Gene: Sopen04g003330

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g003330
  • Transcript Identifier Sopen04g003330.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 2008004-2010491 : positive

Gene Family Information

  • ID HOM05D000066
  • #Genes/#Species 3967/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g003330.1

Descriptions

  • Description EXGT-A3 has homology to xyloglucan endotransglucosylases/hydrolases (XTHs). Mutants in this gene show a lesion mimic phenotype associated with leaf maturation and a reduction in the number of tertiary veins. Individual tracheary elements in the mutants are shorter, but phloem transport activity is not severely affected. EXGT-A3 plays a role in xyloglucan degradation in the differentiating tracheary elements of rosette leaves. | endoxyloglucan transferase A3 (EXGT-A3) | FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity | INVOLVED IN: phloem or xylem histogenesis | LOCATED IN: endomembrane system, cell wall, apoplast | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase , Xyloglucan endo-transglycosylase, C-terminal , Concanavalin A-like lectin/glucanase, subgroup , Concanavalin A-like lectin/glucanase , Glycoside hydrolase, family 16 | BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 28
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006073
IEA
InterProcellular glucan metabolic process
GO:0010411
IEA
InterProxyloglucan metabolic process
GO:0042546
IEA
InterProcell wall biogenesis
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0010087
ISO
PLAZA Integrative Orthologyphloem or xylem histogenesis AT2G01850

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016762
IEA
InterProxyloglucan:xyloglucosyl transferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
IEA
InterProcell wall
GO:0048046
IEA
InterProapoplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044791 Beta-glucanase/XTH
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
IPR010713 Xyloglucan endo-transglycosylase, C-terminal
IPR016455 Xyloglucan endotransglucosylase/hydrolase
IPR000757 Glycoside hydrolase family 16
Mapman id Description
50.2.4 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase