Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009349 Vanilla planifolia HOM05D006818 ORTHO05D008674 1.7e-148 529.3 259 100.0
ATR0752G046 Amborella trichopoda HOM05D006818 ORTHO05D008674 6.6e-116 421.0 231 84.8
Oeu005459.1 Olea europaea HOM05D006818 ORTHO05D008674 2.5e-115 419.1 243 82.7
Manes.15G074101 Manihot esculenta HOM05D006818 ORTHO05D008674 4.3e-115 418.3 256 78.5
COL.COLO4_09629 Corchorus olitorius HOM05D006818 ORTHO05D008674 1.1e-113 413.7 233 83.7
Gohir.A01G077200 Gossypium hirsutum HOM05D006818 ORTHO05D008674 5.2e-113 411.4 256 77.3
Gorai.002G085600 Gossypium raimondii HOM05D006818 ORTHO05D008674 5.2e-113 411.4 256 77.3
Gohir.D01G064700 Gossypium hirsutum HOM05D006818 ORTHO05D008674 2.0e-112 409.5 256 77.0
Ah.06g195870 Amaranthus hybridus HOM05D006818 ORTHO05D008674 7.5e-112 407.5 234 82.1
Sc06g0005170 Simmondsia chinensis HOM05D006818 ORTHO05D008674 1.3e-111 406.8 257 75.9
Glyma.14G025600 Glycine max HOM05D006818 ORTHO05D008674 2.9e-111 405.6 236 80.5
Cpa.g.sc97.37 Carica papaya HOM05D006818 ORTHO05D008674 4.9e-111 404.8 241 79.3
Zm00001eb070100 Zea mays HOM05D006818 ORTHO05D008674 8.3e-111 404.1 231 81.8
Thecc.07G044200 Theobroma cacao HOM05D006818 ORTHO05D008674 1.1e-110 403.7 232 81.5
Ciclev10008835m.g Citrus clementina HOM05D006818 ORTHO05D008674 1.4e-110 403.3 234 81.2
Phvul.008G265400 Phaseolus vulgaris HOM05D006818 ORTHO05D008674 1.9e-110 402.9 253 75.5
Glyma.02G289400 Glycine max HOM05D006818 ORTHO05D008674 4.1e-110 401.7 236 79.7
Hund07318 Selenicereus undatus HOM05D006818 ORTHO05D008674 4.1e-110 401.7 230 81.7
CAN.G315.6 Capsicum annuum HOM05D006818 ORTHO05D008674 5.4e-110 401.4 242 77.7
Sed0006226 Sechium edule HOM05D006818 ORTHO05D008674 7.0e-110 401.0 235 80.4
Nitab4.5_0000653g0090 Nicotiana tabacum HOM05D006818 ORTHO05D008674 1.2e-109 400.2 237 79.3
Os04g0626400 Oryza sativa ssp. japonica HOM05D006818 ORTHO05D008674 1.2e-109 400.2 231 81.0
Peaxi162Scf01097g00023 Petunia axillaris HOM05D006818 ORTHO05D008674 1.2e-109 400.2 238 79.0
QL08p011921 Quercus lobata HOM05D006818 ORTHO05D008674 1.6e-109 399.8 233 80.3
Cc05_g13490 Coffea canephora HOM05D006818 ORTHO05D008674 2.7e-109 399.1 248 77.8
Duzib213G0630 Durio zibethinus HOM05D006818 ORTHO05D008674 2.7e-109 399.1 243 79.4
CSS0009238 Camellia sinensis var. sinensis HOM05D006818 ORTHO05D008674 3.5e-109 398.7 256 75.4
MBI18_g06645_MAGBIO Magnolia biondii HOM05D006818 ORTHO05D008674 3.5e-109 398.7 231 82.3
Nitab4.5_0000749g0100 Nicotiana tabacum HOM05D006818 ORTHO05D008674 3.5e-109 398.7 237 78.9
QL08p012092 Quercus lobata HOM05D006818 ORTHO05D008674 4.6e-109 398.3 232 79.7
MSTRG.6906 Avicennia marina HOM05D006818 ORTHO05D008674 6.0e-109 397.9 233 80.3
CANSAT25G1970 Cannabis sativa HOM05D006818 ORTHO05D008674 7.8e-109 397.5 243 78.2
CsaV3_3G023260 Cucumis sativus L. HOM05D006818 ORTHO05D008674 1.0e-108 397.1 235 78.7
CDE01G0156 Ceratophyllum demersum HOM05D006818 ORTHO05D008674 1.3e-108 396.7 251 76.5
Sabra16G0285700 Salix brachista HOM05D006818 ORTHO05D008674 1.3e-108 396.7 238 80.3
MELO3C018077.2 Cucumis melo HOM05D006818 ORTHO05D008674 1.7e-108 396.4 235 78.7
PGR031G1507 Punica granatum HOM05D006818 ORTHO05D008674 1.7e-108 396.4 252 75.4
ClCG05G014460 Citrullus lanatus HOM05D006818 ORTHO05D008674 2.3e-108 396.0 235 78.7
Lalb_Chr04g0248591 Lupinus albus HOM05D006818 ORTHO05D008674 3.0e-108 395.6 232 78.9
GSVIVG01001999001 Vitis vinifera HOM05D006818 ORTHO05D008674 3.0e-108 395.6 232 78.9
Atru.BG.12.p Acer truncatum HOM05D006818 ORTHO05D008674 8.6e-108 394.0 232 81.9
TWI39G0401 Tripterygium wilfordii HOM05D006818 ORTHO05D008674 1.5e-107 393.3 247 75.3
Sopen12g001170 Solanum pennellii HOM05D006818 ORTHO05D008674 2.5e-107 392.5 235 77.9
PGSC0003DMG400001099 Solanum tuberosum HOM05D006818 ORTHO05D008674 3.3e-107 392.1 235 77.9
VMungo0647G1753 Vigna mungo HOM05D006818 ORTHO05D008674 3.3e-107 392.1 235 77.9
Dinv22282 Davidia involucrata HOM05D006818 ORTHO05D008674 4.3e-107 391.7 256 73.8
Eucgr.F03445 Eucalyptus grandis HOM05D006818 ORTHO05D008674 5.6e-107 391.3 241 76.3
Potri.001G420800 Populus trichocarpa HOM05D006818 ORTHO05D008674 7.3e-107 391.0 238 78.2
Ca_06305_v3 Cicer arietinum L. HOM05D006818 ORTHO05D008674 1.2e-106 390.2 232 77.6
Lj8A167T47 Lonicera japonica HOM05D006818 ORTHO05D008674 1.2e-106 390.2 236 78.0
SpUn0103_0020 Schrenkiella parvula HOM05D006818 ORTHO05D008674 1.6e-106 389.8 234 78.2
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 2.1e-106 389.4 231 80.1
MD11G1222300 Malus domestica HOM05D006818 ORTHO05D008674 2.1e-106 389.4 232 77.6
EL10Ac4g09438 Beta vulgaris HOM05D006818 ORTHO05D008674 2.8e-106 389.0 250 76.0
RcHm_v2.0_Chr5g0037981 Rosa chinensis HOM05D006818 ORTHO05D008674 4.7e-106 388.3 232 78.9
Solyc12g005180.2 Solanum lycopersicum HOM05D006818 ORTHO05D008674 4.7e-106 388.3 235 77.0
BolC3t18966H Brassica oleracea HOM05D006818 ORTHO05D008674 8.1e-106 387.5 234 76.9
Nn1g07100 Nelumbo nucifera HOM05D006818 ORTHO05D008674 1.1e-105 387.1 232 80.2
A06p27360 Brassica napus HOM05D006818 ORTHO05D008674 1.8e-105 386.3 234 76.5
BraA06t25672Z Brassica rapa HOM05D006818 ORTHO05D008674 1.8e-105 386.3 234 76.5
Prupe.4G208600 Prunus persica HOM05D006818 ORTHO05D008674 1.8e-105 386.3 241 75.9
BcaC01g02294 Brassica carinata HOM05D006818 ORTHO05D008674 3.1e-105 385.6 234 76.5
C03p66930 Brassica napus HOM05D006818 ORTHO05D008674 3.1e-105 385.6 234 76.5
TAR627G0163 Trochodendron aralioides HOM05D006818 ORTHO05D008674 3.1e-105 385.6 232 78.0
SGA_v2.0_scaffold80G25946 Striga asiatica HOM05D006818 ORTHO05D008674 6.8e-105 384.4 238 76.5
CiPaw.11G186900 Carya illinoinensis HOM05D006818 ORTHO05D008674 1.2e-104 383.6 251 73.3
BcaB02g10686 Brassica carinata HOM05D006818 ORTHO05D008674 2.0e-104 382.9 234 75.6
QL08p012107 Quercus lobata HOM05D006818 ORTHO05D008674 2.0e-104 382.9 232 77.2
Carub.0005s1401 Capsella rubella HOM05D006818 ORTHO05D008674 3.4e-104 382.1 234 76.5
Atru.chr2.3275 Acer truncatum HOM05D006818 ORTHO05D008674 4.4e-104 381.7 238 76.1
AL5G27200 Arabidopsis lyrata HOM05D006818 ORTHO05D008674 5.8e-104 381.3 234 75.2
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 5.8e-104 381.3 256 72.3
Thhalv10010497m.g Eutrema salsugineum HOM05D006818 ORTHO05D008674 7.5e-104 380.9 234 75.2
DCAR_022551 Daucus carota HOM05D006818 ORTHO05D008674 1.3e-103 380.2 233 77.3
Migut.M01786 Erythranthe guttata HOM05D006818 ORTHO05D008674 1.7e-103 379.8 238 74.4
FvH4_3g22121 Fragaria vesca HOM05D006818 ORTHO05D008674 1.7e-103 379.8 256 71.9
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 1.7e-103 379.8 256 71.9
Medtr5g092080 Medicago truncatula HOM05D006818 ORTHO05D008674 1.7e-103 379.8 232 76.3
Rhsim06G0214800 Rhododendron simsii HOM05D006818 ORTHO05D008674 1.7e-103 379.8 233 76.8
AUR62006731 Chenopodium quinoa HOM05D006818 ORTHO05D008674 3.7e-103 378.6 216 82.4
AT3G47860 Arabidopsis thaliana HOM05D006818 ORTHO05D008674 1.1e-102 377.1 234 75.2
arahy.Tifrunner.gnm1.ann1.37S2BM Arachis hypogaea HOM05D006818 ORTHO05D008674 3.2e-102 375.6 237 75.1
arahy.Tifrunner.gnm1.ann1.D1ZW30 Arachis hypogaea HOM05D006818 ORTHO05D008674 3.2e-102 375.6 237 75.1
Aqoxy1G03627 Aquilegia oxysepala HOM05D006818 ORTHO05D008674 4.1e-102 375.2 232 76.7
LjContig00308g0005180 Lotus japonicus HOM05D006818 ORTHO05D008674 4.1e-102 375.2 254 70.1
Psat2g015280 Pisum sativum HOM05D006818 ORTHO05D008674 2.7e-101 372.5 236 73.7
Lsat_1_v5_gn_7_109080 Lactuca sativa HOM05D006818 ORTHO05D008674 3.5e-101 372.1 232 76.3
unitig_62.g23277 Utricularia gibba HOM05D006818 ORTHO05D008674 3.5e-101 372.1 253 70.4
HanXRQChr15g0494291 Helianthus annuus HOM05D006818 ORTHO05D008674 4.6e-101 371.7 232 76.7
ECA236G4406 Erigeron canadensis HOM05D006818 ORTHO05D008674 1.7e-100 369.8 235 74.9
PSO832G0412 Papaver somniferum HOM05D006818 ORTHO05D008674 5.1e-100 368.2 251 72.9
Aa31LG4G16540 Aethionema arabicum HOM05D006818 ORTHO05D008674 1.9e-99 366.3 256 68.0
PSO210G7832 Papaver somniferum HOM05D006818 ORTHO05D008674 1.9e-99 366.3 253 72.3
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 2.1e-98 362.8 243 72.0
MD03G1208100 Malus domestica HOM05D006818 ORTHO05D008674 4.2e-94 348.6 283 61.5
Sp5g14080 Schrenkiella parvula HOM05D006818 ORTHO05D008674 1.6e-93 346.7 200 81.0
Actinidia05109 Actinidia chinensis HOM05D006818 ORTHO05D008674 9.0e-89 330.9 240 67.9
SMO147G0254 Selaginella moellendorffii HOM05D006818 ORTHO05D008674 4.2e-86 322.0 230 64.3
AUR62000376 Chenopodium quinoa HOM05D006818 ORTHO05D008674 2.1e-85 319.7 189 80.4
Mapoly0115s0028 Marchantia polymorpha HOM05D006818 ORTHO05D008674 2.7e-85 319.3 231 63.2
vmacro11742 Vaccinium macrocarpon HOM05D006818 ORTHO05D008674 3.3e-83 312.4 243 65.0
Hma1.2p1_1271F.1_g271840 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 1.2e-80 303.9 180 80.6
Hma1.2p1_1609F.1_g293429 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 1.2e-80 303.9 180 80.6
Pp3c9_6110 Physcomitrium patens HOM05D006818 ORTHO05D008674 1.8e-76 290.0 236 58.5
TPR.G29121 Trifolium pratense HOM05D006818 ORTHO05D008674 3.7e-66 255.8 196 63.8
AagrBONN_evm.TU.Sc2ySwM_228.3024 Anthoceros agrestis HOM05D006818 ORTHO05D008674 9.0e-65 251.1 190 62.6
SEGI_29406 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 9.0e-65 251.1 140 79.3
TPR.G12727 Trifolium pratense HOM05D006818 ORTHO05D008674 1.5e-64 250.4 156 76.3
CBR_g57971 Chara braunii HOM05D006818 ORTHO05D008674 5.9e-56 221.9 201 56.2
TPR.G29124 Trifolium pratense HOM05D006818 ORTHO05D008674 1.3e-55 220.7 149 71.8
PRCOL_00005879 Prasinoderma coloniale HOM05D006818 ORTHO05D008674 9.1e-41 171.4 192 46.9
Glyma.14G153300 Glycine max HOM05D006818 ORTHO05D008674 1.1e-30 137.9 78 79.5
Actinidia09914 Actinidia chinensis HOM05D006818 ORTHO05D008674 5.7e-19 99.0 66 72.7
RcHm_v2.0_Chr3g0496801 Rosa chinensis HOM05D006818 ORTHO05D008674 4.1e-17 92.8 67 64.2
Ah.06g195920 Amaranthus hybridus HOM05D001023 ORTHO05D000912 8.0e-13 78.6 40 87.5
SEGI_26249 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 3.2e-09 66.6 54 61.1
CAN.G520.7 Capsicum annuum HOM05D003204 ORTHO05D003566 7.8e-08 62.0 167 29.9
Atru.chr7.159 Acer truncatum HOM05D003204 ORTHO05D003566 3.9e-07 59.7 168 31.0
Lalb_Chr07g0179701 Lupinus albus HOM05D003204 ORTHO05D003566 2.5e-06 57.0 167 28.1
MD02G1010500 Malus domestica HOM05D003204 ORTHO05D003566 2.5e-06 57.0 167 27.5
Ah.09g226600 Amaranthus hybridus HOM05D003204 ORTHO05D003566 3.3e-06 56.6 167 28.1
THA.LOC104811838 Tarenaya hassleriana HOM05D003204 ORTHO05D003566 3.3e-06 56.6 170 27.6
Mapoly0161s0027 Marchantia polymorpha HOM05D003204 ORTHO05D003566 7.3e-06 55.5 174 28.7
CAN.G520.3 Capsicum annuum HOM05D003204 ORTHO05D003566 9.5e-06 55.1 166 28.3


User provided reference genes

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