Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G262200 Glycine max HOM05D003438 ORTHO05D004235 1.0e-193 679.9 335 100.0
Glyma.15G276800 Glycine max HOM05D003438 ORTHO05D004235 1.6e-151 539.7 265 97.0
VMungo1080G0040 Vigna mungo HOM05D003438 ORTHO05D000002 5.3e-134 481.5 265 85.3
Phvul.005G022900 Phaseolus vulgaris HOM05D003438 ORTHO05D004235 1.5e-133 479.9 266 85.3
Medtr8g069840 Medicago truncatula HOM05D003438 ORTHO05D004235 5.9e-133 478.0 265 84.9
Psat4g113480 Pisum sativum HOM05D003438 ORTHO05D004235 1.9e-131 473.0 265 84.9
Lj4g0011234 Lotus japonicus HOM05D003438 ORTHO05D004235 1.6e-130 469.9 265 84.9
Lalb_Chr16g0392021 Lupinus albus HOM05D003438 ORTHO05D004235 2.4e-126 456.1 265 81.1
arahy.Tifrunner.gnm1.ann1.2XHE7W Arachis hypogaea HOM05D003438 ORTHO05D004235 1.6e-117 426.8 265 75.5
arahy.Tifrunner.gnm1.ann1.KJ79M0 Arachis hypogaea HOM05D003438 ORTHO05D004235 1.5e-115 420.2 265 74.7
MD16G1052600 Malus domestica HOM05D003438 ORTHO05D004235 1.3e-108 397.1 275 67.3
Haze_11830 Corylus avellana HOM05D003438 ORTHO05D004235 2.2e-108 396.4 263 70.3
Prupe.1G298000 Prunus persica HOM05D003438 ORTHO05D004235 2.2e-108 396.4 275 66.9
Cfa008813 Carpinus fangiana HOM05D003438 ORTHO05D004235 1.1e-107 394.0 263 70.3
RcHm_v2.0_Chr4g0436931 Rosa chinensis HOM05D003438 ORTHO05D004235 1.1e-107 394.0 273 66.3
FvH4_4g28800 Fragaria vesca HOM05D003438 ORTHO05D004235 1.9e-107 393.3 273 67.4
FAN07G2974 Fragaria x ananassa HOM05D003438 ORTHO05D004235 1.9e-107 393.3 273 67.8
FAN12G2600 Fragaria x ananassa HOM05D003438 ORTHO05D004235 2.5e-107 392.9 273 67.4
FAN17G0827 Fragaria x ananassa HOM05D003438 ORTHO05D004235 5.5e-107 391.7 273 67.8
TAR629G1044 Trochodendron aralioides HOM05D003438 ORTHO05D004235 5.5e-107 391.7 265 69.4
Sed0018972 Sechium edule HOM05D003438 ORTHO05D004235 1.2e-106 390.6 265 67.2
Dinv16582 Davidia involucrata HOM05D003438 ORTHO05D004235 1.0e-105 387.5 265 67.9
CANSAT64G0670 Cannabis sativa HOM05D003438 ORTHO05D004235 1.4e-105 387.1 273 63.7
Dinv16579 Davidia involucrata HOM05D003438 ORTHO05D004235 5.2e-105 385.2 265 66.8
ClCG05G023390 Citrullus lanatus HOM05D003438 ORTHO05D004235 7.5e-104 381.3 265 65.3
GSVIVG01010141001 Vitis vinifera HOM05D003438 ORTHO05D004235 9.8e-104 380.9 265 68.3
CsaV3_5G033620 Cucumis sativus L. HOM05D003438 ORTHO05D004235 1.1e-102 377.5 265 64.9
Ciclev10030492m.g Citrus clementina HOM05D003438 ORTHO05D004235 3.1e-102 375.9 274 64.2
CiPaw.05G119100 Carya illinoinensis HOM05D003438 ORTHO05D004235 4.1e-102 375.6 267 66.7
MELO3C012178.2 Cucumis melo HOM05D003438 ORTHO05D004235 4.1e-102 375.6 265 64.9
COL.COLO4_27762 Corchorus olitorius HOM05D003438 ORTHO05D004235 2.0e-101 373.2 274 65.0
Nn4g23588 Nelumbo nucifera HOM05D003438 ORTHO05D004235 3.5e-101 372.5 265 66.8
Thecc.02G318900 Theobroma cacao HOM05D003438 ORTHO05D004235 1.3e-100 370.5 266 68.0
Manes.14G092500 Manihot esculenta HOM05D003438 ORTHO05D004235 1.7e-100 370.2 274 65.0
CSS0041395 Camellia sinensis var. sinensis HOM05D003438 ORTHO05D004235 1.1e-99 367.5 265 64.2
PSO017G4740 Papaver somniferum HOM05D003438 ORTHO05D004235 4.2e-99 365.5 274 63.5
Actinidia30181 Actinidia chinensis HOM05D003438 ORTHO05D004235 9.5e-99 364.4 265 63.4
Potri.010G135500 Populus trichocarpa HOM05D003438 ORTHO05D004235 1.2e-98 364.0 266 64.7
TWI75G0189 Tripterygium wilfordii HOM05D003438 ORTHO05D004235 3.6e-98 362.5 272 64.7
Hma1.2p1_0762F.1_g214440 Hydrangea macrophylla HOM05D003438 ORTHO05D004235 6.1e-98 361.7 267 65.5
Gorai.005G148400 Gossypium raimondii HOM05D003438 ORTHO05D004235 1.0e-97 360.9 266 64.3
Sabra10G0104100 Salix brachista HOM05D003438 ORTHO05D004235 3.0e-97 359.4 266 63.9
MBI14_g11750_MAGBIO Magnolia biondii HOM05D003438 ORTHO05D004235 8.8e-97 357.8 272 60.7
Lj3C1025G4 Lonicera japonica HOM05D003438 ORTHO05D004235 1.2e-96 357.5 293 59.4
THA.LOC104821983 Tarenaya hassleriana HOM05D003438 ORTHO05D004235 4.4e-96 355.5 246 66.7
Duzib251G0072 Durio zibethinus HOM05D003438 ORTHO05D004235 5.7e-96 355.1 274 63.1
EL10Ac6g14628 Beta vulgaris HOM05D003438 ORTHO05D004235 7.5e-96 354.8 265 60.8
AT1G68890 Arabidopsis thaliana HOM05D003438 ORTHO05D004235 1.8e-94 350.1 273 59.7
Sp5g24020 Schrenkiella parvula HOM05D003438 ORTHO05D004235 5.4e-94 348.6 274 60.9
BolC2t08622H Brassica oleracea HOM05D003438 ORTHO05D004235 7.0e-94 348.2 264 62.5
Rhsim09G0118400 Rhododendron simsii HOM05D003438 ORTHO05D004235 9.2e-94 347.8 274 60.2
A02p15460 Brassica napus HOM05D003438 ORTHO05D004235 1.2e-93 347.4 274 60.6
BraA02t06607Z Brassica rapa HOM05D003438 ORTHO05D004235 1.2e-93 347.4 274 60.6
Ca_22511_v3 Cicer arietinum L. HOM05D003438 ORTHO05D004235 2.7e-93 346.3 191 86.9
Aa31sc12G150 Aethionema arabicum HOM05D003438 ORTHO05D004235 3.5e-93 345.9 273 60.8
Atru.chr11.1518 Acer truncatum HOM05D003438 ORTHO05D004235 7.8e-93 344.7 276 60.9
Thhalv10017999m.g Eutrema salsugineum HOM05D003438 ORTHO05D004235 1.0e-92 344.4 273 59.3
DCAR_023734 Daucus carota HOM05D003438 ORTHO05D004235 2.9e-92 342.8 272 58.8
Sc04g0007220 Simmondsia chinensis HOM05D003438 ORTHO05D004235 8.6e-92 341.3 301 56.1
C02p25570 Brassica napus HOM05D003438 ORTHO05D004235 2.5e-91 339.7 264 62.1
Nitab4.5_0000149g0230 Nicotiana tabacum HOM05D003438 ORTHO05D004235 2.5e-91 339.7 263 61.2
CARHR061750 Cardamine hirsuta HOM05D003438 ORTHO05D004235 5.6e-91 338.6 273 59.0
Peaxi162Scf00396g01321 Petunia axillaris HOM05D003438 ORTHO05D004235 1.6e-90 337.0 263 60.8
Aqoxy3G00578 Aquilegia oxysepala HOM05D005717 ORTHO05D004235 2.8e-90 336.3 273 58.2
Nitab4.5_0000591g0100 Nicotiana tabacum HOM05D003438 ORTHO05D004235 1.0e-89 334.3 263 60.8
Sopen04g001190 Solanum pennellii HOM05D003438 ORTHO05D004235 1.4e-89 334.0 265 59.6
Eucgr.G02402 Eucalyptus grandis HOM05D003438 ORTHO05D004235 3.0e-89 332.8 273 58.2
Ah.12g061010 Amaranthus hybridus HOM05D003438 ORTHO05D004235 3.4e-88 329.3 274 56.6
Cc11_g11300 Coffea canephora HOM05D003438 ORTHO05D004235 5.7e-88 328.6 265 60.0
PGR119G1138 Punica granatum HOM05D003438 ORTHO05D004235 8.3e-87 324.7 263 55.5
Cc11_g11320 Coffea canephora HOM05D003438 ORTHO05D004235 1.8e-86 323.6 268 57.5
ATR0691G173 Amborella trichopoda HOM05D003438 ORTHO05D004235 2.0e-85 320.1 266 59.8
MSTRG.795 Avicennia marina HOM05D003438 ORTHO05D004235 2.7e-85 319.7 272 56.6
HPP92_019427 Vanilla planifolia HOM05D003438 ORTHO05D004235 3.5e-85 319.3 265 57.4
BcaB05g24430 Brassica carinata HOM05D003438 ORTHO05D004235 3.0e-84 316.2 253 59.7
SalBow8G3833 Salvia bowleyana HOM05D003438 ORTHO05D004235 8.6e-84 314.7 265 56.6
ECA234G3211 Erigeron canadensis HOM05D003438 ORTHO05D004235 1.5e-83 313.9 266 55.6
Migut.L01140 Erythranthe guttata HOM05D003438 ORTHO05D004235 1.9e-83 313.5 255 59.2
HanXRQChr16g0528311 Helianthus annuus HOM05D003438 ORTHO05D004235 1.8e-81 307.0 266 56.4
CAN.G263.2 Capsicum annuum HOM05D003438 ORTHO05D004235 2.3e-81 306.6 240 60.0
Solyc04g005190.2 Solanum lycopersicum HOM05D003438 ORTHO05D004235 3.4e-80 302.8 240 60.0
SEGI_34733 Sequoiadendron giganteum HOM05D003438 ORTHO05D004235 2.2e-79 300.1 271 51.7
SEGI_27375 Sequoiadendron giganteum HOM05D003438 ORTHO05D004235 2.9e-79 299.7 268 52.2
Zm00001eb245360 Zea mays HOM05D003438 ORTHO05D004235 4.9e-79 298.9 267 50.9
QL03p047172 Quercus lobata HOM05D003438 ORTHO05D004235 3.0e-76 289.7 191 69.1
CDE02G1987 Ceratophyllum demersum HOM05D003438 ORTHO05D004235 2.5e-75 286.6 240 58.3
Lsat_1_v5_gn_4_21341 Lactuca sativa HOM05D003438 ORTHO05D004235 3.1e-73 279.6 227 58.1
Carub.0002s1551 Capsella rubella HOM05D003438 ORTHO05D004235 2.0e-72 276.9 202 64.9
AUR62007840 Chenopodium quinoa HOM05D003438 ORTHO05D004235 1.3e-68 264.2 196 61.7
Hund25139 Selenicereus undatus HOM05D003438 ORTHO05D004235 3.9e-68 262.7 206 59.7
AUR62003034 Chenopodium quinoa HOM05D003438 ORTHO05D004235 4.7e-66 255.8 191 61.8
vmacro10455 Vaccinium macrocarpon HOM05D003438 ORTHO05D004235 2.4e-65 253.4 200 58.0
HPP92_019404 Vanilla planifolia HOM05D003438 ORTHO05D004235 3.8e-63 246.1 196 59.2
SMO270G0066 Selaginella moellendorffii HOM05D003438 ORTHO05D004235 8.4e-63 245.0 250 47.6
Mapoly0195s0004 Marchantia polymorpha HOM05D003438 ORTHO05D004235 1.9e-59 233.8 268 44.4
AagrBONN_evm.TU.Sc2ySwM_228.2269 Anthoceros agrestis HOM05D003438 ORTHO05D004235 1.2e-58 231.1 266 44.7
Pp3c9_10620 Physcomitrium patens HOM05D003438 ORTHO05D004235 2.0e-56 223.8 277 42.2
SGA_v2.0_scaffold16G07841 Striga asiatica HOM05D003438 ORTHO05D004235 8.4e-55 218.4 191 55.5
Gohir.A03G107400 Gossypium hirsutum HOM05D003438 ORTHO05D004235 4.6e-53 212.6 166 60.8
PSO478G2917 Papaver somniferum HOM05D003438 ORTHO05D004235 1.1e-51 208.0 274 42.7
HPP92_019426 Vanilla planifolia HOM05D003438 ORTHO05D004235 3.3e-51 206.5 191 53.4
Rhsim13G0143500 Rhododendron simsii HOM05D003438 ORTHO05D004235 2.8e-42 176.8 169 52.7
PRCOL_00004179 Prasinoderma coloniale HOM05D003438 ORTHO05D004235 2.0e-24 117.5 256 32.8
MCO05G676 Micromonas commoda HOM05D003438 ORTHO05D004235 9.4e-22 108.6 264 31.1
Cre16.g659050 Chlamydomonas reinhardtii HOM05D003438 ORTHO05D004235 2.5e-19 100.5 339 27.1
QL03p047161 Quercus lobata HOM05D003438 ORTHO05D000004 7.4e-19 99.0 75 58.7
unitig_699.g19901 Utricularia gibba HOM05D003438 ORTHO05D004235 1.3e-18 98.2 93 50.5
Hma1.2p1_0762F.1_g214450 Hydrangea macrophylla HOM05D003438 ORTHO05D004235 5.1e-12 76.3 65 56.9
CBR_g48055 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-10 71.6 91 39.6


User provided reference genes

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