Gene: Solyc01g079500.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc01g079500.4
- Transcript Identifier Solyc01g079500.4.1
- Gene Type Coding gene
- Location SL4.0ch01 : 71127766-71133541 : positive
Gene Family Information
- ID HOM05D000361
- #Genes/#Species 1321/100
- Phylogenetic origin
- ID ORTHO05D005006
- #Genes/#Species 166/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc01g079500.4.1
- uniprot A0A3Q7EHQ6
- gene_id Solyc01g079500
Descriptions
- Description DNA replication licensing factor MCM7 (AHRD V3.3 *** A0A1U8FE76_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048193 | IBA | GOA Database | Golgi vesicle transport | |
| GO:0007030 | IBA IEA | GOA Database | Golgi organization | |
| GO:0007041 | IBA | GOA Database | lysosomal transport | |
| GO:0032456 | IBA IEA | GOA Database | endocytic recycling | |
| GO:0009790 | ISO | PLAZA Integrative Orthology | embryo development | AT4G02060 |
| GO:0042147 | IBA IEA | GOA Database | retrograde transport, endosome to Golgi | |
| GO:0010182 | ISO | PLAZA Integrative Orthology | sugar mediated signaling pathway | AT4G02060 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT4G02060 |
| GO:0006268 | ISO | PLAZA Integrative Orthology | DNA unwinding involved in DNA replication | AT4G02060 |
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0006869 | IEA | GOA Database | lipid transport | |
| GO:0006270 | IEA | InterPro | DNA replication initiation | |
| GO:0032508 | IEA | InterPro | DNA duplex unwinding |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G02060 |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003678 | IEA | InterPro | DNA helicase activity | |
| GO:0005524 | IEA | InterPro | ATP binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT4G02060 |
| GO:0000938 | IBA IEA | GOA Database | GARP complex | |
| GO:0016020 | IBA IEA | GOA Database | membrane | |
| GO:1990745 | IBA | GOA Database | EARP complex | |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G02060 |
| GO:0000347 | ISO | PLAZA Integrative Orthology | THO complex | AT4G02060 |
| GO:0000785 | ISO | PLAZA Integrative Orthology | chromatin | AT4G02060 |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005794 | IEA | GOA Database | Golgi apparatus | |
| GO:0005829 | IEA | GOA Database | cytosol | |
| GO:0042555 | IEA | InterPro | MCM complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027925 | MCM N-terminal domain |
| IPR033762 | MCM OB domain |
| IPR031327 | Mini-chromosome maintenance protein |
| IPR008050 | DNA replication licensing factor Mcm7 |
| IPR041562 | MCM, AAA-lid domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR012340 | Nucleic acid-binding, OB-fold |
| IPR001208 | MCM domain |
| IPR003593 | AAA+ ATPase domain |
| Mapman id | Description |
|---|---|
| 13.2.1.2.6 | Cell cycle organisation.DNA replication.preinitiation.MCM replicative DNA helicase complex.component MCM7 |