Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.4e-60 236.1 121 100.0
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 1.7e-18 96.3 121 44.6
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 1.7e-18 96.3 112 43.8
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 5.6e-17 91.3 111 42.3
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 8.1e-16 87.4 121 39.7
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 8.1e-16 87.4 123 39.8
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 1.8e-15 86.3 117 43.6
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 1.8e-15 86.3 122 37.7
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 2.3e-15 85.9 121 38.0
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 4.0e-15 85.1 121 38.8
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 6.8e-15 84.3 112 41.1
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 8.9e-15 84.0 123 38.2
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 8.9e-15 84.0 94 47.9
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 8.9e-15 84.0 122 39.3
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 1.5e-14 83.2 116 42.2
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 2.0e-14 82.8 122 41.0
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.6e-14 82.4 120 35.8
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 2.6e-14 82.4 116 41.4
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 3.4e-14 82.0 124 37.9
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 4.4e-14 81.6 120 39.2
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 7.5e-14 80.9 115 41.7
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 7.5e-14 80.9 121 37.2
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 7.5e-14 80.9 116 41.4
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 9.8e-14 80.5 115 41.7
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 9.8e-14 80.5 120 40.0
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 1.3e-13 80.1 117 40.2
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.7e-13 79.7 118 35.6
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 2.2e-13 79.3 122 37.7
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 2.2e-13 79.3 122 36.1
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 2.2e-13 79.3 121 34.7
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 6.4e-13 77.8 116 38.8
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.4e-12 76.6 119 34.5
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 2.4e-12 75.9 123 35.8
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 2.4e-12 75.9 122 36.9
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 2.4e-12 75.9 122 36.9
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 2.4e-12 75.9 116 35.3
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 3.2e-12 75.5 119 33.6
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 5.4e-12 74.7 97 43.3
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 5.4e-12 74.7 123 36.6
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 5.4e-12 74.7 120 36.7
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 7.1e-12 74.3 115 38.3
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 7.1e-12 74.3 123 36.6
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 1.2e-11 73.6 113 37.2
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 1.2e-11 73.6 117 35.9
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 1.2e-11 73.6 122 36.1
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 1.6e-11 73.2 115 38.3
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.1e-11 72.8 120 33.3
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 2.1e-11 72.8 115 38.3
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 2.1e-11 72.8 123 35.8
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 3.5e-11 72.0 120 35.8
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 3.5e-11 72.0 131 34.4
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 3.5e-11 72.0 118 34.7
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 3.5e-11 72.0 122 32.8
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 3.5e-11 72.0 117 36.8
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 4.6e-11 71.6 122 35.2
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 1.0e-10 70.5 114 34.2
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 1.0e-10 70.5 124 34.7
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 1.0e-10 70.5 116 37.1
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 1.3e-10 70.1 125 34.4
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 1.7e-10 69.7 96 40.6
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 1.7e-10 69.7 116 37.1
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 1.7e-10 69.7 116 37.1
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 2.3e-10 69.3 116 34.5
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 3.9e-10 68.6 98 36.7
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 3.9e-10 68.6 116 34.5
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 5.1e-10 68.2 121 36.4
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 5.1e-10 68.2 112 33.0
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 6.6e-10 67.8 122 35.2
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 1.1e-09 67.0 122 35.2
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 1.1e-09 67.0 111 36.0
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 1.5e-09 66.6 120 33.3
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 1.5e-09 66.6 121 33.9
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 1.5e-09 66.6 121 33.9
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 1.5e-09 66.6 121 33.9
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 1.5e-09 66.6 121 33.9
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 1.5e-09 66.6 121 33.9
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.9e-09 66.2 98 38.8
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 5.6e-09 64.7 120 32.5
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 7.3e-09 64.3 122 33.6
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 7.3e-09 64.3 114 34.2
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 9.5e-09 63.9 95 37.9
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 3.6e-08 62.0 111 35.1
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 6.2e-08 61.2 94 38.3
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 1.1e-07 60.5 111 33.3
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 1.1e-07 60.5 98 33.7
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 1.1e-07 60.5 106 38.7
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 1.4e-07 60.1 96 36.5
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 1.2e-06 57.0 61 44.3
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 4.4e-06 55.1 71 35.2


User provided reference genes

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