Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006862 Vanilla planifolia HOM05D005979 ORTHO05D007848 1.8e-139 499.2 243 100.0
HPP92_006880 Vanilla planifolia HOM05D005979 ORTHO05D007848 1.6e-135 486.1 243 97.9
CDE06G1795 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 4.4e-106 388.3 243 75.3
CDE08G1123 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 9.9e-106 387.1 243 74.9
Nn7g36654 Nelumbo nucifera HOM05D005979 ORTHO05D007848 5.4e-104 381.3 243 73.7
Dinv35473 Davidia involucrata HOM05D005979 ORTHO05D007848 9.2e-104 380.6 243 72.8
MBI09_g07121_MAGBIO Magnolia biondii HOM05D005979 ORTHO05D007848 2.1e-103 379.4 243 72.4
Gorai.013G116500 Gossypium raimondii HOM05D005979 ORTHO05D007848 3.5e-103 378.6 243 72.4
Manes.09G007200 Manihot esculenta HOM05D005979 ORTHO05D007848 4.6e-103 378.3 243 71.2
GSVIVG01033606001 Vitis vinifera HOM05D005979 ORTHO05D007848 7.8e-103 377.5 243 71.6
ClCG09G016040 Citrullus lanatus HOM05D005979 ORTHO05D007848 2.3e-102 375.9 242 72.7
Gohir.D13G103900 Gossypium hirsutum HOM05D005979 ORTHO05D007848 3.0e-102 375.6 243 72.4
Gohir.A13G100300 Gossypium hirsutum HOM05D005979 ORTHO05D007848 6.6e-102 374.4 243 71.6
Thecc.05G139000 Theobroma cacao HOM05D005979 ORTHO05D007848 6.6e-102 374.4 243 71.2
TWI77G1019 Tripterygium wilfordii HOM05D005979 ORTHO05D007848 8.7e-102 374.0 241 71.8
Sed0017937 Sechium edule HOM05D005979 ORTHO05D007848 1.5e-101 373.2 242 71.5
Cpa.g.sc5.208 Carica papaya HOM05D005979 ORTHO05D007848 2.5e-101 372.5 242 71.1
Cc02_g19250 Coffea canephora HOM05D005979 ORTHO05D007848 3.3e-101 372.1 244 71.7
Ciclev10021922m.g Citrus clementina HOM05D005979 ORTHO05D007848 4.3e-101 371.7 244 70.9
Sc18g0002150 Simmondsia chinensis HOM05D005979 ORTHO05D007848 3.6e-100 368.6 243 69.1
Eucgr.K01638 Eucalyptus grandis HOM05D005979 ORTHO05D007848 8.1e-100 367.5 245 69.8
Ah.09g228190 Amaranthus hybridus HOM05D005979 ORTHO05D007848 1.1e-99 367.1 243 66.7
Duzib093G1926 Durio zibethinus HOM05D005979 ORTHO05D007848 1.4e-99 366.7 243 70.4
CiPaw.09G046000 Carya illinoinensis HOM05D005979 ORTHO05D007848 1.8e-99 366.3 243 69.1
HanXRQChr05g0144951 Helianthus annuus HOM05D005979 ORTHO05D007848 1.8e-99 366.3 243 69.1
CsaV3_4G027840 Cucumis sativus L. HOM05D005979 ORTHO05D007848 3.1e-99 365.5 242 70.7
RcHm_v2.0_Chr4g0414381 Rosa chinensis HOM05D005979 ORTHO05D007848 4.0e-99 365.2 244 68.0
FvH4_4g13730 Fragaria vesca HOM05D005979 ORTHO05D007848 5.3e-99 364.8 244 68.0
FAN12G2831 Fragaria x ananassa HOM05D005979 ORTHO05D007848 5.3e-99 364.8 244 68.0
THA.LOC104823212 Tarenaya hassleriana HOM05D005979 ORTHO05D007848 5.3e-99 364.8 241 69.3
CSS0035132 Camellia sinensis var. sinensis HOM05D005979 ORTHO05D007848 1.2e-98 363.6 243 69.5
FAN17G0168 Fragaria x ananassa HOM05D005979 ORTHO05D007848 1.5e-98 363.2 244 68.4
Gohir.D04G132100 Gossypium hirsutum HOM05D005979 ORTHO05D007848 4.4e-98 361.7 243 70.0
RcHm_v2.0_Chr6g0280571 Rosa chinensis HOM05D005979 ORTHO05D007848 5.8e-98 361.3 244 67.6
CAN.G637.20 Capsicum annuum HOM05D005979 ORTHO05D007848 9.9e-98 360.5 242 67.8
Actinidia40001 Actinidia chinensis HOM05D005979 ORTHO05D007848 1.7e-97 359.8 243 69.1
MD04G1012500 Malus domestica HOM05D005979 ORTHO05D007848 1.7e-97 359.8 244 68.4
Solyc03g098170.3 Solanum lycopersicum HOM05D005979 ORTHO05D007848 2.2e-97 359.4 244 68.0
Aqoxy2G00350 Aquilegia oxysepala HOM05D005979 ORTHO05D007848 2.9e-97 359.0 243 67.1
AUR62033954 Chenopodium quinoa HOM05D005979 ORTHO05D007848 2.9e-97 359.0 244 68.4
ECA232G1805 Erigeron canadensis HOM05D005979 ORTHO05D007848 2.9e-97 359.0 243 67.9
PGSC0003DMG400031053 Solanum tuberosum HOM05D005979 ORTHO05D007848 2.9e-97 359.0 244 68.0
Lsat_1_v5_gn_0_460 Lactuca sativa HOM05D005979 ORTHO05D007848 4.9e-97 358.2 241 68.0
Sopen03g028870 Solanum pennellii HOM05D005979 ORTHO05D007848 4.9e-97 358.2 244 68.0
Migut.B00389 Erythranthe guttata HOM05D005979 ORTHO05D007848 6.4e-97 357.8 243 66.7
TAR633G0311 Trochodendron aralioides HOM05D005979 ORTHO05D007848 6.4e-97 357.8 230 71.7
Oeu013750.3 Olea europaea HOM05D005979 ORTHO05D007848 1.1e-96 357.1 284 61.6
Potri.006G041400 Populus trichocarpa HOM05D005979 ORTHO05D007848 1.1e-96 357.1 242 67.8
Lalb_Chr02g0156521 Lupinus albus HOM05D005979 ORTHO05D007848 1.4e-96 356.7 244 67.6
VMungo0251G0166 Vigna mungo HOM05D005979 ORTHO05D007848 3.2e-96 355.5 244 68.0
Prupe.7G257800 Prunus persica HOM05D005979 ORTHO05D007848 7.1e-96 354.4 244 68.9
unitig_0.g99 Utricularia gibba HOM05D005979 ORTHO05D007848 9.3e-96 354.0 243 67.9
COL.COLO4_00190 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.2e-95 353.6 244 69.3
Lj5g0020498 Lotus japonicus HOM05D005979 ORTHO05D007848 1.2e-95 353.6 244 68.0
BcaB04g21222 Brassica carinata HOM05D005979 ORTHO05D007848 1.6e-95 353.2 241 67.6
ATR1134G092 Amborella trichopoda HOM05D005979 ORTHO05D007848 2.1e-95 352.8 243 68.3
Carub.0003s0939 Capsella rubella HOM05D005979 ORTHO05D007848 2.1e-95 352.8 241 68.0
AL3G21560 Arabidopsis lyrata HOM05D005979 ORTHO05D007848 3.5e-95 352.1 241 68.0
QL07p008776 Quercus lobata HOM05D005979 ORTHO05D007848 3.5e-95 352.1 258 64.3
Thhalv10021412m.g Eutrema salsugineum HOM05D005979 ORTHO05D007848 4.6e-95 351.7 242 67.4
CANSAT64G2596 Cannabis sativa HOM05D005979 ORTHO05D007848 6.0e-95 351.3 244 68.0
Cfa016688 Carpinus fangiana HOM05D005979 ORTHO05D007848 7.8e-95 350.9 243 66.3
Hma1.2p1_0075F.1_g039230 Hydrangea macrophylla HOM05D005979 ORTHO05D007848 1.3e-94 350.1 228 71.1
SGA_v2.0_scaffold32G13036 Striga asiatica HOM05D005979 ORTHO05D007848 1.3e-94 350.1 275 61.1
Sp3g08500 Schrenkiella parvula HOM05D005979 ORTHO05D007848 1.7e-94 349.7 242 66.1
Aa31LG3G2790 Aethionema arabicum HOM05D005979 ORTHO05D007848 2.3e-94 349.4 241 66.0
AT3G10220 Arabidopsis thaliana HOM05D005979 ORTHO05D007848 2.3e-94 349.4 241 67.2
Phvul.002G285700 Phaseolus vulgaris HOM05D005979 ORTHO05D007848 2.3e-94 349.4 244 66.8
Ca_23806_v3 Cicer arietinum L. HOM05D005979 ORTHO05D007848 3.0e-94 349.0 244 66.8
CARHR084710 Cardamine hirsuta HOM05D005979 ORTHO05D007848 5.1e-94 348.2 241 66.8
MELO3C019044.2 Cucumis melo HOM05D005979 ORTHO05D007848 1.1e-93 347.1 229 71.2
vmacro19992 Vaccinium macrocarpon HOM05D005979 ORTHO05D007848 1.5e-93 346.7 274 60.6
DCAR_001099 Daucus carota HOM05D005979 ORTHO05D007848 4.3e-93 345.1 243 65.0
Glyma.05G203800 Glycine max HOM05D005979 ORTHO05D007848 5.6e-93 344.7 244 66.0
Atru.chr1.1490 Acer truncatum HOM05D005979 ORTHO05D007848 1.3e-92 343.6 230 68.7
BraA05t22680Z Brassica rapa HOM05D005979 ORTHO05D007848 1.3e-92 343.6 242 66.1
Medtr0004s0600 Medicago truncatula HOM05D005979 ORTHO05D007848 1.6e-92 343.2 244 66.0
Psat6g123280 Pisum sativum HOM05D005979 ORTHO05D007848 1.6e-92 343.2 244 66.4
Rhsim05G0172800 Rhododendron simsii HOM05D005979 ORTHO05D007848 1.6e-92 343.2 295 57.3
BolC5t34447H Brassica oleracea HOM05D005979 ORTHO05D007848 2.1e-92 342.8 241 65.1
TPR.G19644 Trifolium pratense HOM05D005979 ORTHO05D007848 3.6e-92 342.0 244 66.4
A05p38880 Brassica napus HOM05D005979 ORTHO05D007848 6.2e-92 341.3 242 65.7
BcaNung05525 Brassica carinata HOM05D005979 ORTHO05D007848 1.8e-91 339.7 242 65.3
C05p57920 Brassica napus HOM05D005979 ORTHO05D007848 1.8e-91 339.7 242 65.3
Medtr1g051215 Medicago truncatula HOM05D005979 ORTHO05D007848 2.4e-91 339.3 244 64.8
Hund26899 Selenicereus undatus HOM05D005979 ORTHO05D007848 3.8e-89 332.0 253 61.7
EL10Ac8g19200 Beta vulgaris HOM05D005979 ORTHO05D007848 8.4e-89 330.9 240 62.9
PSO170G5780 Papaver somniferum HOM05D005979 ORTHO05D007848 2.3e-86 322.8 210 69.5
SalBow6G2287 Salvia bowleyana HOM05D005979 ORTHO05D007848 6.7e-86 321.2 327 51.1
Os04g0692100 Oryza sativa ssp. japonica HOM05D005979 ORTHO05D007848 5.6e-85 318.2 243 61.7
arahy.Tifrunner.gnm1.ann1.Y5SS6T Arachis hypogaea HOM05D005979 ORTHO05D007848 1.3e-84 317.0 244 62.3
Haze_19714 Corylus avellana HOM05D005979 ORTHO05D007848 4.8e-84 315.1 214 66.4
COL.COLO4_36506 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.1e-80 303.9 204 68.6
Mapoly0016s0206 Marchantia polymorpha HOM05D005979 ORTHO05D007848 2.5e-80 302.8 256 57.0
Gorai.012G115900 Gossypium raimondii HOM05D005979 ORTHO05D007848 3.2e-80 302.4 205 69.8
Zm00001eb076570 Zea mays HOM05D005979 ORTHO05D007848 1.2e-79 300.4 284 51.8
Prupe.1G158700 Prunus persica HOM05D005979 ORTHO05D007848 8.2e-76 287.7 205 66.3
Pp3c13_18250 Physcomitrium patens HOM05D005979 ORTHO05D007848 2.4e-75 286.2 246 53.3
AUR62029060 Chenopodium quinoa HOM05D005979 ORTHO05D007848 6.9e-75 284.6 243 56.8
Nitab4.5_0001180g0050 Nicotiana tabacum HOM05D005979 ORTHO05D007848 1.2e-74 283.9 300 49.3
Nitab4.5_0003715g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 2.6e-74 282.7 243 56.8
Lj2A41G64 Lonicera japonica HOM05D005979 ORTHO05D007848 4.6e-71 271.9 213 63.4
AagrBONN_evm.TU.Sc2ySwM_228.4763 Anthoceros agrestis HOM05D005979 ORTHO05D007848 7.7e-66 254.6 316 43.0
Cre15.g636300 Chlamydomonas reinhardtii HOM05D005979 ORTHO05D007848 2.5e-61 239.6 247 48.2
CBR_g30186 Chara braunii HOM05D005979 ORTHO05D007848 2.8e-60 236.1 259 45.2
AUR62032907 Chenopodium quinoa HOM05D005979 ORTHO05D007848 5.7e-53 211.8 250 45.6
MCO14G471 Micromonas commoda HOM05D005979 ORTHO05D007848 6.3e-52 208.4 253 45.1
PRCOL_00000740 Prasinoderma coloniale HOM05D005979 ORTHO05D007848 1.4e-51 207.2 240 42.5
Peaxi162Scf00171g00620 Petunia axillaris HOM05D005979 ORTHO05D007848 3.8e-49 199.1 340 37.9
Gohir.A04G092832 Gossypium hirsutum HOM05D005979 ORTHO05D007848 3.6e-47 192.6 147 66.0
Nitab4.5_0005200g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 1.4e-43 180.6 123 70.7
Sabra06G0028100 Salix brachista HOM05D005979 ORTHO05D007848 7.7e-42 174.9 107 69.2
BcaC09g48108 Brassica carinata HOM05D005979 ORTHO05D007848 7.0e-35 151.8 136 52.9
Nitab4.5_0005200g0030 Nicotiana tabacum HOM05D005979 ORTHO05D007848 3.5e-34 149.4 83 71.1
COL.COLO4_00246 Corchorus olitorius HOM05D005979 ORTHO05D007848 2.5e-32 143.3 96 69.8
FAN03G2583 Fragaria x ananassa HOM05D005979 ORTHO05D007848 3.4e-21 106.3 83 62.7
FAN08G3312 Fragaria x ananassa HOM05D005979 ORTHO05D007848 3.4e-21 106.3 83 62.7
SEGI_39367 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 4.4e-21 105.9 70 61.4
FAN25G1846 Fragaria x ananassa HOM05D005979 ORTHO05D007848 9.2e-19 98.2 74 64.9
SEGI_37896 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 1.8e-14 84.0 95 49.5
BraA01t04540Z Brassica rapa HOM05D005979 ORTHO05D007848 1.3e-12 77.8 51 68.6
Glyma.08G011202 Glycine max HOM05D005979 ORTHO05D007848 2.9e-12 76.6 69 50.7
A01p41070 Brassica napus HOM05D005979 ORTHO05D007848 6.4e-12 75.5 51 66.7
BNapus_Darmor_BZH_scaffold_78p00640 Brassica napus HOM05D005979 ORTHO05D007848 6.4e-12 75.5 51 66.7
A01p41990 Brassica napus HOM05D005979 ORTHO05D041676 5.4e-11 72.4 145 37.2
CBR_g27740 Chara braunii HOM05D000738 ORTHO05D000675 1.2e-10 71.2 73 38.4
BolC1t05773H Brassica oleracea HOM05D005979 ORTHO05D007848 3.3e-08 63.2 43 62.8
Cfa025444 Carpinus fangiana HOM05D005979 ORTHO05D122864 4.3e-08 62.8 67 43.3
PRCOL_00006618 Prasinoderma coloniale HOM05D000738 ORTHO05D000675 6.2e-07 58.9 70 35.7
BraA01t04267Z Brassica rapa HOM05D005979 ORTHO05D041676 8.0e-07 58.5 36 66.7
MCO15G211 Micromonas commoda HOM05D005625 ORTHO05D007564 8.0e-07 58.5 76 43.4
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 1.4e-06 57.8 65 40.0
Mapoly0057s0080 Marchantia polymorpha HOM05D005625 ORTHO05D007564 5.2e-06 55.8 68 38.2


User provided reference genes

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