Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_010930 Vanilla planifolia HOM05D000361 ORTHO05D030931 1.5e-71 272.7 136 100.0
MBI18_g31678_MAGBIO Magnolia biondii HOM05D000361 ORTHO05D005006 1.1e-42 176.8 108 78.7
TAR636G2453 Trochodendron aralioides HOM05D000361 ORTHO05D005006 3.7e-41 171.8 121 72.7
Dinv33113 Davidia involucrata HOM05D000361 ORTHO05D005006 4.0e-40 168.3 120 70.0
Nn4g25602 Nelumbo nucifera HOM05D000361 ORTHO05D005006 5.3e-40 167.9 106 77.4
Duzib133G0702 Durio zibethinus HOM05D000361 ORTHO05D005006 1.5e-39 166.4 105 79.0
Duzib138G1298 Durio zibethinus HOM05D000361 ORTHO05D005006 1.5e-39 166.4 106 78.3
Gorai.007G123000 Gossypium raimondii HOM05D000361 ORTHO05D005006 1.5e-39 166.4 107 74.8
Gohir.A11G109800 Gossypium hirsutum HOM05D000361 ORTHO05D005006 2.0e-39 166.0 107 74.8
Thecc.01G313100 Theobroma cacao HOM05D000361 ORTHO05D005006 3.4e-39 165.2 106 77.4
Gohir.D11G114800 Gossypium hirsutum HOM05D000361 ORTHO05D005006 4.5e-39 164.9 107 73.8
Manes.05G003100 Manihot esculenta HOM05D000361 ORTHO05D005006 5.8e-39 164.5 106 74.5
Actinidia25846 Actinidia chinensis HOM05D000361 ORTHO05D005006 7.6e-39 164.1 106 72.6
Glyma.03G219200 Glycine max HOM05D000361 ORTHO05D005006 9.9e-39 163.7 107 73.8
Glyma.19G216100 Glycine max HOM05D000361 ORTHO05D005006 9.9e-39 163.7 107 73.8
Hma1.2p1_0486F.1_g163240 Hydrangea macrophylla HOM05D000361 ORTHO05D005006 1.3e-38 163.3 106 72.6
Sabra14G0089600 Salix brachista HOM05D000361 ORTHO05D005006 1.3e-38 163.3 105 75.2
Sed0026353 Sechium edule HOM05D000361 ORTHO05D005006 1.3e-38 163.3 117 69.2
CANSAT25G2674 Cannabis sativa HOM05D000361 ORTHO05D005006 1.7e-38 162.9 106 75.5
QL12p019977 Quercus lobata HOM05D000361 ORTHO05D005006 2.2e-38 162.5 106 73.6
CDE05G0987 Ceratophyllum demersum HOM05D000361 ORTHO05D005006 2.9e-38 162.2 106 71.7
COL.COLO4_23235 Corchorus olitorius HOM05D000361 ORTHO05D005006 2.9e-38 162.2 103 76.7
Haze_05038 Corylus avellana HOM05D000361 ORTHO05D005006 2.9e-38 162.2 106 71.7
Potri.014G121000 Populus trichocarpa HOM05D000361 ORTHO05D005006 2.9e-38 162.2 105 76.2
vmacro15112 Vaccinium macrocarpon HOM05D000361 ORTHO05D005006 2.9e-38 162.2 106 72.6
CiPaw.07G117300 Carya illinoinensis HOM05D000361 ORTHO05D005006 3.8e-38 161.8 106 73.6
MELO3C015926.2 Cucumis melo HOM05D000361 ORTHO05D005006 3.8e-38 161.8 106 72.6
CsaV3_7G029940 Cucumis sativus L. HOM05D000361 ORTHO05D005006 3.8e-38 161.8 106 72.6
Lj1A17T32 Lonicera japonica HOM05D000361 ORTHO05D005006 3.8e-38 161.8 111 71.2
CSS0002573 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D005006 4.9e-38 161.4 120 66.7
Ca_09208_v3 Cicer arietinum L. HOM05D000361 ORTHO05D005006 4.9e-38 161.4 106 73.6
arahy.Tifrunner.gnm1.ann1.1KN0VJ Arachis hypogaea HOM05D000361 ORTHO05D005006 6.4e-38 161.0 106 71.7
arahy.Tifrunner.gnm1.ann1.KD1TI7 Arachis hypogaea HOM05D000361 ORTHO05D005006 6.4e-38 161.0 106 71.7
Solyc01g079500.4 Solanum lycopersicum HOM05D000361 ORTHO05D005006 6.4e-38 161.0 106 70.8
Sopen01g031270 Solanum pennellii HOM05D000361 ORTHO05D005006 6.4e-38 161.0 106 70.8
AUR62011814 Chenopodium quinoa HOM05D000361 ORTHO05D005006 1.1e-37 160.2 107 72.0
TWI36G0681 Tripterygium wilfordii HOM05D000361 ORTHO05D005006 1.1e-37 160.2 106 75.5
GSVIVG01028118001 Vitis vinifera HOM05D000361 ORTHO05D005006 1.4e-37 159.8 107 71.0
Aa31LG5G1690 Aethionema arabicum HOM05D000361 ORTHO05D005006 1.9e-37 159.5 107 72.9
RcHm_v2.0_Chr7g0241501 Rosa chinensis HOM05D000361 ORTHO05D005006 2.4e-37 159.1 107 72.0
TPR.G4047 Trifolium pratense HOM05D000361 ORTHO05D005006 2.4e-37 159.1 106 72.6
Migut.D00627 Erythranthe guttata HOM05D000361 ORTHO05D005006 3.2e-37 158.7 106 71.7
Oeu040555.1 Olea europaea HOM05D000361 ORTHO05D005006 3.2e-37 158.7 106 74.5
Psat3g019960 Pisum sativum HOM05D000361 ORTHO05D005006 3.2e-37 158.7 106 73.6
PGSC0003DMG400009040 Solanum tuberosum HOM05D000361 ORTHO05D005006 3.2e-37 158.7 106 69.8
Atru.chr5.1004 Acer truncatum HOM05D000361 ORTHO05D005006 4.2e-37 158.3 106 70.8
HanXRQChr06g0168201 Helianthus annuus HOM05D000361 ORTHO05D005006 7.1e-37 157.5 106 70.8
Medtr7g109480 Medicago truncatula HOM05D000361 ORTHO05D005006 7.1e-37 157.5 107 70.1
Eucgr.H01043 Eucalyptus grandis HOM05D000361 ORTHO05D005006 9.3e-37 157.1 107 72.0
FAN04G2249 Fragaria x ananassa HOM05D000361 ORTHO05D005006 9.3e-37 157.1 107 72.0
Phvul.001G212600 Phaseolus vulgaris HOM05D000361 ORTHO05D005006 9.3e-37 157.1 107 72.0
ECA236G0422 Erigeron canadensis HOM05D000361 ORTHO05D005006 1.2e-36 156.8 105 72.4
CARHR249620 Cardamine hirsuta HOM05D000361 ORTHO05D005006 1.6e-36 156.4 121 65.3
FAN08G1249 Fragaria x ananassa HOM05D000361 ORTHO05D005006 1.6e-36 156.4 107 72.0
Peaxi162Scf00691g00215 Petunia axillaris HOM05D000361 ORTHO05D005006 1.6e-36 156.4 120 65.0
CAN.G777.10 Capsicum annuum HOM05D000361 ORTHO05D005006 2.1e-36 156.0 106 67.9
FAN18G2212 Fragaria x ananassa HOM05D000361 ORTHO05D005006 2.1e-36 156.0 107 72.0
Nitab4.5_0001301g0020 Nicotiana tabacum HOM05D000361 ORTHO05D005006 2.1e-36 156.0 106 70.8
AL6G51180 Arabidopsis lyrata HOM05D000361 ORTHO05D005006 3.5e-36 155.2 120 67.5
AT4G02060 Arabidopsis thaliana HOM05D000361 ORTHO05D005006 3.5e-36 155.2 120 66.7
MSTRG.18104 Avicennia marina HOM05D000361 ORTHO05D005006 3.5e-36 155.2 106 70.8
SGA_v2.0_scaffold8G04571 Striga asiatica HOM05D000361 ORTHO05D005006 3.5e-36 155.2 106 68.9
THA.LOC104801305 Tarenaya hassleriana HOM05D000361 ORTHO05D005006 3.5e-36 155.2 106 68.9
EL10As5g23528 Beta vulgaris HOM05D000361 ORTHO05D005006 4.6e-36 154.8 107 69.2
FvH4_5g39230 Fragaria vesca HOM05D000361 ORTHO05D005006 4.6e-36 154.8 107 71.0
VMungo1383G3610 Vigna mungo HOM05D000361 ORTHO05D005006 6.0e-36 154.5 107 72.0
Zm00001eb028400 Zea mays HOM05D000361 ORTHO05D005006 6.0e-36 154.5 117 65.8
Ah.02g112300 Amaranthus hybridus HOM05D000361 ORTHO05D005006 1.0e-35 153.7 120 63.3
PSO170G2199 Papaver somniferum HOM05D000361 ORTHO05D005006 1.0e-35 153.7 106 71.7
PSO357G0136 Papaver somniferum HOM05D000361 ORTHO05D005006 1.0e-35 153.7 106 71.7
Lalb_Chr04g0259941 Lupinus albus HOM05D000361 ORTHO05D005006 1.8e-35 152.9 106 68.9
Hund09629 Selenicereus undatus HOM05D000361 ORTHO05D005006 1.8e-35 152.9 106 68.9
ClCG09G005120 Citrullus lanatus HOM05D000361 ORTHO05D005006 2.3e-35 152.5 120 63.3
PGR119G0744 Punica granatum HOM05D000361 ORTHO05D005006 2.3e-35 152.5 106 69.8
Thhalv10028471m.g Eutrema salsugineum HOM05D000361 ORTHO05D005006 3.0e-35 152.1 121 65.3
Prupe.8G272000 Prunus persica HOM05D000361 ORTHO05D005006 3.0e-35 152.1 105 68.6
Zm00001eb137000 Zea mays HOM05D000361 ORTHO05D005006 3.9e-35 151.8 117 65.8
Cc01_g21380 Coffea canephora HOM05D000361 ORTHO05D005006 6.7e-35 151.0 106 70.8
Sc24g0003240 Simmondsia chinensis HOM05D000361 ORTHO05D005006 6.7e-35 151.0 106 67.9
Nitab4.5_0011075g0010 Nicotiana tabacum HOM05D000361 ORTHO05D005006 8.7e-35 150.6 114 65.8
BraA03t12307Z Brassica rapa HOM05D000361 ORTHO05D005006 1.1e-34 150.2 123 65.0
ATR0706G090 Amborella trichopoda HOM05D000361 ORTHO05D005006 1.9e-34 149.4 107 67.3
Lsat_1_v5_gn_7_101281 Lactuca sativa HOM05D000361 ORTHO05D005006 1.9e-34 149.4 106 67.9
Lj1g0011090 Lotus japonicus HOM05D000361 ORTHO05D005006 1.9e-34 149.4 107 66.4
SEGI_35774 Sequoiadendron giganteum HOM05D000361 ORTHO05D005006 1.9e-34 149.4 107 68.2
A03p31270 Brassica napus HOM05D000361 ORTHO05D005006 2.5e-34 149.1 123 64.2
C03p38170 Brassica napus HOM05D000361 ORTHO05D005006 2.5e-34 149.1 123 64.2
BolC3t16098H Brassica oleracea HOM05D000361 ORTHO05D005006 2.5e-34 149.1 123 64.2
Aqoxy2G02772 Aquilegia oxysepala HOM05D000361 ORTHO05D005006 4.3e-34 148.3 105 67.6
MD01G1012600 Malus domestica HOM05D000361 ORTHO05D005006 5.6e-34 147.9 106 65.1
Sp6g01940 Schrenkiella parvula HOM05D000361 ORTHO05D005006 5.6e-34 147.9 120 64.2
Os12g0560700 Oryza sativa ssp. japonica HOM05D000361 ORTHO05D005006 7.4e-34 147.5 108 66.7
Cpa.g.sc18.41 Carica papaya HOM05D000361 ORTHO05D005006 1.3e-33 146.7 105 68.6
SEGI_30867 Sequoiadendron giganteum HOM05D000361 ORTHO05D005006 1.3e-33 146.7 107 68.2
BcaC01g06779 Brassica carinata HOM05D000361 ORTHO05D005006 1.6e-33 146.4 123 63.4
MD03G1295400 Malus domestica HOM05D000361 ORTHO05D005006 2.8e-33 145.6 106 65.1
DCAR_005763 Daucus carota HOM05D000361 ORTHO05D005006 4.8e-33 144.8 105 63.8
BcaB01g02083 Brassica carinata HOM05D000361 ORTHO05D005006 6.2e-33 144.4 123 63.4
BcaB01g02413 Brassica carinata HOM05D000361 ORTHO05D005006 8.2e-33 144.1 106 68.9
BcaC04g24032 Brassica carinata HOM05D000361 ORTHO05D005006 1.4e-32 143.3 123 62.6
BolC9t53096H Brassica oleracea HOM05D000361 ORTHO05D005006 1.4e-32 143.3 123 62.6
BraA09t35812Z Brassica rapa HOM05D000361 ORTHO05D005006 1.4e-32 143.3 123 62.6
Carub.0006s3517 Capsella rubella HOM05D000361 ORTHO05D005006 1.8e-32 142.9 120 62.5
BcaB01g02409 Brassica carinata HOM05D000361 ORTHO05D005006 2.4e-32 142.5 105 68.6
Gohir.D08G140250 Gossypium hirsutum HOM05D000361 ORTHO05D005006 2.4e-32 142.5 106 65.1
A09p01520 Brassica napus HOM05D000361 ORTHO05D005006 4.0e-32 141.7 123 61.8
C09p01630 Brassica napus HOM05D000361 ORTHO05D005006 4.0e-32 141.7 123 61.8
SalBow2G0319 Salvia bowleyana HOM05D000361 ORTHO05D005006 1.7e-30 136.3 116 60.3
Migut.L00246 Erythranthe guttata HOM05D000361 ORTHO05D005006 1.9e-29 132.9 106 62.3
Rhsim01G0290500 Rhododendron simsii HOM05D000361 ORTHO05D005006 3.2e-29 132.1 102 65.7
Cfa005802 Carpinus fangiana HOM05D000361 ORTHO05D005006 6.0e-28 127.9 101 61.4
Rhsim04G0219200 Rhododendron simsii HOM05D000361 ORTHO05D005006 9.7e-26 120.6 106 60.4
AUR62024658 Chenopodium quinoa HOM05D000361 ORTHO05D005006 2.4e-24 115.9 107 57.9
SMO367G1185 Selaginella moellendorffii HOM05D000361 ORTHO05D005006 6.9e-24 114.4 105 53.3
unitig_0.g278 Utricularia gibba HOM05D000361 ORTHO05D005006 2.6e-23 112.5 105 56.2
Mapoly0075s0022 Marchantia polymorpha HOM05D000361 ORTHO05D005006 6.5e-22 107.8 105 50.5
Pp3c11_23510 Physcomitrium patens HOM05D000361 ORTHO05D005006 1.2e-20 103.6 104 46.2
Actinidia20996 Actinidia chinensis HOM05D000361 ORTHO05D030931 4.3e-18 95.1 90 55.6
AagrBONN_evm.TU.Sc2ySwM_340.492 Anthoceros agrestis HOM05D000361 ORTHO05D005006 2.2e-17 92.8 104 48.1
Zm00001eb190100 Zea mays HOM05D000412 ORTHO05D000429 2.8e-17 92.4 97 53.6
Manes.01G227600 Manihot esculenta HOM05D000361 ORTHO05D005006 6.3e-17 91.3 106 50.9
FAN13G2584 Fragaria x ananassa HOM05D000361 ORTHO05D005006 4.1e-16 88.6 107 50.5
CBR_g49870 Chara braunii HOM05D000361 ORTHO05D005006 7.7e-15 84.3 125 40.0
Gorai.004G144300 Gossypium raimondii HOM05D000361 ORTHO05D005006 1.0e-14 84.0 64 65.6
MD11G1314500 Malus domestica HOM05D000361 ORTHO05D030931 3.0e-11 72.4 49 67.3
MCO01G344 Micromonas commoda HOM05D000361 ORTHO05D005006 3.9e-11 72.0 117 39.3
Cre10.g455850 Chlamydomonas reinhardtii HOM05D000361 ORTHO05D005006 1.4e-08 63.5 107 34.6
PRCOL_00004712 Prasinoderma coloniale HOM05D000361 ORTHO05D005006 2.4e-08 62.8 111 35.1


User provided reference genes

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