Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G109600 Glycine max HOM05D000216 ORTHO05D004083 1.1e-28 129.4 72 100.0
LjContig00318g0027021 Lotus japonicus HOM05D000216 ORTHO05D004083 6.9e-23 110.2 72 87.5
LjContig00489g0003457 Lotus japonicus HOM05D000216 ORTHO05D004083 1.2e-22 109.4 72 86.1
MD15G1134000 Malus domestica HOM05D000216 ORTHO05D004083 2.5e-20 101.7 82 74.4
CAN.G1167.13 Capsicum annuum HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
CAN.G1167.14 Capsicum annuum HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
CAN.G939.11 Capsicum annuum HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
AUR62012106 Chenopodium quinoa HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
COL.COLO4_00534 Corchorus olitorius HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
MELO3C028037.2 Cucumis melo HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
MELO3C034728.2 Cucumis melo HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
DCAR_032471 Daucus carota HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
Migut.D01336 Erythranthe guttata HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
HanXRQChr00c0601g0576501 Helianthus annuus HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
HanXRQChr08g0210211 Helianthus annuus HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
HanXRQChr11g0326641 Helianthus annuus HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
HanXRQChr13g0415491 Helianthus annuus HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
HanXRQCPg0579831 Helianthus annuus HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
Hma1.2p1_0414F.1_g147695 Hydrangea macrophylla HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
Lalb_Chr00c31g0408381 Lupinus albus HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
Lalb_Chr08g0232631 Lupinus albus HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
Oeu015531.1 Olea europaea HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
Oeu037367.1 Olea europaea HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
PSO548G0075 Papaver somniferum HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
Peaxi162Scf00081g00173 Petunia axillaris HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
Peaxi162Scf00379g00086 Petunia axillaris HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
Potri.013G138490 Populus trichocarpa HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
PGR111G0043 Punica granatum HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
RcHm_v2.0_CPg0502441 Rosa chinensis HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
SabraPtG0000900 Salix brachista HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
Sed0011722 Sechium edule HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
Sed0017572 Sechium edule HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
Sed0017719 Sechium edule HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
TWI34G0859 Tripterygium wilfordii HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
unitig_91.g26493 Utricularia gibba HOM05D000216 ORTHO05D004083 3.2e-20 101.3 82 75.6
Aa31csc39G180 Aethionema arabicum HOM05D000216 ORTHO05D004083 4.2e-20 100.9 82 74.4
AL2G20960 Arabidopsis lyrata HOM05D000216 ORTHO05D004083 4.2e-20 100.9 82 74.4
ATCG00140 Arabidopsis thaliana HOM05D000216 ORTHO05D004083 4.2e-20 100.9 82 74.4
BcaC05g28803 Brassica carinata HOM05D000216 ORTHO05D004083 4.2e-20 100.9 82 74.4
BNapus_Darmor_BZH_scaffold_253p00030 Brassica napus HOM05D000216 ORTHO05D004083 4.2e-20 100.9 82 74.4
BolC2t10573H Brassica oleracea HOM05D000216 ORTHO05D004083 4.2e-20 100.9 82 74.4
BolSC29t60570H Brassica oleracea HOM05D000216 ORTHO05D004083 4.2e-20 100.9 82 74.4
BolSC37t60771H Brassica oleracea HOM05D000216 ORTHO05D004083 4.2e-20 100.9 82 74.4
BolSC44t60845H Brassica oleracea HOM05D000216 ORTHO05D004083 4.2e-20 100.9 82 74.4
BolSC45t60879H Brassica oleracea HOM05D000216 ORTHO05D004083 4.2e-20 100.9 82 74.4
BolSC46t60984H Brassica oleracea HOM05D000216 ORTHO05D004083 4.2e-20 100.9 82 74.4
BraSC143t45678Z Brassica rapa HOM05D000216 ORTHO05D004083 4.2e-20 100.9 82 74.4
BraSC151t45692Z Brassica rapa HOM05D000216 ORTHO05D004083 4.2e-20 100.9 82 74.4
CARHR281890 Cardamine hirsuta HOM05D000216 ORTHO05D004083 4.2e-20 100.9 82 74.4
Gohir.A01G140039 Gossypium hirsutum HOM05D000216 ORTHO05D004083 4.2e-20 100.9 82 74.4
Potri.019G028500 Populus trichocarpa HOM05D000216 ORTHO05D004083 4.2e-20 100.9 82 75.6
Hund19315 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund23974 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund27453 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund27641 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund27671 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund27698 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund27743 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund27765 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund27806 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund27823 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund27839 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund27930 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund27945 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28017 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28059 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28084 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28124 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28130 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28141 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28162 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28188 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28209 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28236 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28259 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.2e-20 100.9 82 74.4
Hund28352 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28373 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28399 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28414 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28501 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28687 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28703 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28807 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28825 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28834 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28905 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund28985 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund29114 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund29198 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund29479 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund29776 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-20 100.9 82 74.4
Hund31369 Selenicereus undatus HOM05D000216 ORTHO05D004083 4.2e-20 100.9 82 74.4
Hund31430 Selenicereus undatus HOM05D000216 ORTHO05D004083 4.2e-20 100.9 82 74.4
AUR62043346 Chenopodium quinoa HOM05D000216 ORTHO05D004083 7.1e-20 100.1 82 74.4
CAN.G612.4 Capsicum annuum HOM05D000216 ORTHO05D004083 9.3e-20 99.8 82 74.4
CAN.G877.3 Capsicum annuum HOM05D000216 ORTHO05D004083 9.3e-20 99.8 82 73.2
Sed0023443 Sechium edule HOM05D000216 ORTHO05D004083 9.3e-20 99.8 82 74.4
Psat0s2754g0040 Pisum sativum HOM05D000216 ORTHO05D004083 1.6e-19 99.0 82 74.4
Psat1g099200 Pisum sativum HOM05D000216 ORTHO05D004083 2.1e-19 98.6 82 74.4
Psat7g033720 Pisum sativum HOM05D000216 ORTHO05D004083 2.1e-19 98.6 82 74.4
Lalb_Chr09g0335331 Lupinus albus HOM05D000216 ORTHO05D004083 2.7e-19 98.2 82 73.2
Lalb_Chr00c45g0412721 Lupinus albus HOM05D000216 ORTHO05D004083 3.5e-19 97.8 82 73.2
Sed0022034 Sechium edule HOM05D000216 ORTHO05D003638 3.5e-19 97.8 81 72.8
Cpa.g.sc10.246 Carica papaya HOM05D000216 ORTHO05D004083 4.6e-19 97.4 82 73.2
Atru.chr6.501 Acer truncatum HOM05D000216 ORTHO05D004083 6.1e-19 97.1 82 73.2
Psat5g134720 Pisum sativum HOM05D000216 ORTHO05D004083 6.1e-19 97.1 82 73.2
Medtr4g051097 Medicago truncatula HOM05D000216 ORTHO05D004083 7.9e-19 96.7 82 73.2
Nitab4.5_0000619g0110 Nicotiana tabacum HOM05D000216 ORTHO05D004083 1.3e-18 95.9 82 70.7
Gorai.002G196100 Gossypium raimondii HOM05D000216 ORTHO05D004083 1.8e-18 95.5 82 74.4
Solyc10g044550.1 Solanum lycopersicum HOM05D000216 ORTHO05D004083 1.8e-18 95.5 82 72.0
CSS0029618 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D004083 3.0e-18 94.7 72 77.8
Gohir.D08G103700 Gossypium hirsutum HOM05D000216 ORTHO05D004083 5.1e-18 94.0 82 70.7
Psat0s5083g0040 Pisum sativum HOM05D000216 ORTHO05D004083 6.7e-18 93.6 82 70.7
Solyc09g059660.1 Solanum lycopersicum HOM05D000216 ORTHO05D004083 1.1e-17 92.8 79 72.2
BolC6t36193H Brassica oleracea HOM05D000216 ORTHO05D004083 1.9e-17 92.0 82 68.3
Gorai.004G111200 Gossypium raimondii HOM05D000216 ORTHO05D004083 2.5e-17 91.7 82 67.1
Nitab4.5_0009256g0010 Nicotiana tabacum HOM05D000216 ORTHO05D004083 2.5e-17 91.7 82 69.5
Gohir.D01G158000 Gossypium hirsutum HOM05D000216 ORTHO05D004083 5.7e-17 90.5 82 74.4
Glyma.06G229000 Glycine max HOM05D000216 ORTHO05D004083 9.7e-17 89.7 82 68.3
SMO086G0011 Selaginella moellendorffii HOM05D000216 ORTHO05D004083 1.3e-16 89.4 82 68.3
Gohir.D10G206400 Gossypium hirsutum HOM05D000216 ORTHO05D004083 1.6e-16 89.0 82 65.9
Solyc08g028860.1 Solanum lycopersicum HOM05D000216 ORTHO05D004083 1.6e-16 89.0 82 69.5
Gorai.011G232000 Gossypium raimondii HOM05D000216 ORTHO05D004083 2.8e-16 88.2 82 68.3
Gohir.D10G139200 Gossypium hirsutum HOM05D000216 ORTHO05D004083 4.8e-16 87.4 82 67.1
Migut.D01411 Erythranthe guttata HOM05D000216 ORTHO05D004083 6.3e-16 87.0 74 73.0
Sed0021232 Sechium edule HOM05D000216 ORTHO05D004083 6.3e-16 87.0 74 73.0
Gohir.D10G221700 Gossypium hirsutum HOM05D000216 ORTHO05D004083 1.8e-15 85.5 82 65.9
BcaC03g16701 Brassica carinata HOM05D000216 ORTHO05D004083 5.3e-15 84.0 75 68.0
Gorai.011G251200 Gossypium raimondii HOM05D000216 ORTHO05D004083 6.9e-15 83.6 82 64.6
Lsat_1_v5_gn_1_38660 Lactuca sativa HOM05D000216 ORTHO05D004083 1.2e-14 82.8 118 51.7
Phvul.005G066100 Phaseolus vulgaris HOM05D000216 ORTHO05D004083 1.5e-14 82.4 82 67.1
Gorai.011G172900 Gossypium raimondii HOM05D000216 ORTHO05D004083 2.0e-14 82.0 80 65.0
Lsat_1_v5_gn_4_83740 Lactuca sativa HOM05D000216 ORTHO05D004083 2.0e-14 82.0 74 67.6
Manes.05G065650 Manihot esculenta HOM05D000216 ORTHO05D004083 4.5e-14 80.9 69 71.0
Peaxi162Scf00211g00234 Petunia axillaris HOM05D000216 ORTHO05D004083 7.7e-14 80.1 108 55.6
Gohir.A13G095800 Gossypium hirsutum HOM05D000216 ORTHO05D004083 2.2e-13 78.6 47 89.4
Gohir.D10G154900 Gossypium hirsutum HOM05D000216 ORTHO05D004083 2.9e-13 78.2 70 65.7
Psat0s2754g0200 Pisum sativum HOM05D000743 ORTHO05D000580 2.9e-13 78.2 74 66.2
Psat1g003840 Pisum sativum HOM05D000743 ORTHO05D000580 2.9e-13 78.2 74 66.2
Psat6g219360 Pisum sativum HOM05D000743 ORTHO05D000580 2.9e-13 78.2 74 66.2
Sopen08g009640 Solanum pennellii HOM05D000216 ORTHO05D004083 5.0e-13 77.4 66 71.2
Nn6g31741 Nelumbo nucifera HOM05D000216 ORTHO05D004083 8.5e-13 76.6 56 76.8
Gorai.011G099400 Gossypium raimondii HOM05D000216 ORTHO05D004083 1.4e-12 75.9 82 62.2
Lsat_1_v5_gn_3_17381 Lactuca sativa HOM05D000216 ORTHO05D004083 1.9e-12 75.5 82 62.2
Psat0s1586g0120 Pisum sativum HOM05D000216 ORTHO05D003638 1.9e-12 75.5 71 66.2
RcHm_v2.0_Chr4g0416071 Rosa chinensis HOM05D000216 ORTHO05D004083 5.5e-12 73.9 66 68.2
Sc12g0006390 Simmondsia chinensis HOM05D000216 ORTHO05D004083 5.5e-12 73.9 82 58.5
Lsat_1_v5_gn_6_85281 Lactuca sativa HOM05D000216 ORTHO05D004083 9.4e-12 73.2 81 56.8
ClCG10G016680 Citrullus lanatus HOM05D000216 ORTHO05D004083 1.2e-11 72.8 68 66.2
Solyc02g012025.1 Solanum lycopersicum HOM05D000216 ORTHO05D004083 2.1e-11 72.0 73 65.8
GSVIVG01021581001 Vitis vinifera HOM05D000216 ORTHO05D004083 2.3e-10 68.6 47 78.7
HanXRQChr11g0341981 Helianthus annuus HOM05D000216 ORTHO05D004083 3.0e-10 68.2 47 80.9
Sopen07g020340 Solanum pennellii HOM05D000216 ORTHO05D004083 5.1e-10 67.4 82 56.1
Gorai.011G251300 Gossypium raimondii HOM05D000216 ORTHO05D004083 6.7e-10 67.0 72 63.9
Solyc12g150104.1 Solanum lycopersicum HOM05D000216 ORTHO05D004083 6.7e-10 67.0 81 55.6
Psat0s2288g0080 Pisum sativum HOM05D000743 ORTHO05D000580 1.1e-09 66.2 74 59.5
Nn2g15008 Nelumbo nucifera HOM05D000216 ORTHO05D004083 1.5e-09 65.9 80 60.0
BraSC59t46516Z Brassica rapa HOM05D000216 ORTHO05D004083 1.3e-08 62.8 59 64.4
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 1.1e-07 59.7 67 61.2
MELO3C001566.2 Cucumis melo HOM05D000216 ORTHO05D004083 1.8e-07 58.9 54 66.7
BolSC29t60525H Brassica oleracea HOM05D000216 ORTHO05D004083 3.1e-07 58.2 40 77.5
Manes.09G038550 Manihot esculenta HOM05D000216 ORTHO05D004083 9.1e-07 56.6 77 51.9
MELO3C001387.2 Cucumis melo HOM05D000216 ORTHO05D004083 1.2e-06 56.2 52 65.4
MELO3C028124.2 Cucumis melo HOM05D000216 ORTHO05D004083 1.2e-06 56.2 52 65.4
Nn7g37777 Nelumbo nucifera HOM05D000216 ORTHO05D004083 1.2e-06 56.2 52 65.4
SEGI_08469 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 1.2e-06 56.2 54 63.0
AUR62037880 Chenopodium quinoa HOM05D000743 ORTHO05D000580 1.5e-06 55.8 51 66.7
SEGI_18094 Sequoiadendron giganteum HOM05D000890 ORTHO05D000697 1.5e-06 55.8 68 52.9
Psat0s2961g0120 Pisum sativum HOM05D000743 ORTHO05D000580 2.6e-06 55.1 54 63.0
VMungo0251G0893 Vigna mungo HOM05D000216 ORTHO05D004083 2.6e-06 55.1 52 63.5
CAN.G386.12 Capsicum annuum HOM05D000743 ORTHO05D004083 4.5e-06 54.3 51 64.7
Dinv39818 Davidia involucrata HOM05D000216 ORTHO05D004083 4.5e-06 54.3 51 64.7
ECA054G0006 Erigeron canadensis HOM05D000890 ORTHO05D000697 4.5e-06 54.3 51 64.7
ECA169G0008 Erigeron canadensis HOM05D000216 ORTHO05D000634 4.5e-06 54.3 51 64.7
Lj2A1236G71 Lonicera japonica HOM05D000743 ORTHO05D000580 4.5e-06 54.3 51 64.7
RhsimPtG0004600 Rhododendron simsii HOM05D000743 ORTHO05D000580 4.5e-06 54.3 51 64.7
SalBow1G2727 Salvia bowleyana HOM05D000743 ORTHO05D000580 4.5e-06 54.3 51 64.7
SEGI_27666 Sequoiadendron giganteum HOM05D000743 ORTHO05D004083 4.5e-06 54.3 51 60.8
SEGI_39320 Sequoiadendron giganteum HOM05D000743 ORTHO05D004083 4.5e-06 54.3 51 60.8
vmacro10576 Vaccinium macrocarpon HOM05D001250 ORTHO05D000627 4.5e-06 54.3 51 64.7
vmacro22404 Vaccinium macrocarpon HOM05D000743 ORTHO05D000580 4.5e-06 54.3 51 64.7
Ah.10g028530 Amaranthus hybridus HOM05D000743 ORTHO05D000580 5.9e-06 53.9 57 59.6
Hund04027 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.9e-06 53.9 51 62.7
Hund29339 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.9e-06 53.9 51 62.7
Hund30662 Selenicereus undatus HOM05D000216 ORTHO05D004083 5.9e-06 53.9 51 62.7
SEGI_07890 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 5.9e-06 53.9 54 61.1


User provided reference genes

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