Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_010987 Vanilla planifolia HOM05D000066 ORTHO05D432701 1.8e-56 222.2 105 100.0
HPP92_010986 Vanilla planifolia HOM05D000066 ORTHO05D001011 9.8e-18 93.6 117 45.3
CDE05G2329 Ceratophyllum demersum HOM05D000066 ORTHO05D001011 2.0e-10 69.3 87 39.1
DCAR_030304 Daucus carota HOM05D000066 ORTHO05D001011 4.4e-10 68.2 113 37.2
FAN07G1451 Fragaria x ananassa HOM05D000066 ORTHO05D001011 5.7e-10 67.8 123 35.8
Ah.04g159990 Amaranthus hybridus HOM05D000066 ORTHO05D001011 9.8e-10 67.0 101 39.6
MSTRG.13643 Avicennia marina HOM05D000066 ORTHO05D001011 2.2e-09 65.9 118 34.7
DCAR_002665 Daucus carota HOM05D000066 ORTHO05D001011 2.8e-09 65.5 107 39.3
FvH4_4g33070 Fragaria vesca HOM05D000066 ORTHO05D001011 6.3e-09 64.3 123 35.0
FAN12G3372 Fragaria x ananassa HOM05D000066 ORTHO05D001011 6.3e-09 64.3 123 35.0
FAN17G1519 Fragaria x ananassa HOM05D000066 ORTHO05D001011 6.3e-09 64.3 123 35.0
FAN22G1741 Fragaria x ananassa HOM05D000066 ORTHO05D001011 6.3e-09 64.3 123 35.0
Lj3C860G16 Lonicera japonica HOM05D000066 ORTHO05D001011 6.3e-09 64.3 101 38.6
Lj6A732T70 Lonicera japonica HOM05D000066 ORTHO05D001011 6.3e-09 64.3 109 37.6
HPP92_016715 Vanilla planifolia HOM05D000066 ORTHO05D001011 6.3e-09 64.3 109 34.9
CAN.G282.105 Capsicum annuum HOM05D000066 ORTHO05D001011 8.3e-09 63.9 125 32.0
ClCG07G006800 Citrullus lanatus HOM05D000066 ORTHO05D001011 8.3e-09 63.9 108 37.0
MBI19_g25214_MAGBIO Magnolia biondii HOM05D000066 ORTHO05D001011 8.3e-09 63.9 119 35.3
MBI19_g27891_MAGBIO Magnolia biondii HOM05D000066 ORTHO05D001011 8.3e-09 63.9 119 35.3
RcHm_v2.0_Chr4g0442121 Rosa chinensis HOM05D000066 ORTHO05D001011 8.3e-09 63.9 123 34.1
Eucgr.G02075 Eucalyptus grandis HOM05D000066 ORTHO05D001011 1.4e-08 63.2 108 37.0
Lalb_Chr12g0209361 Lupinus albus HOM05D000066 ORTHO05D001011 1.4e-08 63.2 109 35.8
Actinidia12432 Actinidia chinensis HOM05D000066 ORTHO05D001011 1.8e-08 62.8 108 37.0
THA.LOC104823577 Tarenaya hassleriana HOM05D000066 ORTHO05D001011 1.8e-08 62.8 114 36.0
Cfa015063 Carpinus fangiana HOM05D000066 ORTHO05D001011 2.4e-08 62.4 114 34.2
CiPaw.06G059300 Carya illinoinensis HOM05D000066 ORTHO05D001011 2.4e-08 62.4 108 36.1
Dinv14373 Davidia involucrata HOM05D000066 ORTHO05D001011 2.4e-08 62.4 108 37.0
Eucgr.B02660 Eucalyptus grandis HOM05D000066 ORTHO05D001011 2.4e-08 62.4 130 33.1
Rhsim09G0086400 Rhododendron simsii HOM05D000066 ORTHO05D001011 2.4e-08 62.4 106 38.7
SGA_v2.0_scaffold3G01745 Striga asiatica HOM05D000066 ORTHO05D001011 2.4e-08 62.4 118 34.7
THA.LOC104805096 Tarenaya hassleriana HOM05D000066 ORTHO05D001011 2.4e-08 62.4 108 37.0
ClCG01G006760 Citrullus lanatus HOM05D000066 ORTHO05D001011 3.1e-08 62.0 104 36.5
Prupe.1G337000 Prunus persica HOM05D000066 ORTHO05D001011 3.1e-08 62.0 106 37.7
MSTRG.2111 Avicennia marina HOM05D000066 ORTHO05D001011 4.1e-08 61.6 108 36.1
Cc11_g05890 Coffea canephora HOM05D000066 ORTHO05D001011 4.1e-08 61.6 123 33.3
MELO3C005245.2 Cucumis melo HOM05D000066 ORTHO05D001011 4.1e-08 61.6 108 36.1
CsaV3_5G027790 Cucumis sativus L. HOM05D000066 ORTHO05D001011 4.1e-08 61.6 108 36.1
HanXRQChr16g0527351 Helianthus annuus HOM05D000066 ORTHO05D001011 4.1e-08 61.6 106 37.7
Hma1.2p1_0037F.1_g023790 Hydrangea macrophylla HOM05D000066 ORTHO05D001011 4.1e-08 61.6 108 37.0
Lsat_1_v5_gn_4_22721 Lactuca sativa HOM05D000066 ORTHO05D001011 4.1e-08 61.6 108 37.0
Actinidia20111 Actinidia chinensis HOM05D000066 ORTHO05D001011 5.4e-08 61.2 108 36.1
arahy.Tifrunner.gnm1.ann1.D3GWAL Arachis hypogaea HOM05D000066 ORTHO05D001011 5.4e-08 61.2 100 36.0
MELO3C018292.2 Cucumis melo HOM05D000066 ORTHO05D001011 5.4e-08 61.2 108 36.1
CsaV3_5G015380 Cucumis sativus L. HOM05D000066 ORTHO05D001011 5.4e-08 61.2 108 36.1
Dinv05684 Davidia involucrata HOM05D000066 ORTHO05D001011 5.4e-08 61.2 108 36.1
ECA234G1752 Erigeron canadensis HOM05D000066 ORTHO05D001011 5.4e-08 61.2 108 37.0
Os03g0239000 Oryza sativa ssp. japonica HOM05D000066 ORTHO05D001011 5.4e-08 61.2 108 35.2
Sed0011859 Sechium edule HOM05D000066 ORTHO05D001011 5.4e-08 61.2 108 35.2
Sed0017411 Sechium edule HOM05D000066 ORTHO05D001011 5.4e-08 61.2 108 35.2
CANSAT78G0060 Cannabis sativa HOM05D000066 ORTHO05D001011 7.0e-08 60.8 108 36.1
DCAR_026819 Daucus carota HOM05D000066 ORTHO05D001011 7.0e-08 60.8 111 36.0
Potri.010G102300 Populus trichocarpa HOM05D000066 ORTHO05D001011 7.0e-08 60.8 106 35.8
Aa31LG2G8060 Aethionema arabicum HOM05D000066 ORTHO05D001011 9.2e-08 60.5 108 36.1
AL5G10960 Arabidopsis lyrata HOM05D000066 ORTHO05D001011 9.2e-08 60.5 107 37.4
CSS0034481 Camellia sinensis var. sinensis HOM05D000066 ORTHO05D001011 9.2e-08 60.5 108 36.1
Carub.0005s0081 Capsella rubella HOM05D000066 ORTHO05D001011 9.2e-08 60.5 107 37.4
CARHR144410 Cardamine hirsuta HOM05D000066 ORTHO05D001011 9.2e-08 60.5 107 37.4
Cc00_g17060 Coffea canephora HOM05D000066 ORTHO05D001011 9.2e-08 60.5 123 33.3
Gohir.A03G112700 Gossypium hirsutum HOM05D000066 ORTHO05D001011 9.2e-08 60.5 108 36.1
Gohir.D02G137101 Gossypium hirsutum HOM05D000066 ORTHO05D001011 9.2e-08 60.5 108 36.1
Gorai.005G153200 Gossypium raimondii HOM05D000066 ORTHO05D001011 9.2e-08 60.5 108 36.1
Manes.15G137800 Manihot esculenta HOM05D000066 ORTHO05D001011 9.2e-08 60.5 113 34.5
Sabra08G0105300 Salix brachista HOM05D000066 ORTHO05D001011 9.2e-08 60.5 108 35.2
Sc10g0004910 Simmondsia chinensis HOM05D000066 ORTHO05D001011 9.2e-08 60.5 117 35.0
TAR371G0947 Trochodendron aralioides HOM05D000066 ORTHO05D001011 9.2e-08 60.5 106 36.8
TAR371G1120 Trochodendron aralioides HOM05D000066 ORTHO05D001011 9.2e-08 60.5 106 36.8
TAR622G1144 Trochodendron aralioides HOM05D000066 ORTHO05D001011 9.2e-08 60.5 108 36.1
Ah.06g190480 Amaranthus hybridus HOM05D000066 ORTHO05D001011 1.2e-07 60.1 109 35.8
COL.COLO4_27592 Corchorus olitorius HOM05D000066 ORTHO05D001011 1.2e-07 60.1 108 36.1
Duzib248G0056 Durio zibethinus HOM05D000066 ORTHO05D001011 1.2e-07 60.1 108 35.2
Glyma.05G138700 Glycine max HOM05D000066 ORTHO05D001011 1.2e-07 60.1 113 33.6
Lj2g0014431 Lotus japonicus HOM05D000066 ORTHO05D001011 1.2e-07 60.1 108 35.2
Lj4g0023590 Lotus japonicus HOM05D000066 ORTHO05D001011 1.2e-07 60.1 108 34.3
SalBow2G0861 Salvia bowleyana HOM05D000066 ORTHO05D001011 1.2e-07 60.1 108 36.1
TWI74G0442 Tripterygium wilfordii HOM05D000066 ORTHO05D001011 1.2e-07 60.1 108 35.2
GSVIVG01011603001 Vitis vinifera HOM05D000066 ORTHO05D001011 1.2e-07 60.1 108 36.1
BraA06t27273Z Brassica rapa HOM05D000066 ORTHO05D001011 1.6e-07 59.7 116 34.5
Duzib268G1396 Durio zibethinus HOM05D000066 ORTHO05D001011 1.6e-07 59.7 108 35.2
Thhalv10008160m.g Eutrema salsugineum HOM05D000066 ORTHO05D001011 1.6e-07 59.7 108 36.1
TAR629G1997 Trochodendron aralioides HOM05D000066 ORTHO05D001011 1.6e-07 59.7 113 34.5
HPP92_020901 Vanilla planifolia HOM05D000066 ORTHO05D001011 1.6e-07 59.7 123 30.1
VMungo0251G0746 Vigna mungo HOM05D000066 ORTHO05D001011 1.6e-07 59.7 133 31.6
arahy.Tifrunner.gnm1.ann1.MAC6YY Arachis hypogaea HOM05D000066 ORTHO05D001011 2.0e-07 59.3 108 34.3
arahy.Tifrunner.gnm1.ann1.VWTL5B Arachis hypogaea HOM05D000066 ORTHO05D001011 2.0e-07 59.3 108 34.3
BraA09t41552Z Brassica rapa HOM05D000066 ORTHO05D001011 2.0e-07 59.3 108 36.1
Carub.0001s1450 Capsella rubella HOM05D000066 ORTHO05D001011 2.0e-07 59.3 108 36.1
Cpa.g.sc2.137 Carica papaya HOM05D000066 ORTHO05D001011 2.0e-07 59.3 107 33.6
Glyma.08G093900 Glycine max HOM05D000066 ORTHO05D001011 2.0e-07 59.3 108 34.3
Manes.17G087100 Manihot esculenta HOM05D000066 ORTHO05D001011 2.0e-07 59.3 113 33.6
Solyc01g005120.3 Solanum lycopersicum HOM05D000066 ORTHO05D001011 2.0e-07 59.3 108 34.3
Sopen01g001140 Solanum pennellii HOM05D000066 ORTHO05D001011 2.0e-07 59.3 108 34.3
PGSC0003DMG400022791 Solanum tuberosum HOM05D000066 ORTHO05D001011 2.0e-07 59.3 108 34.3
THA.LOC104824120 Tarenaya hassleriana HOM05D000066 ORTHO05D001011 2.0e-07 59.3 106 36.8
unitig_62.g23749 Utricularia gibba HOM05D000066 ORTHO05D001011 2.0e-07 59.3 105 38.1
arahy.Tifrunner.gnm1.ann1.K91ZD2 Arachis hypogaea HOM05D000066 ORTHO05D001011 2.7e-07 58.9 106 34.0
BcaC06g31270 Brassica carinata HOM05D000066 ORTHO05D001011 2.7e-07 58.9 116 36.2
BcaC06g34104 Brassica carinata HOM05D000066 ORTHO05D001011 2.7e-07 58.9 116 36.2
A06p43980 Brassica napus HOM05D000066 ORTHO05D001011 2.7e-07 58.9 116 36.2
MD13G1016500 Malus domestica HOM05D000066 ORTHO05D001011 2.7e-07 58.9 106 35.8
Potri.008G138400 Populus trichocarpa HOM05D000066 ORTHO05D001011 2.7e-07 58.9 108 35.2
Sabra10G0075100 Salix brachista HOM05D000066 ORTHO05D001011 2.7e-07 58.9 108 34.3
AT1G14720 Arabidopsis thaliana HOM05D000066 ORTHO05D001011 3.5e-07 58.5 108 35.2
BcaC07g41545 Brassica carinata HOM05D000066 ORTHO05D001011 3.5e-07 58.5 108 35.2
A09p61850 Brassica napus HOM05D000066 ORTHO05D001011 3.5e-07 58.5 108 35.2
C08p45490 Brassica napus HOM05D000066 ORTHO05D001011 3.5e-07 58.5 108 35.2
BolC8t52101H Brassica oleracea HOM05D000066 ORTHO05D001011 3.5e-07 58.5 108 35.2
MELO3C003441.2 Cucumis melo HOM05D000066 ORTHO05D001011 3.5e-07 58.5 119 31.9
Nitab4.5_0009123g0010 Nicotiana tabacum HOM05D000066 ORTHO05D001011 3.5e-07 58.5 106 34.9
Hund07020 Selenicereus undatus HOM05D000066 ORTHO05D001011 3.5e-07 58.5 117 33.3
Glyma.07G174800 Glycine max HOM05D000066 ORTHO05D001011 4.5e-07 58.2 108 33.3
Gohir.A13G029900 Gossypium hirsutum HOM05D000066 ORTHO05D001011 4.5e-07 58.2 106 35.8
Gohir.D13G028000 Gossypium hirsutum HOM05D000066 ORTHO05D001011 4.5e-07 58.2 106 35.8
Gorai.013G032000 Gossypium raimondii HOM05D000066 ORTHO05D001011 4.5e-07 58.2 106 35.8
Lalb_Chr07g0187821 Lupinus albus HOM05D000066 ORTHO05D001011 4.5e-07 58.2 108 34.3
Oeu044075.1 Olea europaea HOM05D000066 ORTHO05D001011 4.5e-07 58.2 108 35.2
Phvul.002G182000 Phaseolus vulgaris HOM05D000066 ORTHO05D001011 4.5e-07 58.2 108 34.3
Phvul.003G014400 Phaseolus vulgaris HOM05D000066 ORTHO05D001011 4.5e-07 58.2 106 34.0
Sp1g13160 Schrenkiella parvula HOM05D000066 ORTHO05D001011 4.5e-07 58.2 106 36.8
Thecc.02G305100 Theobroma cacao HOM05D000066 ORTHO05D001011 4.5e-07 58.2 108 35.2
VMungo1215G0234 Vigna mungo HOM05D000066 ORTHO05D001011 4.5e-07 58.2 108 33.3
Aqoxy3G02166 Aquilegia oxysepala HOM05D000066 ORTHO05D001011 5.9e-07 57.8 107 36.4
BcaB07g30369 Brassica carinata HOM05D000066 ORTHO05D001011 5.9e-07 57.8 116 35.3
HanXRQChr17g0566121 Helianthus annuus HOM05D000066 ORTHO05D001011 5.9e-07 57.8 106 35.8
MD16G1014000 Malus domestica HOM05D000066 ORTHO05D001011 5.9e-07 57.8 106 35.8
PSO729G0269 Papaver somniferum HOM05D000066 ORTHO05D001011 5.9e-07 57.8 122 31.1
Sp2g13270 Schrenkiella parvula HOM05D000066 ORTHO05D001011 5.9e-07 57.8 116 35.3
Atru.chr11.747 Acer truncatum HOM05D000066 ORTHO05D001011 7.7e-07 57.4 113 33.6
ATR0598G292 Amborella trichopoda HOM05D000066 ORTHO05D001011 7.7e-07 57.4 108 35.2
AL1G26730 Arabidopsis lyrata HOM05D000066 ORTHO05D001011 7.7e-07 57.4 108 35.2
A02p32410 Brassica napus HOM05D000066 ORTHO05D001011 7.7e-07 57.4 116 35.3
C07p32650 Brassica napus HOM05D000066 ORTHO05D001011 7.7e-07 57.4 116 35.3
BolC7t43786H Brassica oleracea HOM05D000066 ORTHO05D001011 7.7e-07 57.4 116 35.3
BraA02t08259Z Brassica rapa HOM05D000066 ORTHO05D001011 7.7e-07 57.4 116 35.3
ClCG09G011620 Citrullus lanatus HOM05D000066 ORTHO05D001011 7.7e-07 57.4 119 31.1
Glyma.20G012300 Glycine max HOM05D000066 ORTHO05D001011 7.7e-07 57.4 108 33.3
Nitab4.5_0000521g0100 Nicotiana tabacum HOM05D000066 ORTHO05D001011 7.7e-07 57.4 108 33.3
QL03p038881 Quercus lobata HOM05D000066 ORTHO05D001011 7.7e-07 57.4 108 33.3
TPR.G5056 Trifolium pratense HOM05D000066 ORTHO05D001011 7.7e-07 57.4 108 33.3
unitig_22.g5609 Utricularia gibba HOM05D000066 ORTHO05D001011 7.7e-07 57.4 106 36.8
CARHR015250 Cardamine hirsuta HOM05D000066 ORTHO05D001011 1.0e-06 57.0 108 35.2
Haze_10828 Corylus avellana HOM05D000066 ORTHO05D001011 1.0e-06 57.0 130 30.0
CsaV3_3G048830 Cucumis sativus L. HOM05D000066 ORTHO05D001011 1.0e-06 57.0 119 31.1
Thhalv10004560m.g Eutrema salsugineum HOM05D000066 ORTHO05D001011 1.0e-06 57.0 105 35.2
HanXRQChr12g0380681 Helianthus annuus HOM05D000066 ORTHO05D001011 1.0e-06 57.0 107 34.6
Nn1g01865 Nelumbo nucifera HOM05D000066 ORTHO05D001011 1.0e-06 57.0 108 32.4
PGR102G2996 Punica granatum HOM05D000066 ORTHO05D001011 1.0e-06 57.0 104 35.6
MBI04_g34386_MAGBIO Magnolia biondii HOM05D000066 ORTHO05D001011 1.3e-06 56.6 121 34.7
Manes.15G192300 Manihot esculenta HOM05D000066 ORTHO05D001011 1.3e-06 56.6 108 34.3
Peaxi162Scf00337g00412 Petunia axillaris HOM05D000066 ORTHO05D001011 1.3e-06 56.6 113 33.6
Sopen04g003330 Solanum pennellii HOM05D000066 ORTHO05D001011 1.3e-06 56.6 109 33.0
TAR636G1854 Trochodendron aralioides HOM05D000066 ORTHO05D001011 1.3e-06 56.6 108 35.2
Zm00001eb399120 Zea mays HOM05D000066 ORTHO05D001011 1.3e-06 56.6 106 34.9
AT2G01850 Arabidopsis thaliana HOM05D000066 ORTHO05D001011 1.7e-06 56.2 105 36.2
Medtr1g033420 Medicago truncatula HOM05D000066 ORTHO05D001011 1.7e-06 56.2 108 33.3
PSO210G3327 Papaver somniferum HOM05D000066 ORTHO05D001011 1.7e-06 56.2 129 32.6
PSO724G1168 Papaver somniferum HOM05D000066 ORTHO05D001011 1.7e-06 56.2 108 34.3
Sabra03G0065800 Salix brachista HOM05D000066 ORTHO05D001011 1.7e-06 56.2 109 33.0
Thecc.03G310700 Theobroma cacao HOM05D000066 ORTHO05D001011 1.7e-06 56.2 108 34.3
Ciclev10015872m.g Citrus clementina HOM05D000066 ORTHO05D001011 2.3e-06 55.8 115 33.0
MBI13_g34560_MAGBIO Magnolia biondii HOM05D000066 ORTHO05D001011 2.3e-06 55.8 88 39.8
PSO210G2900 Papaver somniferum HOM05D000066 ORTHO05D001011 2.3e-06 55.8 129 31.8
PSO210G7798 Papaver somniferum HOM05D000066 ORTHO05D001011 2.3e-06 55.8 111 34.2
Sed0004911 Sechium edule HOM05D000066 ORTHO05D001011 2.3e-06 55.8 106 34.0
Nitab4.5_0000926g0150 Nicotiana tabacum HOM05D000066 ORTHO05D001011 2.9e-06 55.5 125 31.2
Solyc04g008210.2 Solanum lycopersicum HOM05D000066 ORTHO05D001011 2.9e-06 55.5 109 33.0
Rhsim07G0132500 Rhododendron simsii HOM05D000066 ORTHO05D001011 3.8e-06 55.1 108 32.4
PGSC0003DMG400029503 Solanum tuberosum HOM05D000066 ORTHO05D001011 3.8e-06 55.1 109 33.0
C02p49990 Brassica napus HOM05D000066 ORTHO05D001011 5.0e-06 54.7 116 34.5
BolC2t11078H Brassica oleracea HOM05D000066 ORTHO05D001011 5.0e-06 54.7 116 34.5
CDE02G3966 Ceratophyllum demersum HOM05D000066 ORTHO05D001011 5.0e-06 54.7 119 33.6
Sed0015752 Sechium edule HOM05D000066 ORTHO05D001011 5.0e-06 54.7 108 32.4
CANSAT21G1865 Cannabis sativa HOM05D000066 ORTHO05D001011 6.6e-06 54.3 108 30.6
Ciclev10001649m.g Citrus clementina HOM05D000066 ORTHO05D001011 6.6e-06 54.3 109 35.8
MBI04_g43808_MAGBIO Magnolia biondii HOM05D000066 ORTHO05D001011 6.6e-06 54.3 130 30.0
Os09g0395600 Oryza sativa ssp. japonica HOM05D000066 ORTHO05D001011 6.6e-06 54.3 118 30.5
Potri.001G136100 Populus trichocarpa HOM05D000066 ORTHO05D001011 6.6e-06 54.3 108 32.4
SHI04276 Sapria himalayana HOM05D000066 ORTHO05D001011 6.6e-06 54.3 108 33.3
CDE07G2004 Ceratophyllum demersum HOM05D000066 ORTHO05D001011 8.6e-06 53.9 108 29.6
Dinv43984 Davidia involucrata HOM05D000066 ORTHO05D001011 8.6e-06 53.9 108 34.3


User provided reference genes

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