR0626G050 Amborella trichopoda HOM05D003625 ORTHO05D004382 2.9e-28 129.8 117 62.4
CDE05G3415 Ceratophyllum demersum HOM05D003625 ORTHO05D004382 1.1e-27 127.9 113 60.2
CSS0005803 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 1.9e-27 127.1 190 43.7
Oeu022807.1 Olea europaea HOM05D003625 ORTHO05D004382 5.5e-27 125.6 116 55.2
PGR044G2464 Punica granatum HOM05D003625 ORTHO05D004382 5.5e-27 125.6 152 48.7
Ciclev10018730m.g Citrus clementina HOM05D003625 ORTHO05D004382 1.6e-26 124.0 135 54.1
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 4.7e-26 122.5 97 67.0
CSS0041154 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 8.0e-26 121.7 119 55.5
Dinv32982 Davidia involucrata HOM05D003625 ORTHO05D004382 8.0e-26 121.7 94 67.0
CsaV3_1G033940 Cucumis sativus L. HOM05D003625 ORTHO05D004382 1.0e-25 121.3 214 39.3
SGA_v2.0_scaffold1G00428 Striga asiatica HOM05D003625 ORTHO05D004382 1.0e-25 121.3 129 51.9
Potri.002G213400 Populus trichocarpa HOM05D003625 ORTHO05D004382 1.4e-25 120.9 88 70.5
Potri.014G135700 Populus trichocarpa HOM05D003625 ORTHO05D004382 1.4e-25 120.9 93 66.7
Sabra02G0149300 Salix brachista HOM05D003625 ORTHO05D004382 2.3e-25 120.2 88 70.5
TWI59G0316 Tripterygium wilfordii HOM05D003625 ORTHO05D004382 3.0e-25 119.8 134 53.7
vmacro02517 Vaccinium macrocarpon HOM05D003625 ORTHO05D004382 4.0e-25 119.4 94 67.0
CAN.G426.9 Capsicum annuum HOM05D003625 ORTHO05D004382 5.2e-25 119.0 164 45.7
MSTRG.18201 Avicennia marina HOM05D003625 ORTHO05D004382 8.8e-25 118.2 143 49.0
Hma1.2p1_0209F.1_g089230 Hydrangea macrophylla HOM05D003625 ORTHO05D004382 8.8e-25 118.2 95 63.2
Duzib213G0855 Durio zibethinus HOM05D003625 ORTHO05D004382 1.2e-24 117.9 174 43.7
Duzib170G0264 Durio zibethinus HOM05D003625 ORTHO05D004382 1.5e-24 117.5 135 50.4
Thecc.07G010400 Theobroma cacao HOM05D003625 ORTHO05D004382 1.5e-24 117.5 168 45.2
COL.COLO4_09853 Corchorus olitorius HOM05D003625 ORTHO05D004382 2.6e-24 116.7 166 44.6
Atru.chr5.1298 Acer truncatum HOM05D003625 ORTHO05D004382 3.3e-24 116.3 128 52.3
Dinv11285 Davidia involucrata HOM05D003625 ORTHO05D004382 4.4e-24 115.9 111 57.7
Lj2A1183G17 Lonicera japonica HOM05D003625 ORTHO05D004382 9.7e-24 114.8 170 41.2
CANSAT25G1777 Cannabis sativa HOM05D003625 ORTHO05D004382 1.7e-23 114.0 95 61.1
CiPaw.13G100200 Carya illinoinensis HOM05D003625 ORTHO05D004382 1.7e-23 114.0 93 64.5
Sopen09g029170 Solanum pennellii HOM05D003625 ORTHO05D004382 1.7e-23 114.0 227 38.3
Nitab4.5_0001651g0100 Nicotiana tabacum HOM05D003625 ORTHO05D004382 2.2e-23 113.6 175 44.0
Manes.03G013700 Manihot esculenta HOM05D003625 ORTHO05D004382 2.8e-23 113.2 154 45.5
Gohir.A04G004900 Gossypium hirsutum HOM05D003625 ORTHO05D004382 4.8e-23 112.5 168 42.3
Solyc09g074330.3 Solanum lycopersicum HOM05D003625 ORTHO05D004382 4.8e-23 112.5 187 42.2
Gorai.009G451700 Gossypium raimondii HOM05D003625 ORTHO05D004382 6.3e-23 112.1 168 42.3
Gohir.D05G385000 Gossypium hirsutum HOM05D003625 ORTHO05D004382 8.2e-23 111.7 168 42.3
Cc01_g20080 Coffea canephora HOM05D003625 ORTHO05D004382 1.1e-22 111.3 157 44.6
DCAR_002782 Daucus carota HOM05D003625 ORTHO05D004382 1.1e-22 111.3 128 48.4
unitig_0.g1186 Utricularia gibba HOM05D003625 ORTHO05D004382 1.4e-22 110.9 92 60.9
Cfa011439 Carpinus fangiana HOM05D003625 ORTHO05D004382 2.4e-22 110.2 90 63.3
Sc17g0003680 Simmondsia chinensis HOM05D003625 ORTHO05D004382 2.4e-22 110.2 107 57.0
Duzib268G0343 Durio zibethinus HOM05D003625 ORTHO05D004382 3.1e-22 109.8 123 52.8
MD02G1277900 Malus domestica HOM05D003625 ORTHO05D004382 5.3e-22 109.0 162 43.2
EL10Ac7g17149 Beta vulgaris HOM05D003625 ORTHO05D004382 9.1e-22 108.2 139 46.0
arahy.Tifrunner.gnm1.ann1.AN8C0D Arachis hypogaea HOM05D003625 ORTHO05D004382 1.6e-21 107.5 124 48.4
arahy.Tifrunner.gnm1.ann1.DI3WFZ Arachis hypogaea HOM05D003625 ORTHO05D004382 1.6e-21 107.5 124 48.4
Prupe.8G250800 Prunus persica HOM05D003625 ORTHO05D004382 2.0e-21 107.1 165 43.0
Prupe.8G267900 Prunus persica HOM05D003625 ORTHO05D004382 2.0e-21 107.1 165 43.0
Ca_01349_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 2.7e-21 106.7 93 60.2
Ca_01352_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 2.7e-21 106.7 93 60.2
QL01p033546 Quercus lobata HOM05D003625 ORTHO05D004382 2.7e-21 106.7 93 60.2
THA.LOC104801203 Tarenaya hassleriana HOM05D003625 ORTHO05D004382 2.7e-21 106.7 141 46.1
AUR62034443 Chenopodium quinoa HOM05D003625 ORTHO05D004382 7.7e-21 105.1 92 57.6
GSVIVG01011024001 Vitis vinifera HOM05D003625 ORTHO05D004382 1.0e-20 104.8 221 35.3
Cpa.g.sc60.39 Carica papaya HOM05D003625 ORTHO05D004382 1.3e-20 104.4 99 55.6
Lalb_Chr22g0350011 Lupinus albus HOM05D003625 ORTHO05D004382 1.7e-20 104.0 158 43.0
RcHm_v2.0_Chr6g0292351 Rosa chinensis HOM05D003625 ORTHO05D004382 1.7e-20 104.0 171 39.2
HanXRQChr05g0150041 Helianthus annuus HOM05D003625 ORTHO05D004382 2.2e-20 103.6 87 65.5
ECA236G1413 Erigeron canadensis HOM05D003625 ORTHO05D004382 3.8e-20 102.8 86 65.1
FAN15G0592 Fragaria x ananassa HOM05D003625 ORTHO05D004382 5.0e-20 102.4 187 38.0
Psat5g282480 Pisum sativum HOM05D003625 ORTHO05D004382 8.5e-20 101.7 157 42.7
Cfa006055 Carpinus fangiana HOM05D003625 ORTHO05D006197 1.1e-19 101.3 124 47.6
Haze_04796 Corylus avellana HOM05D003625 ORTHO05D004382 1.5e-19 100.9 194 36.6
CiPaw.08G101000 Carya illinoinensis HOM05D003625 ORTHO05D004382 1.9e-19 100.5 144 42.4
Glyma.13G332300 Glycine max HOM05D003625 ORTHO05D004382 1.9e-19 100.5 173 40.5
FAN20G2140 Fragaria x ananassa HOM05D003625 ORTHO05D004382 2.5e-19 100.1 100 55.0
Sabra14G0102100 Salix brachista HOM05D003625 ORTHO05D004382 3.2e-19 99.8 172 40.1
FvH4_2g24490 Fragaria vesca HOM05D003625 ORTHO05D004382 4.2e-19 99.4 232 35.8
FAN24G2516 Fragaria x ananassa HOM05D003625 ORTHO05D004382 4.2e-19 99.4 232 35.8
FAN27G0529 Fragaria x ananassa HOM05D003625 ORTHO05D004382 4.2e-19 99.4 100 55.0
Glyma.15G042000 Glycine max HOM05D003625 ORTHO05D004382 4.2e-19 99.4 218 35.8
Ah.04g162700 Amaranthus hybridus HOM05D003625 ORTHO05D004382 5.5e-19 99.0 90 55.6
arahy.Tifrunner.gnm1.ann1.6HBC95 Arachis hypogaea HOM05D003625 ORTHO05D004382 7.2e-19 98.6 147 45.6
arahy.Tifrunner.gnm1.ann1.E19P6N Arachis hypogaea HOM05D003625 ORTHO05D004382 7.2e-19 98.6 147 45.6
Medtr2g096290 Medicago truncatula HOM05D003625 ORTHO05D004382 9.4e-19 98.2 91 58.2
QL93p2003_0013 Quercus lobata HOM05D003625 ORTHO05D004382 9.4e-19 98.2 148 43.2
QL12p023448 Quercus lobata HOM05D003625 ORTHO05D004382 1.2e-18 97.8 99 52.5
SalBow3G1663 Salvia bowleyana HOM05D003625 ORTHO05D004382 1.6e-18 97.4 107 51.4
PSO407G0030 Papaver somniferum HOM05D003625 ORTHO05D004382 2.1e-18 97.1 126 49.2
Aa31LG5G2610 Aethionema arabicum HOM05D003625 ORTHO05D004382 2.7e-18 96.7 165 40.6
VMungo1080G0322 Vigna mungo HOM05D003625 ORTHO05D004382 2.7e-18 96.7 136 46.3
PSO170G6480 Papaver somniferum HOM05D003625 ORTHO05D004382 3.6e-18 96.3 151 41.1
Phvul.L001843 Phaseolus vulgaris HOM05D003625 ORTHO05D004382 8.0e-18 95.1 136 45.6
Nn3g21233 Nelumbo nucifera HOM05D003625 ORTHO05D004382 1.0e-17 94.7 89 59.6
Ca_19197_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 1.4e-17 94.4 134 47.0
MELO3C020662.2 Cucumis melo HOM05D003625 ORTHO05D004382 1.4e-17 94.4 227 34.8
HanXRQChr06g0164001 Helianthus annuus HOM05D003625 ORTHO05D004382 1.4e-17 94.4 90 57.8
Eucgr.C03805 Eucalyptus grandis HOM05D003625 ORTHO05D004382 1.8e-17 94.0 147 42.9
BcaB01g01983 Brassica carinata HOM05D003625 ORTHO05D004382 2.3e-17 93.6 158 40.5
BolC9t53180H Brassica oleracea HOM05D003625 ORTHO05D004382 2.3e-17 93.6 158 40.5
Nitab4.5_0010231g0010 Nicotiana tabacum HOM05D003625 ORTHO05D004382 2.3e-17 93.6 175 40.0
Lalb_Chr01g0003851 Lupinus albus HOM05D003625 ORTHO05D004382 4.0e-17 92.8 118 50.0
C09p02500 Brassica napus HOM05D003625 ORTHO05D004382 5.2e-17 92.4 156 39.7
Lj3g0001853 Lotus japonicus HOM05D003625 ORTHO05D004382 5.2e-17 92.4 180 41.1
Carub.0006s3397 Capsella rubella HOM05D003625 ORTHO05D004382 8.8e-17 91.7 109 52.3
Lj3g0005082 Lotus japonicus HOM05D003625 ORTHO05D004382 8.8e-17 91.7 79 58.2
A09p02400 Brassica napus HOM05D003625 ORTHO05D004382 1.2e-16 91.3 188 36.7
BraA09t35887Z Brassica rapa HOM05D003625 ORTHO05D004382 1.2e-16 91.3 188 36.7
AT4G03090 Arabidopsis thaliana HOM05D003625 ORTHO05D004382 1.5e-16 90.9 109 50.5
BcaB01g01939 Brassica carinata HOM05D003625 ORTHO05D004382 2.6e-16 90.1 183 37.2
Lsat_1_v5_gn_5_189721 Lactuca sativa HOM05D003625 ORTHO05D004382 2.6e-16 90.1 151 41.7
AL6G49860 Arabidopsis lyrata HOM05D003625 ORTHO05D004382 3.4e-16 89.7 109 49.5
Peaxi162Scf00006g03621 Petunia axillaris HOM05D003625 ORTHO05D004382 3.4e-16 89.7 195 34.4
Mapoly0033s0004 Marchantia polymorpha HOM05D003625 ORTHO05D004382 4.4e-16 89.4 98 56.1
Pp3c15_10800 Physcomitrium patens HOM05D003625 ORTHO05D004382 4.4e-16 89.4 93 50.5
Sp6g03120 Schrenkiella parvula HOM05D003625 ORTHO05D004382 5.7e-16 89.0 144 43.8
Zm00001eb115530 Zea mays HOM05D003625 ORTHO05D037860 1.3e-15 87.8 86 53.5
Thhalv10028409m.g Eutrema salsugineum HOM05D003625 ORTHO05D004382 2.2e-15 87.0 109 49.5
CARHR251510 Cardamine hirsuta HOM05D003625 ORTHO05D004382 2.8e-15 86.7 160 35.6
Zm00001eb115560 Zea mays HOM05D003625 ORTHO05D037860 4.8e-15 85.9 85 52.9
Pp3c9_3000 Physcomitrium patens HOM05D003625 ORTHO05D004382 8.3e-15 85.1 99 46.5
SMO271G0139 Selaginella moellendorffii HOM05D003625 ORTHO05D004382 8.3e-15 85.1 89 51.7
Haze_24022 Corylus avellana HOM05D003625 ORTHO05D004382 1.1e-14 84.7 71 60.6
Ca_31206_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 1.2e-13 81.3 68 61.8
C02p39820 Brassica napus HOM05D003625 ORTHO05D004382 4.5e-13 79.3 74 51.4
AagrBONN_evm.TU.Sc2ySwM_228.4764 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.3e-12 77.8 71 56.3
TPR.G34304 Trifolium pratense HOM05D003625 ORTHO05D004382 1.3e-12 77.8 144 38.9
A02p25090 Brassica napus HOM05D003625 ORTHO05D004382 2.3e-12 77.0 74 50.0
BraA02t07497Z Brassica rapa HOM05D003625 ORTHO05D004382 2.3e-12 77.0 74 50.0
Medtr4g063030 Medicago truncatula HOM05D003625 ORTHO05D004382 2.5e-11 73.6 173 32.4
Psat7g219280 Pisum sativum HOM05D003625 ORTHO05D004382 1.6e-10 70.9 164 35.4
Zm00001eb165880 Zea mays HOM05D003625 ORTHO05D004382 4.7e-10 69.3 76 50.0
SHI14627 Sapria himalayana HOM05D003625 ORTHO05D004382 6.1e-10 68.9 161 37.3
DCAR_005834 Daucus carota HOM05D003625 ORTHO05D004382 4.0e-09 66.2 98 38.8
Sed0013189 Sechium edule HOM05D003625 ORTHO05D004382 4.0e-09 66.2 102 39.2
Zm00001eb115600 Zea mays HOM05D003625 ORTHO05D004382 8.8e-09 65.1 73 47.9
BolC9t54863H Brassica oleracea HOM05D000096 ORTHO05D000045 2.6e-08 63.5 74 37.8
AUR62036671 Chenopodium quinoa HOM05D003625 ORTHO05D004382 9.8e-08 61.6 59 52.5
Lsat_1_v5_gn_8_55721 Lactuca sativa HOM05D003625 ORTHO05D004382 6.3e-07 58.9 93 43.0
MELO3C027569.2 Cucumis melo HOM05D011664 ORTHO05D015088 5.4e-06 55.8 53 58.5


User provided reference genes

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