Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011301 Vanilla planifolia HOM05D006106 ORTHO05D007662 4.3e-193 679.1 837 100.0
HPP92_011279 Vanilla planifolia HOM05D006106 ORTHO05D007662 8.6e-125 452.2 818 90.2
Nn7g36310 Nelumbo nucifera HOM05D006106 ORTHO05D007662 3.8e-64 250.8 351 74.4
TWI74G1340 Tripterygium wilfordii HOM05D006106 ORTHO05D007662 1.1e-60 239.2 324 78.7
Sopen04g007960 Solanum pennellii HOM05D006106 ORTHO05D007662 1.5e-60 238.8 335 74.3
GSVIVG01033271001 Vitis vinifera HOM05D006106 ORTHO05D007662 1.5e-60 238.8 339 75.5
Sc13g0001690 Simmondsia chinensis HOM05D006106 ORTHO05D007662 5.7e-60 236.9 331 75.8
PSO339G0809 Papaver somniferum HOM05D006106 ORTHO05D007662 7.4e-60 236.5 345 69.9
Gorai.009G383700 Gossypium raimondii HOM05D006106 ORTHO05D007662 4.8e-59 233.8 349 72.5
Ciclev10004305m.g Citrus clementina HOM05D006106 ORTHO05D007662 6.3e-59 233.4 331 77.0
Gorai.009G450600 Gossypium raimondii HOM05D006106 ORTHO05D007662 8.2e-59 233.0 349 71.6
SGA_v2.0_scaffold105G30404 Striga asiatica HOM05D001739 ORTHO05D006605 8.2e-59 233.0 333 64.9
CSS0045921 Camellia sinensis var. sinensis HOM05D006106 ORTHO05D007662 1.1e-58 232.6 332 75.3
Hund24702 Selenicereus undatus HOM05D006106 ORTHO05D007662 1.1e-58 232.6 334 73.4
CSS0036472 Camellia sinensis var. sinensis HOM05D006106 ORTHO05D007662 1.4e-58 232.3 332 75.3
PSO384G4415 Papaver somniferum HOM05D006106 ORTHO05D007662 1.4e-58 232.3 338 75.1
AUR62024458 Chenopodium quinoa HOM05D006106 ORTHO05D007662 1.8e-58 231.9 348 67.8
TAR623G1683 Trochodendron aralioides HOM05D006106 ORTHO05D007662 4.1e-58 230.7 352 72.7
Gohir.D05G383800 Gossypium hirsutum HOM05D006106 ORTHO05D007662 5.3e-58 230.3 349 71.1
AUR62026047 Chenopodium quinoa HOM05D006106 ORTHO05D007662 9.1e-58 229.6 348 68.4
Migut.J01752 Erythranthe guttata HOM05D006106 ORTHO05D007662 9.1e-58 229.6 347 72.6
Lsat_1_v5_gn_9_30580 Lactuca sativa HOM05D006106 ORTHO05D007662 9.1e-58 229.6 322 76.4
Prupe.7G058400 Prunus persica HOM05D006106 ORTHO05D007662 9.1e-58 229.6 326 75.8
Atru.chr1.1113 Acer truncatum HOM05D006106 ORTHO05D007662 1.5e-57 228.8 355 71.0
EL10Ac3g07098 Beta vulgaris HOM05D006106 ORTHO05D007662 2.0e-57 228.4 323 74.9
Duzib128G0400 Durio zibethinus HOM05D006106 ORTHO05D007662 7.7e-57 226.5 318 76.7
Ah.04g151600 Amaranthus hybridus HOM05D006106 ORTHO05D007662 1.3e-56 225.7 316 75.6
CDE08G0810 Ceratophyllum demersum HOM05D006106 ORTHO05D007662 1.3e-56 225.7 322 74.2
CAN.G676.31 Capsicum annuum HOM05D006106 ORTHO05D007662 1.7e-56 225.3 324 74.7
Zm00001eb325040 Zea mays HOM05D006106 ORTHO05D007662 1.7e-56 225.3 326 76.7
MD12G1080100 Malus domestica HOM05D006106 ORTHO05D007662 2.2e-56 224.9 326 75.5
QL07p000909 Quercus lobata HOM05D006106 ORTHO05D007662 2.2e-56 224.9 329 76.0
Haze_19847 Corylus avellana HOM05D006106 ORTHO05D007662 6.5e-56 223.4 369 69.1
Lj1g0017753 Lotus japonicus HOM05D006106 ORTHO05D007662 8.5e-56 223.0 317 77.3
MELO3C009803.2 Cucumis melo HOM05D006106 ORTHO05D007662 1.1e-55 222.6 330 74.2
Cfa016809 Carpinus fangiana HOM05D001739 ORTHO05D006605 1.4e-55 222.2 369 69.1
Lju124C42G9 Lonicera japonica HOM05D006106 ORTHO05D007662 1.4e-55 222.2 149 63.1
DCAR_009064 Daucus carota HOM05D006106 ORTHO05D007662 2.5e-55 221.5 348 71.6
Dinv12500 Davidia involucrata HOM05D006106 ORTHO05D007662 4.2e-55 220.7 158 63.3
HanXRQChr10g0296661 Helianthus annuus HOM05D006106 ORTHO05D007662 4.2e-55 220.7 323 76.5
Actinidia39218 Actinidia chinensis HOM05D006106 ORTHO05D007662 5.5e-55 220.3 158 63.3
Medtr7g091410 Medicago truncatula HOM05D006106 ORTHO05D007662 5.5e-55 220.3 331 75.2
Oeu008911.1 Olea europaea HOM05D006106 ORTHO05D007662 5.5e-55 220.3 161 62.1
Potri.006G049900 Populus trichocarpa HOM05D006106 ORTHO05D007662 7.2e-55 219.9 330 74.2
Aqoxy1G00233 Aquilegia oxysepala HOM05D006106 ORTHO05D007662 9.4e-55 219.5 369 66.7
Gohir.D05G352101 Gossypium hirsutum HOM05D006106 ORTHO05D007662 1.6e-54 218.8 176 57.4
Hma1.2p1_1041F.1_g251050 Hydrangea macrophylla HOM05D006106 ORTHO05D007662 1.6e-54 218.8 161 60.9
Manes.08G051400 Manihot esculenta HOM05D006106 ORTHO05D007662 2.1e-54 218.4 332 73.8
Nitab4.5_0000586g0120 Nicotiana tabacum HOM05D006106 ORTHO05D007662 2.1e-54 218.4 333 72.7
ClCG10G015760 Citrullus lanatus HOM05D006106 ORTHO05D007662 2.7e-54 218.0 329 73.9
Hma1.2p1_1041F.1_g251060 Hydrangea macrophylla HOM05D006106 ORTHO05D007662 2.7e-54 218.0 149 63.8
AT2G41720 Arabidopsis thaliana HOM05D006106 ORTHO05D007662 3.6e-54 217.6 175 59.4
Ca_15068_v3 Cicer arietinum L. HOM05D006106 ORTHO05D007662 3.6e-54 217.6 353 68.3
AL4G40030 Arabidopsis lyrata HOM05D006106 ORTHO05D007662 4.7e-54 217.2 175 58.9
FAN05G2558 Fragaria x ananassa HOM05D006106 ORTHO05D007662 4.7e-54 217.2 324 75.0
Glyma.03G136200 Glycine max HOM05D006106 ORTHO05D007662 4.7e-54 217.2 338 74.0
Sabra06G0034800 Salix brachista HOM05D006106 ORTHO05D007662 4.7e-54 217.2 330 73.6
TPR.G3692 Trifolium pratense HOM05D006106 ORTHO05D007662 6.1e-54 216.9 331 75.2
Cc06_g17630 Coffea canephora HOM05D006106 ORTHO05D007662 8.0e-54 216.5 158 62.7
CsaV3_3G040680 Cucumis sativus L. HOM05D006106 ORTHO05D007662 1.8e-53 215.3 329 73.9
Gohir.A04G032500 Gossypium hirsutum HOM05D006106 ORTHO05D007662 1.8e-53 215.3 176 55.7
FvH4_6g24060 Fragaria vesca HOM05D006106 ORTHO05D007662 3.0e-53 214.5 324 74.4
Sed0021985 Sechium edule HOM05D006106 ORTHO05D007662 3.0e-53 214.5 329 73.3
Phvul.001G131500 Phaseolus vulgaris HOM05D006106 ORTHO05D007662 3.9e-53 214.2 347 71.2
Thhalv10016262m.g Eutrema salsugineum HOM05D006106 ORTHO05D007662 5.2e-53 213.8 174 59.8
CARHR136820 Cardamine hirsuta HOM05D006106 ORTHO05D007662 8.8e-53 213.0 175 59.4
Rhsim03G0026900 Rhododendron simsii HOM05D006106 ORTHO05D007662 2.6e-52 211.5 176 56.8
Sp4g23970 Schrenkiella parvula HOM05D006106 ORTHO05D007662 3.3e-52 211.1 165 60.6
Aa31LG1G23740 Aethionema arabicum HOM05D006106 ORTHO05D007662 7.4e-52 209.9 176 58.0
Psat3g074120 Pisum sativum HOM05D006106 ORTHO05D007662 1.7e-51 208.8 338 72.5
ATR0188G017 Amborella trichopoda HOM05D006106 ORTHO05D007662 4.8e-51 207.2 202 51.5
RcHm_v2.0_Chr3g0482651 Rosa chinensis HOM05D006106 ORTHO05D007662 4.8e-51 207.2 158 60.8
PGR004G1513 Punica granatum HOM05D006106 ORTHO05D007662 6.3e-51 206.8 164 59.1
arahy.Tifrunner.gnm1.ann1.4I0CBR Arachis hypogaea HOM05D006106 ORTHO05D007662 1.4e-50 205.7 171 56.1
arahy.Tifrunner.gnm1.ann1.HSF0DX Arachis hypogaea HOM05D006106 ORTHO05D007662 1.8e-50 205.3 169 56.8
Lalb_Chr01g0017341 Lupinus albus HOM05D006106 ORTHO05D007662 5.3e-50 203.8 182 55.5
vmacro07842 Vaccinium macrocarpon HOM05D006106 ORTHO05D007662 5.3e-50 203.8 142 62.7
VMungo1383G2820 Vigna mungo HOM05D006106 ORTHO05D007662 2.9e-48 198.0 158 58.9
A05p02440 Brassica napus HOM05D006106 ORTHO05D007662 3.8e-48 197.6 176 55.1
BraA05t19238Z Brassica rapa HOM05D006106 ORTHO05D007662 3.8e-48 197.6 176 55.1
C04p02890 Brassica napus HOM05D006106 ORTHO05D007662 2.5e-47 194.9 178 53.9
BolC4t21929H Brassica oleracea HOM05D006106 ORTHO05D007662 2.5e-47 194.9 178 53.9
Eucgr.A02342 Eucalyptus grandis HOM05D006106 ORTHO05D007662 2.1e-46 191.8 291 78.4
Glyma.19G138101 Glycine max HOM05D006106 ORTHO05D007662 3.6e-46 191.0 160 58.8
Nitab4.5_0009615g0030 Nicotiana tabacum HOM05D006106 ORTHO05D007662 6.1e-46 190.3 332 69.6
Cpa.g.sc224.2 Carica papaya HOM05D006106 ORTHO05D007662 8.0e-46 189.9 351 68.9
QL07p000892 Quercus lobata HOM05D006106 ORTHO05D007662 1.8e-45 188.7 149 59.7
ECA247G0166 Erigeron canadensis HOM05D001739 ORTHO05D006605 6.8e-45 186.8 294 75.9
COL.COLO4_28304 Corchorus olitorius HOM05D006106 ORTHO05D007662 1.6e-41 175.6 160 51.9
Pp3c2_1940 Physcomitrium patens HOM05D006106 ORTHO05D007662 2.1e-38 165.2 135 57.0
AagrBONN_evm.TU.Sc2ySwM_344.4225 Anthoceros agrestis HOM05D006106 ORTHO05D007662 1.7e-35 155.6 128 56.2
Carub.0004s2400 Capsella rubella HOM05D006106 ORTHO05D007662 6.3e-35 153.7 94 70.2
MBI17_g23175_MAGBIO Magnolia biondii HOM05D006106 ORTHO05D007662 1.1e-34 152.9 543 34.3
Peaxi162Scf00130g00324 Petunia axillaris HOM05D006106 ORTHO05D007662 5.4e-34 150.6 325 67.7
Mapoly0043s0117 Marchantia polymorpha HOM05D006106 ORTHO05D007662 9.1e-34 149.8 130 53.8
Gorai.003G091300 Gossypium raimondii HOM05D006106 ORTHO05D007662 1.6e-25 122.5 239 61.5
Rhsim03G0025700 Rhododendron simsii HOM05D006106 ORTHO05D007662 5.6e-23 114.0 117 47.0
CiPaw.10G033900 Carya illinoinensis HOM05D006106 ORTHO05D007662 8.0e-22 110.2 66 69.7
Actinidia09323 Actinidia chinensis HOM05D001739 ORTHO05D006605 1.4e-21 109.4 113 48.7
unitig_578.g15981 Utricularia gibba HOM05D006106 ORTHO05D007662 1.8e-21 109.0 94 54.3
CBR_g50368 Chara braunii HOM05D006106 ORTHO05D007662 1.2e-20 106.3 101 45.5
Os07g0213300 Oryza sativa ssp. japonica HOM05D006106 ORTHO05D007662 1.5e-20 105.9 220 86.8
TAR623G1698 Trochodendron aralioides HOM05D006106 ORTHO05D007662 4.4e-20 104.4 77 58.4
Rhsim03G0026800 Rhododendron simsii HOM05D006106 ORTHO05D007662 5.8e-20 104.0 107 47.7
Thecc.05G152200 Theobroma cacao HOM05D006106 ORTHO05D007662 4.9e-19 100.9 220 85.5
BcaNung06815 Brassica carinata HOM05D006106 ORTHO05D007662 8.3e-19 100.1 66 66.7
CDE08G0364 Ceratophyllum demersum HOM05D006106 ORTHO05D007662 1.4e-18 99.4 77 58.4
Nitab4.5_0009615g0040 Nicotiana tabacum HOM05D006106 ORTHO05D007662 2.0e-17 95.5 77 51.9
FAN14G5662 Fragaria x ananassa HOM05D006106 ORTHO05D007662 3.5e-17 94.7 81 54.3
Rhsim03G0026000 Rhododendron simsii HOM05D001739 ORTHO05D007662 3.5e-17 94.7 104 47.1
Solyc04g015950.3 Solanum lycopersicum HOM05D006106 ORTHO05D007662 2.3e-16 92.0 81 46.9
Ca_08448_v3 Cicer arietinum L. HOM05D006106 ORTHO05D007662 6.6e-16 90.5 77 48.1
Rhsim03G0025500 Rhododendron simsii HOM05D006106 ORTHO05D007662 1.5e-15 89.4 88 48.9
Gohir.D05G352075 Gossypium hirsutum HOM05D006106 ORTHO05D007662 1.9e-15 89.0 77 49.4
Gohir.D05G383766 Gossypium hirsutum HOM05D006106 ORTHO05D007662 1.9e-15 89.0 77 49.4
THA.LOC104804858 Tarenaya hassleriana HOM05D006106 ORTHO05D007662 7.3e-15 87.0 221 83.7
CiPaw.10G034000 Carya illinoinensis HOM05D006106 ORTHO05D007662 9.5e-15 86.7 81 43.2
BcaNung06942 Brassica carinata HOM05D006106 ORTHO05D007662 5.2e-13 80.9 100 45.0
Gohir.D03G068901 Gossypium hirsutum HOM05D006106 ORTHO05D007662 1.4e-10 72.8 48 64.6
Nn2g14806 Nelumbo nucifera HOM05D002479 ORTHO05D002675 2.8e-06 58.5 76 35.5
SEGI_09862 Sequoiadendron giganteum HOM05D006106 ORTHO05D007662 2.8e-06 58.5 41 53.7


User provided reference genes

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