Gene: AT1G14720

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G14720
  • Transcript Identifier AT1G14720.1
  • Gene Type Coding gene
  • Location Chr1 : 5066806-5068466 : negative

Gene Family Information

  • ID HOM05D000066
  • #Genes/#Species 3967/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G14720.1
  • symbol XTH28
  • Alias ATXTH28,EXGT-A2,ENDOXYLOGLUCAN TRANSFERASE A2,XTR2,xyloglucan endotransglycosylase related 2
  • uniprot Q38909

Descriptions

  • Description xyloglucan endotransglucosylase/hydrolase 28
  • Computational description xyloglucan endotransglucosylase/hydrolase 28 (XTH28); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: fruit development, stamen filament development; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: endoxyloglucan transferase A3 (TAIR:AT2G01850.1); Has 2041 Blast hits to 2031 proteins in 289 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 395; Plants - 1341; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0006073
IEA
GOA Databasecellular glucan metabolic process
GO:0006073
IEA
InterProcellular glucan metabolic process
GO:0042546
IEA
Gene Ontologycell wall biogenesis
GO:0042546
IEA
InterProcell wall biogenesis
GO:0010411
IEA
Gene Ontologyxyloglucan metabolic process
GO:0010411
IEA
InterProxyloglucan metabolic process
GO:0008152
IEA
GOA Databasemetabolic process
GO:0071555
IEA
GOA Databasecell wall organization
GO:0080086
IMP
Gene Ontologystamen filament development1
GO:0010154
IMP
Gene Ontologyfruit development1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004553
IEA
Gene Ontologyhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016762
ISS
IEA
Gene Ontologyxyloglucan:xyloglucosyl transferase activity2
GO:0016762
IEA
InterProxyloglucan:xyloglucosyl transferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048046
IEA
GOA Databaseapoplast
GO:0048046
IEA
InterProapoplast
GO:0005618
IEA
GOA Databasecell wall
GO:0005618
IEA
InterProcell wall
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016455 Xyloglucan endotransglucosylase/hydrolase
IPR010713 Xyloglucan endo-transglycosylase, C-terminal
IPR000757 Glycoside hydrolase family 16
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
IPR044791 Beta-glucanase/XTH
Mapman id Description
50.2.4 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase