Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 2.0e-189 665.6 337 100.0
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 2.6e-104 382.9 246 82.5
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 1.4e-73 280.8 317 50.2
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 9.9e-72 274.6 338 49.1
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 9.3e-70 268.1 323 47.1
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 2.1e-69 266.9 319 46.4
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 8.7e-68 261.5 321 45.2
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 7.4e-67 258.5 326 46.9
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 2.4e-65 253.4 322 45.0
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 2.4e-65 253.4 324 45.7
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 1.2e-64 251.1 324 46.6
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 1.2e-64 251.1 326 44.8
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 1.3e-63 247.7 336 42.0
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 1.4e-62 244.2 325 42.8
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 1.0e-60 238.0 329 43.5
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 2.3e-60 236.9 335 43.3
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 5.1e-60 235.7 320 43.1
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 3.3e-59 233.0 322 42.2
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 9.6e-59 231.5 334 42.5
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 1.3e-58 231.1 299 44.1
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 3.7e-58 229.6 322 43.2
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 3.7e-58 229.6 335 42.1
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 3.7e-58 229.6 331 41.4
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 1.8e-57 227.3 333 39.9
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 2.4e-57 226.9 334 41.3
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 2.4e-57 226.9 322 42.2
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 4.0e-57 226.1 346 39.9
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 9.0e-57 224.9 322 40.7
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 1.2e-56 224.6 320 40.9
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 1.5e-56 224.2 334 41.0
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 2.0e-56 223.8 323 41.5
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 3.4e-56 223.0 327 40.4
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 3.4e-56 223.0 323 41.5
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 4.5e-56 222.6 335 40.3
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 1.7e-55 220.7 324 39.2
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 1.7e-55 220.7 306 43.8
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 2.2e-55 220.3 324 40.1
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 3.8e-55 219.5 336 42.0
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 6.5e-55 218.8 357 38.1
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 6.5e-55 218.8 324 39.5
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 6.5e-55 218.8 327 41.0
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 8.4e-55 218.4 324 39.5
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 1.1e-54 218.0 323 39.0
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 1.4e-54 217.6 325 41.5
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 2.5e-54 216.9 322 39.4
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 2.5e-54 216.9 326 42.3
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 2.5e-54 216.9 323 40.6
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 5.5e-54 215.7 322 38.8
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 7.1e-54 215.3 327 39.8
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 9.3e-54 214.9 328 40.5
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 1.2e-53 214.5 335 42.4
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 1.2e-53 214.5 334 39.2
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 1.6e-53 214.2 325 39.1
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 4.6e-53 212.6 326 43.9
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 4.6e-53 212.6 334 41.9
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 4.6e-53 212.6 342 40.6
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 6.0e-53 212.2 333 40.5
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 1.0e-52 211.5 329 38.3
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 2.3e-52 210.3 325 41.2
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 3.0e-52 209.9 330 41.5
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 3.9e-52 209.5 326 40.8
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 3.9e-52 209.5 323 41.5
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 3.9e-52 209.5 323 41.5
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 8.7e-52 208.4 323 41.2
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 1.1e-51 208.0 324 39.2
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 1.1e-51 208.0 320 42.8
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 3.3e-51 206.5 318 41.5
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 7.4e-51 205.3 320 41.9
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 7.4e-51 205.3 323 39.6
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 9.6e-51 204.9 321 41.4
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 9.6e-51 204.9 330 38.8
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 1.3e-50 204.5 318 41.5
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 1.6e-50 204.1 321 42.4
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 4.8e-50 202.6 316 41.1
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 4.8e-50 202.6 344 37.2
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 8.2e-50 201.8 332 40.4
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 1.4e-49 201.1 336 37.8
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 1.8e-49 200.7 322 41.3
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.8e-49 200.7 323 41.5
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 4.1e-49 199.5 318 40.6
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 4.1e-49 199.5 317 40.4
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 4.1e-49 199.5 316 39.9
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 4.1e-49 199.5 305 39.7
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 4.1e-49 199.5 345 39.1
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 6.9e-49 198.7 296 40.5
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 6.9e-49 198.7 299 39.1
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 1.2e-48 198.0 330 40.0
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 2.6e-48 196.8 274 40.1
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 5.0e-47 192.6 343 38.5
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 8.4e-47 191.8 318 39.9
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 1.4e-46 191.0 324 40.1
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 3.1e-41 173.3 275 38.2
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 6.9e-41 172.2 330 36.4
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.3e-39 167.9 327 37.6
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 2.1e-37 160.6 326 35.0
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 2.2e-34 150.6 325 34.2
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 2.9e-31 140.2 323 33.4
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 1.4e-28 131.3 158 44.9
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 1.5e-27 127.9 190 40.0
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 2.6e-24 117.1 158 40.5
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 5.9e-24 115.9 234 36.8
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 2.0e-19 100.9 160 33.8
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 2.0e-19 100.9 160 33.8
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 1.3e-18 98.2 132 42.4
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 2.4e-17 94.0 139 41.7
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 2.2e-15 87.4 87 56.3
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 1.2e-11 75.1 346 26.9
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 7.0e-09 65.9 83 41.0
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 2.7e-08 63.9 133 33.8
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 2.9e-07 60.5 56 50.0
SMO117G0244 Selaginella moellendorffii HOM05D006143 ORTHO05D007587 5.0e-07 59.7 77 42.9
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 8.5e-07 58.9 341 24.6
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 1.1e-06 58.5 158 28.5


User provided reference genes

Program Settings