Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G028233 Glycine max HOM05D005539 ORTHO05D006644 1.5e-167 592.8 303 100.0
Glyma.11G229000 Glycine max HOM05D005539 ORTHO05D006644 5.9e-140 501.1 271 93.4
Phvul.001G242300 Phaseolus vulgaris HOM05D005539 ORTHO05D006644 9.1e-133 477.2 271 89.3
VMungo1383G3500 Vigna mungo HOM05D005539 ORTHO05D006644 5.0e-131 471.5 271 87.8
Lj6g0015972 Lotus japonicus HOM05D005539 ORTHO05D006644 3.0e-128 462.2 271 86.7
Lalb_Chr15g0084151 Lupinus albus HOM05D005539 ORTHO05D006644 5.1e-128 461.5 271 85.6
TPR.G2533 Trifolium pratense HOM05D005539 ORTHO05D006644 7.4e-127 457.6 271 85.2
Medtr3g070390 Medicago truncatula HOM05D005539 ORTHO05D006644 3.7e-126 455.3 271 84.5
arahy.Tifrunner.gnm1.ann1.4ME2IF Arachis hypogaea HOM05D005539 ORTHO05D006644 5.3e-125 451.4 271 83.8
arahy.Tifrunner.gnm1.ann1.W7ADHZ Arachis hypogaea HOM05D005539 ORTHO05D006644 7.7e-124 447.6 271 83.0
Ca_15119_v3 Cicer arietinum L. HOM05D005539 ORTHO05D006644 2.6e-119 432.6 271 81.9
Psat5g128120 Pisum sativum HOM05D005539 ORTHO05D006644 4.8e-118 428.3 273 82.4
CiPaw.01G297900 Carya illinoinensis HOM05D005539 ORTHO05D006644 7.5e-103 377.9 280 68.2
Dinv17986 Davidia involucrata HOM05D005539 ORTHO05D006644 8.3e-102 374.4 276 69.2
Cfa001325 Carpinus fangiana HOM05D005539 ORTHO05D006644 4.1e-101 372.1 276 68.8
Atru.chr12.24 Acer truncatum HOM05D005539 ORTHO05D006644 7.7e-100 367.9 279 66.3
COL.COLO4_25704 Corchorus olitorius HOM05D005539 ORTHO05D006644 7.7e-100 367.9 276 69.2
Duzib106G1755 Durio zibethinus HOM05D005539 ORTHO05D006644 6.5e-99 364.8 276 68.5
Ciclev10030725m.g Citrus clementina HOM05D005539 ORTHO05D006644 1.1e-98 364.0 277 68.2
Thecc.10G020000 Theobroma cacao HOM05D005539 ORTHO05D006644 1.9e-98 363.2 279 67.7
GSVIVG01032835001 Vitis vinifera HOM05D005539 ORTHO05D006644 3.2e-98 362.5 280 67.5
TAR369G0030 Trochodendron aralioides HOM05D005539 ORTHO05D006644 1.2e-97 360.5 276 66.7
Gohir.A10G235300 Gossypium hirsutum HOM05D005539 ORTHO05D006644 3.6e-97 359.0 279 67.0
Hma1.2p1_0703F.1_g206530 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 1.0e-96 357.5 276 66.7
Hma1.2p1_0703F.1_g206540 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 1.0e-96 357.5 276 66.7
Gohir.D10G247700 Gossypium hirsutum HOM05D005539 ORTHO05D006644 1.8e-96 356.7 279 66.7
Manes.10G013600 Manihot esculenta HOM05D005539 ORTHO05D006644 6.8e-96 354.8 277 65.7
Gorai.011G286200 Gossypium raimondii HOM05D005539 ORTHO05D006644 1.5e-95 353.6 279 66.3
Cpa.g.sc19.181 Carica papaya HOM05D005539 ORTHO05D006644 4.4e-95 352.1 276 64.1
Haze_17219 Corylus avellana HOM05D005539 ORTHO05D006644 5.7e-95 351.7 306 61.1
RcHm_v2.0_Chr1g0370081 Rosa chinensis HOM05D005539 ORTHO05D006644 6.3e-94 348.2 279 65.6
Prupe.2G249200 Prunus persica HOM05D005539 ORTHO05D006644 2.4e-93 346.3 258 67.1
Eucgr.J00217 Eucalyptus grandis HOM05D005539 ORTHO05D006644 4.1e-93 345.5 297 59.9
MD01G1152200 Malus domestica HOM05D005539 ORTHO05D006644 4.1e-93 345.5 260 65.8
Actinidia29697 Actinidia chinensis HOM05D005539 ORTHO05D006644 2.7e-92 342.8 277 64.6
Potri.008G067600 Populus trichocarpa HOM05D005539 ORTHO05D006644 2.7e-92 342.8 275 64.4
Potri.010G189700 Populus trichocarpa HOM05D005539 ORTHO05D006644 2.7e-92 342.8 275 65.1
FvH4_7g24380 Fragaria vesca HOM05D005539 ORTHO05D006644 4.5e-92 342.0 279 65.2
FAN06G2075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 4.5e-92 342.0 279 65.2
FAN06G4384 Fragaria x ananassa HOM05D005539 ORTHO05D006644 4.5e-92 342.0 279 65.2
FAN06G5029 Fragaria x ananassa HOM05D005539 ORTHO05D006644 4.5e-92 342.0 279 65.2
FAN10G4325 Fragaria x ananassa HOM05D005539 ORTHO05D006644 4.5e-92 342.0 279 65.2
Nn2g13702 Nelumbo nucifera HOM05D005539 ORTHO05D006644 4.5e-92 342.0 280 63.2
Actinidia33928 Actinidia chinensis HOM05D005539 ORTHO05D006644 1.0e-91 340.9 272 65.1
FAN01G2659 Fragaria x ananassa HOM05D005539 ORTHO05D006644 1.0e-91 340.9 279 64.9
FAN10G0075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 6.6e-91 338.2 279 64.5
CSS0043358 Camellia sinensis var. sinensis HOM05D005539 ORTHO05D006644 3.3e-90 335.9 276 65.6
Dinv17988 Davidia involucrata HOM05D005539 ORTHO05D006644 5.6e-90 335.1 250 68.8
FAN03G1336 Fragaria x ananassa HOM05D005539 ORTHO05D006644 5.6e-90 335.1 279 64.2
Lj8A68G37 Lonicera japonica HOM05D005539 ORTHO05D006644 7.3e-90 334.7 277 62.1
Peaxi162Scf00825g00123 Petunia axillaris HOM05D005539 ORTHO05D006644 7.3e-90 334.7 275 63.6
PGR044G2440 Punica granatum HOM05D005539 ORTHO05D006644 3.6e-89 332.4 284 63.0
Lsat_1_v5_gn_2_122921 Lactuca sativa HOM05D005539 ORTHO05D006644 1.8e-88 330.1 272 64.3
THA.LOC104826852 Tarenaya hassleriana HOM05D005539 ORTHO05D006644 1.8e-88 330.1 259 63.3
CANSAT56G2522 Cannabis sativa HOM05D005539 ORTHO05D006644 3.0e-88 329.3 275 63.3
Sabra10G0146300 Salix brachista HOM05D005539 ORTHO05D006644 4.0e-88 328.9 297 58.9
ECA238G2434 Erigeron canadensis HOM05D005539 ORTHO05D006644 6.8e-88 328.2 276 63.4
EL10Ac2g04818 Beta vulgaris HOM05D005539 ORTHO05D006644 3.4e-87 325.9 280 62.1
Sc14g0005420 Simmondsia chinensis HOM05D005539 ORTHO05D006644 4.4e-87 325.5 278 61.5
CsaV3_5G010080 Cucumis sativus L. HOM05D005539 ORTHO05D006644 1.3e-86 323.9 281 59.4
AL6G15570 Arabidopsis lyrata HOM05D005539 ORTHO05D006644 6.4e-86 321.6 277 59.6
A10p30680 Brassica napus HOM05D005539 ORTHO05D006644 1.4e-85 320.5 277 58.1
BraA10t45109Z Brassica rapa HOM05D005539 ORTHO05D006644 1.4e-85 320.5 277 58.1
AUR62012239 Chenopodium quinoa HOM05D005539 ORTHO05D006644 1.4e-85 320.5 280 60.4
Hund15944 Selenicereus undatus HOM05D005539 ORTHO05D006644 2.4e-85 319.7 276 60.9
CAN.G1694.1 Capsicum annuum HOM05D005539 ORTHO05D006644 3.2e-85 319.3 276 61.2
Sopen11g010350 Solanum pennellii HOM05D005539 ORTHO05D006644 3.2e-85 319.3 276 60.5
ClCG07G004120 Citrullus lanatus HOM05D005539 ORTHO05D006644 7.0e-85 318.2 282 59.2
Solyc11g020190.1 Solanum lycopersicum HOM05D005539 ORTHO05D006644 7.0e-85 318.2 276 60.5
C09p71160 Brassica napus HOM05D005539 ORTHO05D006644 1.2e-84 317.4 277 57.8
BolC9t59878H Brassica oleracea HOM05D005539 ORTHO05D006644 1.2e-84 317.4 277 57.8
BcaC06g32275 Brassica carinata HOM05D005539 ORTHO05D006644 1.6e-84 317.0 277 58.8
MELO3C025184.2 Cucumis melo HOM05D005539 ORTHO05D006644 2.7e-84 316.2 262 59.9
Solyc11g008120.3 Solanum lycopersicum HOM05D005539 ORTHO05D006644 2.7e-84 316.2 276 60.5
Sc14g0005370 Simmondsia chinensis HOM05D005539 ORTHO05D006644 4.6e-84 315.5 278 60.1
AT5G05680 Arabidopsis thaliana HOM05D005539 ORTHO05D006644 5.9e-84 315.1 277 58.5
AUR62022871 Chenopodium quinoa HOM05D005539 ORTHO05D006644 1.0e-83 314.3 275 60.4
DCAR_011807 Daucus carota HOM05D005539 ORTHO05D006644 1.0e-83 314.3 252 64.7
HanXRQChr14g0459831 Helianthus annuus HOM05D005539 ORTHO05D006644 1.0e-83 314.3 277 61.7
MSTRG.8325 Avicennia marina HOM05D005539 ORTHO05D006644 1.3e-83 313.9 276 60.5
Cc02_g06620 Coffea canephora HOM05D005539 ORTHO05D006644 1.7e-83 313.5 276 58.7
PSO339G2908 Papaver somniferum HOM05D005539 ORTHO05D006644 1.7e-83 313.5 277 58.8
Carub.0006s0457 Capsella rubella HOM05D005539 ORTHO05D006644 2.3e-83 313.2 276 58.0
Rhsim09G0176800 Rhododendron simsii HOM05D005539 ORTHO05D006644 3.9e-83 312.4 276 61.6
Sed0009998 Sechium edule HOM05D005539 ORTHO05D006644 8.6e-83 311.2 282 58.5
Ah.04g164520 Amaranthus hybridus HOM05D005539 ORTHO05D006644 2.5e-82 309.7 276 59.1
Sp6g37210 Schrenkiella parvula HOM05D005539 ORTHO05D006644 2.5e-82 309.7 277 58.8
Oeu064386.1 Olea europaea HOM05D005539 ORTHO05D006644 5.6e-82 308.5 276 58.7
Aqoxy4G02586 Aquilegia oxysepala HOM05D005539 ORTHO05D006644 3.6e-81 305.8 276 58.0
Migut.F01380 Erythranthe guttata HOM05D005539 ORTHO05D006644 9.8e-79 297.7 254 60.2
Thhalv10012715m.g Eutrema salsugineum HOM05D005539 ORTHO05D006644 1.3e-78 297.4 277 54.9
CARHR207600 Cardamine hirsuta HOM05D005539 ORTHO05D006644 2.2e-78 296.6 277 56.7
vmacro10050 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 3.7e-78 295.8 278 57.9
PSO384G3240 Papaver somniferum HOM05D005539 ORTHO05D006644 1.4e-77 293.9 258 59.7
vmacro10051 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 3.5e-76 289.3 276 56.9
Aa31LG11G6690 Aethionema arabicum HOM05D005539 ORTHO05D006644 3.9e-75 285.8 276 54.7
BcaB05g21701 Brassica carinata HOM05D005539 ORTHO05D006644 5.6e-74 282.0 253 58.1
SGA_v2.0_scaffold76G25107 Striga asiatica HOM05D005539 ORTHO05D006644 4.0e-72 275.8 283 53.7
SHI03446 Sapria himalayana HOM05D005539 ORTHO05D006644 1.2e-68 264.2 234 56.8
CDE04G1676 Ceratophyllum demersum HOM05D005539 ORTHO05D006644 6.2e-65 251.9 280 48.6
ATR0193G007 Amborella trichopoda HOM05D005539 ORTHO05D006644 1.1e-61 241.1 255 49.8
unitig_0.g238 Utricularia gibba HOM05D005539 ORTHO05D006644 3.6e-57 226.1 276 49.3
HanXRQChr13g0392111 Helianthus annuus HOM05D005539 ORTHO05D006644 1.3e-54 217.6 192 63.0
Zm00001eb430560 Zea mays HOM05D005539 ORTHO05D006644 8.4e-54 214.9 311 41.5
HPP92_019887 Vanilla planifolia HOM05D005539 ORTHO05D006644 3.2e-53 213.0 269 44.2
SEGI_35888 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 4.6e-52 209.1 256 44.1
BcaC06g32273 Brassica carinata HOM05D005539 ORTHO05D006644 1.1e-50 204.5 280 44.3
Os04g0608400 Oryza sativa ssp. japonica HOM05D005539 ORTHO05D006644 7.3e-50 201.8 279 43.0
MD07G1220900 Malus domestica HOM05D005539 ORTHO05D006644 7.1e-45 185.3 160 58.8
Mapoly0043s0044 Marchantia polymorpha HOM05D005539 ORTHO05D006644 3.4e-39 166.4 251 39.4
Pp3c6_24520 Physcomitrium patens HOM05D005539 ORTHO05D006644 1.2e-36 157.9 254 36.6
AagrBONN_evm.TU.Sc2ySwM_362.2924 Anthoceros agrestis HOM05D005539 ORTHO05D006644 9.6e-34 148.3 254 36.6
vmacro22159 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 2.5e-26 123.6 227 38.8
Sabra08G0049700 Salix brachista HOM05D005539 ORTHO05D006644 2.2e-17 94.0 150 45.3
HPP92_019878 Vanilla planifolia HOM05D005539 ORTHO05D006644 4.8e-17 92.8 117 44.4
SEGI_27471 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 1.3e-14 84.7 84 46.4
Nitab4.5_0001171g0030 Nicotiana tabacum HOM05D005539 ORTHO05D006644 4.5e-07 59.7 49 55.1
Nitab4.5_0003886g0090 Nicotiana tabacum HOM05D005539 ORTHO05D006644 4.5e-07 59.7 49 55.1


User provided reference genes

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