Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009257 Vanilla planifolia HOM05D006162 ORTHO05D007627 3.8e-290 1000.7 487 100.0
MBI17_g27203_MAGBIO Magnolia biondii HOM05D006162 ORTHO05D007627 8.6e-85 318.5 585 37.9
Zm00001eb082910 Zea mays HOM05D006162 ORTHO05D007627 3.6e-83 313.2 539 36.7
Gohir.A13G151700 Gossypium hirsutum HOM05D006162 ORTHO05D007627 7.1e-79 298.9 549 37.2
TAR625G0476 Trochodendron aralioides HOM05D006162 ORTHO05D007627 7.1e-79 298.9 579 35.8
Gohir.D13G156100 Gossypium hirsutum HOM05D006162 ORTHO05D007627 2.1e-78 297.4 546 37.2
Gorai.013G176700 Gossypium raimondii HOM05D006162 ORTHO05D007627 2.1e-78 297.4 546 37.2
Duzib187G0444 Durio zibethinus HOM05D006162 ORTHO05D007627 1.1e-76 291.6 437 41.4
Aqoxy6G00404 Aquilegia oxysepala HOM05D006162 ORTHO05D007627 5.6e-76 289.3 547 36.4
QL06p031367 Quercus lobata HOM05D006162 ORTHO05D007627 1.6e-75 287.7 549 35.0
Thecc.07G145700 Theobroma cacao HOM05D006162 ORTHO05D007627 1.4e-74 284.6 558 36.2
Dinv05774 Davidia involucrata HOM05D006162 ORTHO05D007627 9.0e-74 282.0 553 35.1
Aa31LG6G15910 Aethionema arabicum HOM05D006162 ORTHO05D007627 7.6e-73 278.9 533 34.0
Eucgr.H04890 Eucalyptus grandis HOM05D006162 ORTHO05D007627 4.9e-72 276.2 546 35.0
RcHm_v2.0_Chr2g0118111 Rosa chinensis HOM05D006162 ORTHO05D007627 8.4e-72 275.4 576 33.2
Hund19624 Selenicereus undatus HOM05D006162 ORTHO05D007627 3.2e-71 273.5 534 34.8
Ciclev10025253m.g Citrus clementina HOM05D006162 ORTHO05D007627 4.2e-71 273.1 431 37.4
GSVIVG01022265001 Vitis vinifera HOM05D006162 ORTHO05D007627 5.4e-71 272.7 538 33.8
Cfa002788 Carpinus fangiana HOM05D006162 ORTHO05D007627 7.1e-71 272.3 558 34.4
CDE08G0720 Ceratophyllum demersum HOM05D006162 ORTHO05D007627 1.6e-70 271.2 423 38.8
Prupe.6G165900 Prunus persica HOM05D006162 ORTHO05D007627 1.6e-70 271.2 545 35.2
THA.LOC104824832 Tarenaya hassleriana HOM05D006162 ORTHO05D007627 2.7e-70 270.4 540 34.4
COL.COLO4_17421 Corchorus olitorius HOM05D000398 ORTHO05D007627 3.5e-70 270.0 575 33.2
FAN28G1724 Fragaria x ananassa HOM05D006162 ORTHO05D007627 3.9e-69 266.5 554 32.7
TWI79G1464 Tripterygium wilfordii HOM05D006162 ORTHO05D007627 5.1e-69 266.2 563 35.0
arahy.Tifrunner.gnm1.ann1.QP02N2 Arachis hypogaea HOM05D006162 ORTHO05D007627 1.1e-68 265.0 422 40.0
VMungo0251G2144 Vigna mungo HOM05D006162 ORTHO05D007627 1.1e-68 265.0 466 35.8
FAN23G1837 Fragaria x ananassa HOM05D006162 ORTHO05D007627 1.5e-68 264.6 538 33.8
Phvul.002G267600 Phaseolus vulgaris HOM05D006162 ORTHO05D007627 2.5e-68 263.8 464 34.7
Sopen04g022820 Solanum pennellii HOM05D006162 ORTHO05D007627 5.6e-68 262.7 575 33.6
arahy.Tifrunner.gnm1.ann1.2PK97N Arachis hypogaea HOM05D006162 ORTHO05D007627 7.4e-68 262.3 433 39.5
ClCG02G000880 Citrullus lanatus HOM05D006162 ORTHO05D007627 9.6e-68 261.9 426 38.3
MD01G1015800 Malus domestica HOM05D006162 ORTHO05D007627 1.3e-67 261.5 544 33.6
Sed0011946 Sechium edule HOM05D006162 ORTHO05D007627 1.6e-67 261.2 425 36.9
Peaxi162Scf00025g03226 Petunia axillaris HOM05D006162 ORTHO05D007627 2.1e-67 260.8 450 38.2
Cc07_g16680 Coffea canephora HOM05D006162 ORTHO05D007627 3.7e-67 260.0 546 33.7
Nitab4.5_0007426g0010 Nicotiana tabacum HOM05D006162 ORTHO05D007627 3.7e-67 260.0 547 33.5
ATR0584G096 Amborella trichopoda HOM05D006162 ORTHO05D007627 4.8e-67 259.6 566 32.5
Potri.007G077100 Populus trichocarpa HOM05D006162 ORTHO05D007627 6.2e-67 259.2 555 34.4
Solyc04g051410.4 Solanum lycopersicum HOM05D006162 ORTHO05D007627 8.1e-67 258.8 446 38.1
Rhsim08G0004700 Rhododendron simsii HOM05D006162 ORTHO05D007627 1.4e-66 258.1 442 37.3
CAN.G452.13 Capsicum annuum HOM05D006162 ORTHO05D007627 4.0e-66 256.5 528 32.4
Glyma.08G145100 Glycine max HOM05D006162 ORTHO05D007627 4.0e-66 256.5 474 35.0
Manes.12G145600 Manihot esculenta HOM05D006162 ORTHO05D007627 4.0e-66 256.5 498 34.3
TPR.G2184 Trifolium pratense HOM05D006162 ORTHO05D007627 6.9e-66 255.8 427 37.5
Nitab4.5_0000184g0020 Nicotiana tabacum HOM05D006162 ORTHO05D007627 9.0e-66 255.4 586 31.9
PGSC0003DMG400019694 Solanum tuberosum HOM05D006162 ORTHO05D007627 4.5e-65 253.1 448 37.5
ECA238G0813 Erigeron canadensis HOM05D006162 ORTHO05D007627 1.3e-64 251.5 408 39.0
Glyma.05G186500 Glycine max HOM05D006162 ORTHO05D007627 1.7e-64 251.1 482 34.9
Psat7g049400 Pisum sativum HOM05D006162 ORTHO05D007627 2.9e-64 250.4 464 36.0
EL10Ac6g15232 Beta vulgaris HOM05D006162 ORTHO05D007627 3.8e-64 250.0 421 38.2
AUR62003642 Chenopodium quinoa HOM05D006162 ORTHO05D007627 3.8e-64 250.0 549 32.8
Carub.0007s0129 Capsella rubella HOM05D006162 ORTHO05D007627 6.4e-64 249.2 549 32.4
Medtr8g092350 Medicago truncatula HOM05D006162 ORTHO05D007627 2.4e-63 247.3 528 33.7
Lj4g0017392 Lotus japonicus HOM05D006162 ORTHO05D007627 3.2e-63 246.9 428 37.1
Sp7g36490 Schrenkiella parvula HOM05D006162 ORTHO05D007627 4.2e-63 246.5 541 32.9
CsaV3_2G017830 Cucumis sativus L. HOM05D006162 ORTHO05D007627 7.1e-63 245.7 458 34.3
HanXRQChr14g0446061 Helianthus annuus HOM05D006162 ORTHO05D007627 1.2e-62 245.0 420 37.4
Lsat_1_v5_gn_2_67341 Lactuca sativa HOM05D006162 ORTHO05D007627 2.7e-62 243.8 521 33.2
Sc16g0004090 Simmondsia chinensis HOM05D006162 ORTHO05D007627 1.3e-61 241.5 418 36.6
BcaC01g00286 Brassica carinata HOM05D006162 ORTHO05D007627 2.3e-61 240.7 533 32.1
Ca_17673_v3 Cicer arietinum L. HOM05D006162 ORTHO05D007627 3.0e-61 240.4 463 34.8
Nn5g27123 Nelumbo nucifera HOM05D006162 ORTHO05D007627 3.0e-61 240.4 594 30.8
C03p77810 Brassica napus HOM05D006162 ORTHO05D007627 8.7e-61 238.8 536 32.1
BraA08t34318Z Brassica rapa HOM05D006162 ORTHO05D007627 1.1e-60 238.4 531 31.5
CiPaw.03G131500 Carya illinoinensis HOM05D006162 ORTHO05D007627 1.9e-60 237.7 534 32.4
A08p23610 Brassica napus HOM05D006162 ORTHO05D007627 3.3e-60 236.9 531 31.6
Thhalv10025021m.g Eutrema salsugineum HOM05D006162 ORTHO05D007627 4.3e-60 236.5 533 31.0
AT4G39370 Arabidopsis thaliana HOM05D006162 ORTHO05D007627 5.6e-60 236.1 536 32.6
BcaB03g12289 Brassica carinata HOM05D006162 ORTHO05D007627 7.4e-60 235.7 536 31.7
AL7G11390 Arabidopsis lyrata HOM05D006162 ORTHO05D007627 1.6e-59 234.6 533 31.9
BolC3t20037H Brassica oleracea HOM05D006162 ORTHO05D007627 2.8e-59 233.8 541 31.6
Haze_25085 Corylus avellana HOM05D006162 ORTHO05D007627 3.7e-59 233.4 628 31.1
Migut.H02454 Erythranthe guttata HOM05D006162 ORTHO05D007627 4.8e-59 233.0 459 35.5
Oeu001984.1 Olea europaea HOM05D006162 ORTHO05D007627 4.8e-59 233.0 421 36.1
PSO675G6781 Papaver somniferum HOM05D006162 ORTHO05D007627 1.1e-58 231.9 371 36.4
PSO541G4150 Papaver somniferum HOM05D006162 ORTHO05D007627 2.4e-58 230.7 371 36.1
unitig_899.g14618 Utricularia gibba HOM05D006162 ORTHO05D007627 1.5e-57 228.0 502 33.7
CANSAT01G0187 Cannabis sativa HOM05D006162 ORTHO05D007627 3.8e-56 223.4 545 31.9
FvH4_1g23260 Fragaria vesca HOM05D006162 ORTHO05D007627 3.8e-56 223.4 381 34.9
Ah.02g123760 Amaranthus hybridus HOM05D006162 ORTHO05D007627 6.5e-56 222.6 538 30.3
PGR102G2965 Punica granatum HOM05D006162 ORTHO05D007627 8.4e-56 222.2 544 31.2
Sabra07G0065000 Salix brachista HOM05D006162 ORTHO05D007627 9.7e-52 208.8 559 30.2
FAN26G3317 Fragaria x ananassa HOM05D006162 ORTHO05D007627 1.3e-51 208.4 412 34.2
SGA_v2.0_scaffold2G01268 Striga asiatica HOM05D006162 ORTHO05D007627 3.1e-50 203.8 528 31.1
CSS0015273 Camellia sinensis var. sinensis HOM05D006162 ORTHO05D007627 3.4e-49 200.3 490 31.8
Nitab4.5_0005242g0040 Nicotiana tabacum HOM05D006162 ORTHO05D007627 1.6e-46 191.4 401 32.2
Lj1g0027635 Lotus japonicus HOM05D006162 ORTHO05D007627 3.7e-43 180.3 266 38.7
SEGI_22619 Sequoiadendron giganteum HOM05D006162 ORTHO05D007627 2.4e-42 177.6 684 25.7
Cpa.g.sc72.50 Carica papaya HOM05D006162 ORTHO05D007627 3.1e-42 177.2 348 32.8
Lj1g0016947 Lotus japonicus HOM05D006162 ORTHO05D007627 3.1e-42 177.2 244 40.6
Atru.chr4.714 Acer truncatum HOM05D006162 ORTHO05D007627 6.9e-42 176.0 327 35.5
Lj4A860G2 Lonicera japonica HOM05D006162 ORTHO05D007627 2.0e-41 174.5 572 27.4
FAN19G1907 Fragaria x ananassa HOM05D006162 ORTHO05D007627 8.5e-40 169.1 518 27.8
DCAR_011465 Daucus carota HOM05D006162 ORTHO05D007627 7.2e-39 166.0 338 33.1
Lalb_Chr13g0296311 Lupinus albus HOM05D006162 ORTHO05D007627 7.9e-38 162.5 241 37.3
AUR62017952 Chenopodium quinoa HOM05D006162 ORTHO05D007627 8.8e-37 159.1 475 27.8
vmacro18056 Vaccinium macrocarpon HOM05D006162 ORTHO05D007627 9.1e-34 149.1 300 34.0
MELO3C020973.2 Cucumis melo HOM05D006162 ORTHO05D007627 1.7e-32 144.8 270 34.4
vmacro18055 Vaccinium macrocarpon HOM05D006162 ORTHO05D007627 1.4e-26 125.2 293 32.4
Hma1.2p1_1688F.1_g297590 Hydrangea macrophylla HOM05D006162 ORTHO05D007627 7.0e-26 122.9 153 42.5
Pp3c18_18540 Physcomitrium patens HOM05D006162 ORTHO05D007627 4.5e-25 120.2 259 31.3
Mapoly0008s0182 Marchantia polymorpha HOM05D006162 ORTHO05D007627 3.8e-24 117.1 274 26.3
AUR62044023 Chenopodium quinoa HOM05D006162 ORTHO05D007627 1.5e-23 115.2 303 28.4
Atru.chr4.715 Acer truncatum HOM05D006162 ORTHO05D007627 3.0e-21 107.5 225 33.8
CARHR247340 Cardamine hirsuta HOM05D006162 ORTHO05D007627 4.4e-20 103.6 223 31.4
CBR_g28670 Chara braunii HOM05D006162 ORTHO05D007627 9.1e-18 95.9 252 25.8
Lalb_Chr13g0296301 Lupinus albus HOM05D006162 ORTHO05D007627 1.6e-17 95.1 208 33.2
AagrBONN_evm.TU.Sc2ySwM_368.1435 Anthoceros agrestis HOM05D006162 ORTHO05D007627 5.9e-17 93.2 256 27.7
Cpa.g.sc72.51 Carica papaya HOM05D006162 ORTHO05D000563 1.5e-12 78.6 199 30.7
SMO340G0295 Selaginella moellendorffii HOM05D006162 ORTHO05D007627 2.0e-12 78.2 493 21.9
Nn5g27122 Nelumbo nucifera HOM05D006162 ORTHO05D007627 2.4e-10 71.2 201 28.4
Hma1.2p1_0220F.1_g092950 Hydrangea macrophylla HOM05D006162 ORTHO05D007627 3.5e-09 67.4 73 49.3
arahy.Tifrunner.gnm1.ann1.RXB70W Arachis hypogaea HOM05D005572 ORTHO05D007627 1.3e-08 65.5 66 48.5
DCAR_011464 Daucus carota HOM05D006162 ORTHO05D007627 3.8e-08 63.9 81 45.7
Lj1g0005085 Lotus japonicus HOM05D006162 ORTHO05D007627 3.8e-08 63.9 67 44.8
arahy.Tifrunner.gnm1.ann1.PN8NU7 Arachis hypogaea HOM05D006162 ORTHO05D007627 8.6e-08 62.8 74 41.9
Lsat_1_v5_gn_6_60801 Lactuca sativa HOM05D003912 ORTHO05D004409 8.6e-08 62.8 220 24.1
MD04G1009400 Malus domestica HOM05D003912 ORTHO05D004409 4.2e-07 60.5 218 25.7
arahy.Tifrunner.gnm1.ann1.NX5YGM Arachis hypogaea HOM05D006162 ORTHO05D007627 5.5e-07 60.1 81 42.0
Zm00001eb102350 Zea mays HOM05D003912 ORTHO05D004409 7.2e-07 59.7 217 22.1
arahy.Tifrunner.gnm1.ann1.1RFJ6T Arachis hypogaea HOM05D005572 ORTHO05D007627 1.2e-06 58.9 48 50.0
HPP92_013626 Vanilla planifolia HOM05D003912 ORTHO05D004409 1.2e-06 58.9 74 45.9
Aqoxy2G03850 Aquilegia oxysepala HOM05D003912 ORTHO05D004409 3.6e-06 57.4 255 22.7
MD13G1284700 Malus domestica HOM05D003912 ORTHO05D004409 4.7e-06 57.0 219 23.3
Nn1g07894 Nelumbo nucifera HOM05D003912 ORTHO05D004409 4.7e-06 57.0 273 22.7
unitig_747.g21697 Utricularia gibba HOM05D003912 ORTHO05D004409 4.7e-06 57.0 249 21.3
SGA_v2.0_scaffold626G53246 Striga asiatica HOM05D003912 ORTHO05D004409 6.1e-06 56.6 71 40.8
Zm00001eb187750 Zea mays HOM05D000344 ORTHO05D003292 6.1e-06 56.6 438 20.5


User provided reference genes

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