Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006013 Vanilla planifolia HOM05D005846 ORTHO05D007369 7.3e-78 293.9 155 100.0
HPP92_002750 Vanilla planifolia HOM05D005846 ORTHO05D007369 2.7e-32 142.5 107 76.6
HPP92_027757 Vanilla planifolia HOM05D005846 ORTHO05D007369 2.7e-32 142.5 107 76.6
CiPaw.06G031700 Carya illinoinensis HOM05D005846 ORTHO05D007369 6.9e-20 101.3 107 52.3
TAR375G0515 Trochodendron aralioides HOM05D005846 ORTHO05D007369 9.0e-20 100.9 107 53.3
ClCG06G002930 Citrullus lanatus HOM05D005846 ORTHO05D007369 1.5e-19 100.1 107 51.4
CAN.G899.26 Capsicum annuum HOM05D005846 ORTHO05D007369 4.5e-19 98.6 107 50.5
Dinv44098 Davidia involucrata HOM05D005846 ORTHO05D007369 4.5e-19 98.6 107 51.4
QL04p035021 Quercus lobata HOM05D005846 ORTHO05D007369 4.5e-19 98.6 107 50.5
Aqoxy5G03824 Aquilegia oxysepala HOM05D005846 ORTHO05D007369 5.8e-19 98.2 107 49.5
Prupe.2G134200 Prunus persica HOM05D005846 ORTHO05D007369 7.6e-19 97.8 107 50.5
CsaV3_6G009050 Cucumis sativus L. HOM05D005846 ORTHO05D007369 1.0e-18 97.4 107 50.5
Manes.05G051500 Manihot esculenta HOM05D005846 ORTHO05D007369 1.0e-18 97.4 107 50.5
Peaxi162Scf00377g00722 Petunia axillaris HOM05D005846 ORTHO05D007369 1.0e-18 97.4 107 48.6
ATR0559G037 Amborella trichopoda HOM05D005846 ORTHO05D007369 1.3e-18 97.1 107 51.4
arahy.Tifrunner.gnm1.ann1.DPE9LE Arachis hypogaea HOM05D005846 ORTHO05D007369 1.3e-18 97.1 107 50.5
arahy.Tifrunner.gnm1.ann1.SA9NP4 Arachis hypogaea HOM05D005846 ORTHO05D007369 1.3e-18 97.1 107 50.5
Haze_02742 Corylus avellana HOM05D005846 ORTHO05D007369 1.3e-18 97.1 107 50.5
MD07G1110700 Malus domestica HOM05D005846 ORTHO05D007369 1.3e-18 97.1 107 50.5
VMungo1383G2837 Vigna mungo HOM05D005846 ORTHO05D007369 1.3e-18 97.1 107 49.5
ECA236G0469 Erigeron canadensis HOM05D005846 ORTHO05D007369 1.7e-18 96.7 107 49.5
HanXRQChr06g0168821 Helianthus annuus HOM05D005846 ORTHO05D007369 1.7e-18 96.7 107 49.5
MBI05_g14240_MAGBIO Magnolia biondii HOM05D005846 ORTHO05D007369 1.7e-18 96.7 107 50.5
Phvul.007G143350 Phaseolus vulgaris HOM05D005846 ORTHO05D007369 1.7e-18 96.7 107 49.5
Solyc01g090670.3 Solanum lycopersicum HOM05D005846 ORTHO05D007369 1.7e-18 96.7 107 47.7
Sopen01g036400 Solanum pennellii HOM05D005846 ORTHO05D007369 1.7e-18 96.7 107 47.7
CANSAT21G1379 Cannabis sativa HOM05D005846 ORTHO05D007369 2.2e-18 96.3 107 48.6
Potri.014G057000 Populus trichocarpa HOM05D005846 ORTHO05D007369 2.9e-18 95.9 107 49.5
SGA_v2.0_scaffold52G19202 Striga asiatica HOM05D005846 ORTHO05D007369 2.9e-18 95.9 107 49.5
DCAR_031886 Daucus carota HOM05D005846 ORTHO05D007369 3.8e-18 95.5 107 49.5
PSO541G5798 Papaver somniferum HOM05D005846 ORTHO05D007369 3.8e-18 95.5 107 48.6
PSO675G5996 Papaver somniferum HOM05D005846 ORTHO05D007369 3.8e-18 95.5 107 48.6
GSVIVG01018216001 Vitis vinifera HOM05D005846 ORTHO05D007369 3.8e-18 95.5 107 49.5
Sabra14G0041600 Salix brachista HOM05D002053 ORTHO05D002135 5.0e-18 95.1 107 49.5
Cfa011122 Carpinus fangiana HOM05D005846 ORTHO05D007369 6.5e-18 94.7 107 49.5
Ciclev10019079m.g Citrus clementina HOM05D005846 ORTHO05D007369 6.5e-18 94.7 107 49.5
Nn6g33892 Nelumbo nucifera HOM05D005846 ORTHO05D007369 6.5e-18 94.7 107 49.5
Hund27391 Selenicereus undatus HOM05D005846 ORTHO05D007369 6.5e-18 94.7 107 49.5
Duzib116G0440 Durio zibethinus HOM05D005846 ORTHO05D007369 8.4e-18 94.4 107 48.6
Cc02_g24740 Coffea canephora HOM05D005846 ORTHO05D007369 1.1e-17 94.0 107 49.5
PGR004G1251 Punica granatum HOM05D005846 ORTHO05D007369 1.1e-17 94.0 107 48.6
RcHm_v2.0_Chr1g0348261 Rosa chinensis HOM05D005846 ORTHO05D007369 1.1e-17 94.0 107 48.6
Sed0022623 Sechium edule HOM05D005846 ORTHO05D007369 1.1e-17 94.0 107 48.6
COL.COLO4_35176 Corchorus olitorius HOM05D005846 ORTHO05D007369 1.4e-17 93.6 107 48.6
Eucgr.D02512 Eucalyptus grandis HOM05D005846 ORTHO05D007369 1.4e-17 93.6 107 47.7
Gorai.007G156100 Gossypium raimondii HOM05D005846 ORTHO05D007369 1.4e-17 93.6 109 47.7
TWI14G0811 Tripterygium wilfordii HOM05D005846 ORTHO05D007369 1.9e-17 93.2 107 48.6
Ah.05g173450 Amaranthus hybridus HOM05D005846 ORTHO05D007369 3.2e-17 92.4 107 47.7
AUR62013700 Chenopodium quinoa HOM05D005846 ORTHO05D007369 3.2e-17 92.4 112 45.5
Glyma.01G074700 Glycine max HOM05D005846 ORTHO05D007369 3.2e-17 92.4 107 49.5
HanXRQChr04g0123471 Helianthus annuus HOM05D005846 ORTHO05D007369 3.2e-17 92.4 106 47.2
Nitab4.5_0001823g0090 Nicotiana tabacum HOM05D005846 ORTHO05D007369 3.2e-17 92.4 107 45.8
Nitab4.5_0003110g0060 Nicotiana tabacum HOM05D005846 ORTHO05D007369 3.2e-17 92.4 107 45.8
Lj1g0009878 Lotus japonicus HOM05D005846 ORTHO05D007369 4.2e-17 92.0 106 48.1
FAN03G1473 Fragaria x ananassa HOM05D005846 ORTHO05D007369 5.5e-17 91.7 107 46.7
FAN06G0321 Fragaria x ananassa HOM05D005846 ORTHO05D007369 5.5e-17 91.7 107 46.7
FAN10G1341 Fragaria x ananassa HOM05D005846 ORTHO05D007369 5.5e-17 91.7 107 46.7
FAN10G4209 Fragaria x ananassa HOM05D005846 ORTHO05D007369 5.5e-17 91.7 107 46.7
Glyma.11G162365 Glycine max HOM05D005846 ORTHO05D007369 5.5e-17 91.7 107 48.6
Lj9C561G11 Lonicera japonica HOM05D005846 ORTHO05D007369 5.5e-17 91.7 107 48.6
Medtr7g045280 Medicago truncatula HOM05D005846 ORTHO05D007369 5.5e-17 91.7 107 47.7
Psat3g158120 Pisum sativum HOM05D005846 ORTHO05D007369 5.5e-17 91.7 107 47.7
TPR.G39153 Trifolium pratense HOM05D005846 ORTHO05D007369 5.5e-17 91.7 107 47.7
Zm00001eb367060 Zea mays HOM05D005846 ORTHO05D007369 5.5e-17 91.7 107 49.5
Atru.chr5.196 Acer truncatum HOM05D005846 ORTHO05D007369 7.1e-17 91.3 107 48.6
CDE02G2440 Ceratophyllum demersum HOM05D005846 ORTHO05D007369 7.1e-17 91.3 107 47.7
Migut.B01566 Erythranthe guttata HOM05D005846 ORTHO05D007369 7.1e-17 91.3 107 47.7
Oeu061505.1 Olea europaea HOM05D005846 ORTHO05D007369 7.1e-17 91.3 107 49.5
AUR62004139 Chenopodium quinoa HOM05D005846 ORTHO05D007369 1.2e-16 90.5 112 44.6
FAN06G3163 Fragaria x ananassa HOM05D005846 ORTHO05D007369 1.2e-16 90.5 107 46.7
Gohir.D11G145600 Gossypium hirsutum HOM05D005846 ORTHO05D007369 1.2e-16 90.5 107 46.7
MSTRG.28219 Avicennia marina HOM05D005846 ORTHO05D007369 1.6e-16 90.1 107 47.7
Thecc.01G387400 Theobroma cacao HOM05D005846 ORTHO05D007369 1.6e-16 90.1 107 46.7
MELO3C022237.2 Cucumis melo HOM05D005846 ORTHO05D007369 2.1e-16 89.7 111 47.7
FAN01G1706 Fragaria x ananassa HOM05D005846 ORTHO05D007369 2.1e-16 89.7 107 45.8
unitig_26.g8879 Utricularia gibba HOM05D005846 ORTHO05D007369 2.7e-16 89.4 107 48.6
Lsat_1_v5_gn_7_11161 Lactuca sativa HOM05D005846 ORTHO05D007369 3.5e-16 89.0 107 49.5
Rhsim02G0216700 Rhododendron simsii HOM05D005846 ORTHO05D007369 3.5e-16 89.0 107 45.8
vmacro13469 Vaccinium macrocarpon HOM05D005846 ORTHO05D007369 3.5e-16 89.0 107 44.9
FvH4_7g10470 Fragaria vesca HOM05D005846 ORTHO05D007369 4.6e-16 88.6 107 45.8
Actinidia22778 Actinidia chinensis HOM05D005846 ORTHO05D007369 6.1e-16 88.2 107 45.8
Actinidia22833 Actinidia chinensis HOM05D005846 ORTHO05D007369 6.1e-16 88.2 107 45.8
Gohir.A11G139400 Gossypium hirsutum HOM05D005846 ORTHO05D007369 6.1e-16 88.2 107 45.8
THA.LOC104802481 Tarenaya hassleriana HOM05D005846 ORTHO05D007369 6.1e-16 88.2 107 46.7
Aa31LG1G26590 Aethionema arabicum HOM05D005846 ORTHO05D007369 1.0e-15 87.4 107 46.7
CSS0006984 Camellia sinensis var. sinensis HOM05D005846 ORTHO05D007369 1.0e-15 87.4 109 45.9
CSS0013945 Camellia sinensis var. sinensis HOM05D005846 ORTHO05D007369 1.0e-15 87.4 109 45.9
Ca_26287_v3 Cicer arietinum L. HOM05D005846 ORTHO05D007369 1.3e-15 87.0 107 45.8
EL10Ac1g00809 Beta vulgaris HOM05D005846 ORTHO05D007369 2.3e-15 86.3 107 45.8
CDE04G1707 Ceratophyllum demersum HOM05D005846 ORTHO05D007369 2.3e-15 86.3 107 44.9
Sp4g27070 Schrenkiella parvula HOM05D005846 ORTHO05D007369 2.3e-15 86.3 107 43.9
Lalb_Chr19g0126671 Lupinus albus HOM05D005846 ORTHO05D007369 3.0e-15 85.9 107 44.9
AL4G44100 Arabidopsis lyrata HOM05D005846 ORTHO05D007369 3.9e-15 85.5 107 43.9
AT2G45000 Arabidopsis thaliana HOM05D005846 ORTHO05D007369 3.9e-15 85.5 107 43.9
A05p05100 Brassica napus HOM05D005846 ORTHO05D007369 3.9e-15 85.5 107 43.9
BraA05t19484Z Brassica rapa HOM05D005846 ORTHO05D007369 3.9e-15 85.5 107 43.9
Carub.0004s2760 Capsella rubella HOM05D005846 ORTHO05D007369 3.9e-15 85.5 107 43.9
CARHR140260 Cardamine hirsuta HOM05D005846 ORTHO05D007369 5.1e-15 85.1 107 43.9
Thhalv10001339m.g Eutrema salsugineum HOM05D005846 ORTHO05D007369 6.7e-15 84.7 107 43.0
Pp3c15_14630 Physcomitrium patens HOM05D005846 ORTHO05D007369 1.9e-14 83.2 107 43.9
BcaC02g12270 Brassica carinata HOM05D005846 ORTHO05D007369 2.5e-14 82.8 107 43.0
C04p05950 Brassica napus HOM05D005846 ORTHO05D007369 2.2e-13 79.7 107 42.1
BolC4t22226H Brassica oleracea HOM05D005846 ORTHO05D007369 2.2e-13 79.7 107 42.1
Sc02g0002920 Simmondsia chinensis HOM05D005846 ORTHO05D007369 4.8e-13 78.6 67 62.7
Mapoly0005s0221 Marchantia polymorpha HOM05D005846 ORTHO05D007369 9.0e-12 74.3 107 38.3
PGR004G1857 Punica granatum HOM05D005846 ORTHO05D007369 9.0e-12 74.3 64 60.9
AagrBONN_evm.TU.Sc2ySwM_117.1077 Anthoceros agrestis HOM05D005846 ORTHO05D007369 1.2e-11 73.9 109 38.5
Os01g0856600 Oryza sativa ssp. japonica HOM05D005846 ORTHO05D007369 1.2e-11 73.9 94 44.7
CBR_g21126 Chara braunii HOM05D005846 ORTHO05D007369 2.2e-10 69.7 107 40.2
arahy.Tifrunner.gnm1.ann1.2XVX2B Arachis hypogaea HOM05D005846 ORTHO05D007369 8.5e-10 67.8 107 41.1
Cpa.g.sc22.4 Carica papaya HOM05D005846 ORTHO05D007369 5.7e-06 55.1 72 43.1


User provided reference genes

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