Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000274 Vanilla planifolia HOM05D005236 ORTHO05D006557 5.2e-265 917.1 458 100.0
Dinv14429 Davidia involucrata HOM05D005236 ORTHO05D006557 1.8e-84 317.4 469 40.5
CSS0043470 Camellia sinensis var. sinensis HOM05D005236 ORTHO05D006557 3.1e-84 316.6 462 43.3
MBI10_g08556_MAGBIO Magnolia biondii HOM05D005236 ORTHO05D006557 1.5e-83 314.3 467 43.0
TAR622G0787 Trochodendron aralioides HOM05D005236 ORTHO05D006557 2.2e-82 310.5 449 43.0
Cc11_g08660 Coffea canephora HOM05D005236 ORTHO05D006557 1.9e-81 307.4 452 43.8
GSVIVG01011753001 Vitis vinifera HOM05D005236 ORTHO05D006557 3.2e-81 306.6 458 42.8
Aqoxy3G00124 Aquilegia oxysepala HOM05D005236 ORTHO05D006557 3.3e-78 296.6 446 41.3
FvH4_4g32470 Fragaria vesca HOM05D005236 ORTHO05D006557 1.8e-76 290.8 466 41.2
Manes.15G127900 Manihot esculenta HOM05D005236 ORTHO05D006557 5.3e-76 289.3 477 39.6
Thecc.02G282100 Theobroma cacao HOM05D005236 ORTHO05D006557 5.3e-76 289.3 479 39.7
Actinidia13577 Actinidia chinensis HOM05D005236 ORTHO05D006557 6.9e-76 288.9 370 44.6
ATR0598G134 Amborella trichopoda HOM05D005236 ORTHO05D006557 9.0e-76 288.5 482 38.8
FAN17G1995 Fragaria x ananassa HOM05D005236 ORTHO05D006557 9.0e-76 288.5 466 41.0
FAN22G1445 Fragaria x ananassa HOM05D005236 ORTHO05D006557 1.2e-75 288.1 466 41.0
RcHm_v2.0_Chr4g0441331 Rosa chinensis HOM05D005236 ORTHO05D006557 2.6e-75 287.0 464 40.9
MD13G1025100 Malus domestica HOM05D005236 ORTHO05D006557 3.4e-75 286.6 465 41.9
CARHR143960 Cardamine hirsuta HOM05D005236 ORTHO05D006557 4.5e-75 286.2 440 40.7
Carub.0005s0040 Capsella rubella HOM05D005236 ORTHO05D006557 7.6e-75 285.4 443 39.7
MD16G1027600 Malus domestica HOM05D005236 ORTHO05D006557 1.0e-74 285.0 455 40.2
CANSAT64G0788 Cannabis sativa HOM05D005236 ORTHO05D006557 1.3e-74 284.6 446 41.0
AL5G10420 Arabidopsis lyrata HOM05D005236 ORTHO05D006557 3.2e-73 280.0 440 40.5
AT2G01440 Arabidopsis thaliana HOM05D005236 ORTHO05D006557 5.5e-73 279.3 443 39.3
FAN07G1852 Fragaria x ananassa HOM05D005236 ORTHO05D006557 1.2e-72 278.1 406 42.6
MSTRG.7621 Avicennia marina HOM05D005236 ORTHO05D006557 7.9e-72 275.4 459 39.4
Gohir.A03G121000 Gossypium hirsutum HOM05D005236 ORTHO05D006557 1.0e-71 275.0 485 38.6
Gohir.D02G144400 Gossypium hirsutum HOM05D005236 ORTHO05D006557 1.0e-71 275.0 476 39.1
Gorai.005G161600 Gossypium raimondii HOM05D005236 ORTHO05D006557 1.0e-71 275.0 487 38.4
Prupe.1G325100 Prunus persica HOM05D005236 ORTHO05D006557 1.0e-71 275.0 465 39.8
Aa31LG2G8500 Aethionema arabicum HOM05D005236 ORTHO05D006557 1.3e-71 274.6 460 37.6
Ciclev10017747m.g Citrus clementina HOM05D005236 ORTHO05D006557 3.9e-71 273.1 393 41.2
TWI79G0143 Tripterygium wilfordii HOM05D005236 ORTHO05D006557 2.5e-70 270.4 449 40.3
Zm00001eb252400 Zea mays HOM05D005236 ORTHO05D006557 5.7e-70 269.2 447 39.4
Nitab4.5_0000742g0190 Nicotiana tabacum HOM05D005236 ORTHO05D006557 7.4e-70 268.9 463 38.2
FAN12G1300 Fragaria x ananassa HOM05D005236 ORTHO05D006557 9.7e-70 268.5 469 38.6
ECA246G1132 Erigeron canadensis HOM05D005236 ORTHO05D006557 2.8e-69 266.9 446 39.5
Migut.L00833 Erythranthe guttata HOM05D005236 ORTHO05D006557 3.7e-69 266.5 437 38.9
PSO017G4096 Papaver somniferum HOM05D005236 ORTHO05D006557 4.8e-69 266.2 435 40.0
SGA_v2.0_scaffold50G18498 Striga asiatica HOM05D005236 ORTHO05D006557 4.8e-69 266.2 433 39.3
Migut.L00644 Erythranthe guttata HOM05D005236 ORTHO05D006557 6.3e-69 265.8 437 38.7
Lalb_Chr10g0096161 Lupinus albus HOM05D005236 ORTHO05D006557 8.2e-69 265.4 470 37.4
Potri.010G112500 Populus trichocarpa HOM05D005236 ORTHO05D006557 1.1e-68 265.0 485 37.7
HanXRQChr15g0484551 Helianthus annuus HOM05D005236 ORTHO05D006557 1.4e-68 264.6 395 40.8
TPR.G36938 Trifolium pratense HOM05D005236 ORTHO05D006557 1.4e-68 264.6 472 37.1
CiPaw.05G250200 Carya illinoinensis HOM05D005236 ORTHO05D006557 2.4e-68 263.8 394 41.4
BolC7t43733H Brassica oleracea HOM05D005236 ORTHO05D006557 3.1e-68 263.5 416 38.9
Sopen05g003880 Solanum pennellii HOM05D005236 ORTHO05D006557 3.1e-68 263.5 466 37.3
Lsat_1_v5_gn_3_54941 Lactuca sativa HOM05D005236 ORTHO05D006557 4.1e-68 263.1 404 41.8
C07p31870 Brassica napus HOM05D005236 ORTHO05D006557 6.9e-68 262.3 415 38.6
Duzib251G0654 Durio zibethinus HOM05D005236 ORTHO05D006557 6.9e-68 262.3 429 38.0
Sed0013091 Sechium edule HOM05D005236 ORTHO05D006557 6.9e-68 262.3 419 39.1
Eucgr.G02185 Eucalyptus grandis HOM05D005236 ORTHO05D006557 1.2e-67 261.5 370 43.5
Lj2g0001419 Lotus japonicus HOM05D005236 ORTHO05D006557 1.3e-66 258.1 371 39.9
Sc14g0007110 Simmondsia chinensis HOM05D005236 ORTHO05D006557 5.0e-66 256.1 423 39.2
CsaV3_5G013670 Cucumis sativus L. HOM05D005236 ORTHO05D006557 8.5e-66 255.4 416 39.7
Phvul.003G032801 Phaseolus vulgaris HOM05D005236 ORTHO05D006557 2.5e-65 253.8 368 41.0
BraA06t27318Z Brassica rapa HOM05D005236 ORTHO05D006557 1.2e-64 251.5 419 37.9
CAN.G1298.25 Capsicum annuum HOM05D005236 ORTHO05D006557 2.1e-64 250.8 456 36.0
A06p44440 Brassica napus HOM05D005236 ORTHO05D006557 2.7e-64 250.4 418 38.0
AUR62038508 Chenopodium quinoa HOM05D005236 ORTHO05D006557 3.6e-64 250.0 397 39.0
Atru.chr11.574_Atru.chr11.575 Acer truncatum HOM05D005236 ORTHO05D006557 4.6e-64 249.6 401 40.1
Sp2g12880 Schrenkiella parvula HOM05D005236 ORTHO05D006557 1.0e-63 248.4 443 38.1
SalBow8G3693 Salvia bowleyana HOM05D005236 ORTHO05D006557 1.4e-63 248.1 451 36.4
SalBow8G4798 Salvia bowleyana HOM05D005236 ORTHO05D006557 1.4e-63 248.1 451 36.4
MELO3C018322.2 Cucumis melo HOM05D005236 ORTHO05D006557 2.3e-63 247.3 424 39.6
Thhalv10000760m.g Eutrema salsugineum HOM05D005236 ORTHO05D006557 3.9e-63 246.5 445 36.2
Ah.03g137280 Amaranthus hybridus HOM05D005236 ORTHO05D006557 9.7e-62 241.9 355 41.4
Psat6g043400 Pisum sativum HOM05D005236 ORTHO05D006557 8.2e-61 238.8 375 39.7
Medtr1g031140 Medicago truncatula HOM05D005236 ORTHO05D006557 1.1e-60 238.4 441 36.5
arahy.Tifrunner.gnm1.ann1.X3V98R Arachis hypogaea HOM05D005236 ORTHO05D006557 2.4e-60 237.3 485 34.0
DCAR_007297 Daucus carota HOM05D005236 ORTHO05D006557 1.2e-59 235.0 493 34.7
arahy.Tifrunner.gnm1.ann1.KH05JX Arachis hypogaea HOM05D005236 ORTHO05D006557 7.9e-56 222.2 446 33.0
Lj3C872G3 Lonicera japonica HOM05D005236 ORTHO05D006557 6.3e-53 212.6 467 33.2
EL10Ac6g14212 Beta vulgaris HOM05D005236 ORTHO05D006557 4.1e-52 209.9 484 31.8
BcaC06g34177 Brassica carinata HOM05D005236 ORTHO05D006557 1.9e-49 201.1 413 33.4
AUR62014142 Chenopodium quinoa HOM05D005236 ORTHO05D006557 3.1e-44 183.7 347 36.0
Pp3c19_21980 Physcomitrium patens HOM05D005236 ORTHO05D006557 1.0e-42 178.7 247 40.5
Rhsim09G0066900 Rhododendron simsii HOM05D005236 ORTHO05D006557 1.3e-34 151.8 171 48.0
Peaxi162Scf00159g00079 Petunia axillaris HOM05D005236 ORTHO05D006557 1.7e-34 151.4 175 46.9
Mapoly0024s0015 Marchantia polymorpha HOM05D005236 ORTHO05D006557 1.1e-33 148.7 287 31.4
SMO200G0115 Selaginella moellendorffii HOM05D005236 ORTHO05D006557 8.8e-31 139.0 288 30.6
AagrBONN_evm.TU.Sc2ySwM_368.2128 Anthoceros agrestis HOM05D005236 ORTHO05D006557 2.0e-30 137.9 270 32.2
Glyma.07G164900 Glycine max HOM05D005236 ORTHO05D006557 1.3e-26 125.2 234 35.0
Rhsim09G0066800 Rhododendron simsii HOM05D005236 ORTHO05D006557 8.6e-26 122.5 249 36.9
unitig_52.g17382 Utricularia gibba HOM05D005236 ORTHO05D006557 3.0e-23 114.0 119 47.9
Hma1.2p1_0096F.1_g047840 Hydrangea macrophylla HOM05D005236 ORTHO05D006557 5.7e-22 109.8 228 35.5
SEGI_25716 Sequoiadendron giganteum HOM05D005236 ORTHO05D006557 3.7e-21 107.1 178 37.1
Hund24974 Selenicereus undatus HOM05D005236 ORTHO05D006557 2.4e-20 104.4 260 30.4
BcaC06g31307 Brassica carinata HOM05D005236 ORTHO05D006557 3.1e-20 104.0 266 32.0
Oeu003384.3 Olea europaea HOM05D005236 ORTHO05D006557 1.5e-17 95.1 86 52.3
Medtr3g079915 Medicago truncatula HOM05D005236 ORTHO05D006557 4.3e-17 93.6 84 56.0
Nn4g24162 Nelumbo nucifera HOM05D005236 ORTHO05D006557 4.3e-17 93.6 89 50.6
Haze_11000 Corylus avellana HOM05D005236 ORTHO05D006557 1.4e-15 88.6 103 45.6
Peaxi162Scf00159g00077 Petunia axillaris HOM05D005236 ORTHO05D006557 6.6e-10 69.7 251 25.9
ClCG07G006500 Citrullus lanatus HOM05D005236 ORTHO05D006557 4.3e-09 67.0 250 26.4


User provided reference genes

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