Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G203700 Glycine max HOM05D001758 ORTHO05D005969 5.3e-72 274.2 137 100.0
Glyma.04G080000 Glycine max HOM05D001758 ORTHO05D005969 4.1e-48 194.9 116 85.3
Glyma.06G081600 Glycine max HOM05D001758 ORTHO05D005969 2.6e-47 192.2 116 86.2
Phvul.009G105700 Phaseolus vulgaris HOM05D001758 ORTHO05D005969 4.5e-47 191.4 116 83.6
VMungo1309G1162 Vigna mungo HOM05D001758 ORTHO05D005969 1.3e-46 189.9 116 81.9
Medtr3g109922 Medicago truncatula HOM05D001758 ORTHO05D005969 4.1e-40 168.3 116 76.7
Lalb_Chr08g0243281 Lupinus albus HOM05D001758 ORTHO05D005969 3.4e-39 165.2 116 73.3
Lalb_Chr23g0269421 Lupinus albus HOM05D001758 ORTHO05D005969 5.9e-39 164.5 116 73.3
Ca_15621_v3 Cicer arietinum L. HOM05D001758 ORTHO05D005969 5.0e-38 161.4 117 74.4
TPR.G1337 Trifolium pratense HOM05D001758 ORTHO05D005969 5.0e-38 161.4 111 75.7
Psat0s2458g0080 Pisum sativum HOM05D001758 ORTHO05D005969 6.5e-38 161.0 118 73.7
Lj1g0012670 Lotus japonicus HOM05D001758 ORTHO05D005969 9.4e-37 157.1 114 72.8
arahy.Tifrunner.gnm1.ann1.QIC87W Arachis hypogaea HOM05D001758 ORTHO05D005969 1.0e-35 153.7 116 69.0
arahy.Tifrunner.gnm1.ann1.QHEY06 Arachis hypogaea HOM05D001758 ORTHO05D005969 2.3e-35 152.5 116 69.0
GSVIVG01035675001 Vitis vinifera HOM05D001758 ORTHO05D005969 6.5e-30 134.4 114 58.8
Cfa013340 Carpinus fangiana HOM05D001758 ORTHO05D005969 2.5e-29 132.5 114 58.8
Haze_21844 Corylus avellana HOM05D001758 ORTHO05D005969 1.2e-28 130.2 114 57.9
TWI63G1177 Tripterygium wilfordii HOM05D001758 ORTHO05D005969 4.7e-28 128.3 114 57.9
Prupe.1G453100 Prunus persica HOM05D001758 ORTHO05D005969 1.8e-27 126.3 114 57.9
TWI34G1998 Tripterygium wilfordii HOM05D000335 ORTHO05D005969 3.9e-27 125.2 114 58.8
Nn2g11730 Nelumbo nucifera HOM05D001758 ORTHO05D005969 6.7e-27 124.4 114 56.1
Dinv30252 Davidia involucrata HOM05D001758 ORTHO05D005969 1.5e-26 123.2 114 57.9
PGR031G3817 Punica granatum HOM05D001758 ORTHO05D005969 3.3e-26 122.1 114 59.6
TAR626G0957 Trochodendron aralioides HOM05D001758 ORTHO05D005969 3.3e-26 122.1 114 54.4
RcHm_v2.0_Chr6g0305701 Rosa chinensis HOM05D001758 ORTHO05D005969 9.7e-26 120.6 114 54.4
Sed0018896 Sechium edule HOM05D001758 ORTHO05D005969 9.7e-26 120.6 118 59.3
Cc08_g08960 Coffea canephora HOM05D001758 ORTHO05D005969 1.3e-25 120.2 114 56.1
MD15G1098200 Malus domestica HOM05D001758 ORTHO05D005969 1.3e-25 120.2 114 56.1
Eucgr.C01579 Eucalyptus grandis HOM05D001758 ORTHO05D005969 1.7e-25 119.8 116 56.9
MELO3C003587.2 Cucumis melo HOM05D001758 ORTHO05D005969 2.2e-25 119.4 114 57.9
ClCG11G013990 Citrullus lanatus HOM05D001758 ORTHO05D005969 3.7e-25 118.6 114 57.0
Nitab4.5_0003338g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005969 6.3e-25 117.9 115 57.4
FvH4_2g36170 Fragaria vesca HOM05D001758 ORTHO05D005969 8.2e-25 117.5 115 54.8
FAN27G1311 Fragaria x ananassa HOM05D001758 ORTHO05D005969 8.2e-25 117.5 115 54.8
MD08G1118900 Malus domestica HOM05D001758 ORTHO05D005969 1.1e-24 117.1 114 55.3
Nitab4.5_0000052g0050 Nicotiana tabacum HOM05D001758 ORTHO05D005969 1.1e-24 117.1 115 56.5
CAN.G797.6 Capsicum annuum HOM05D001758 ORTHO05D005969 1.4e-24 116.7 114 53.5
COL.COLO4_18700 Corchorus olitorius HOM05D001758 ORTHO05D005969 1.4e-24 116.7 114 55.3
FAN20G3112 Fragaria x ananassa HOM05D001758 ORTHO05D005969 1.4e-24 116.7 115 53.9
Hma1.2p1_1255F.1_g270630 Hydrangea macrophylla HOM05D001758 ORTHO05D005969 1.4e-24 116.7 115 60.9
Hma1.2p1_1434F.1_g283103 Hydrangea macrophylla HOM05D001758 ORTHO05D005969 1.4e-24 116.7 115 60.9
TAR383G0857 Trochodendron aralioides HOM05D001758 ORTHO05D005969 1.4e-24 116.7 114 52.6
Ciclev10007447m.g Citrus clementina HOM05D001758 ORTHO05D005969 3.1e-24 115.5 114 60.5
Peaxi162Scf00523g00067 Petunia axillaris HOM05D001758 ORTHO05D005969 3.1e-24 115.5 115 55.7
CsaV3_3G047380 Cucumis sativus L. HOM05D001758 ORTHO05D005969 4.1e-24 115.2 114 56.1
Manes.16G066200 Manihot esculenta HOM05D001758 ORTHO05D005969 9.1e-24 114.0 114 51.8
CSS0042291 Camellia sinensis var. sinensis HOM05D001758 ORTHO05D005969 1.2e-23 113.6 114 56.1
CSS0047858 Camellia sinensis var. sinensis HOM05D001758 ORTHO05D005969 1.2e-23 113.6 114 56.1
Hma1.2p1_1434F.1_g283100 Hydrangea macrophylla HOM05D001758 ORTHO05D005969 1.2e-23 113.6 114 59.6
Hund19549 Selenicereus undatus HOM05D001758 ORTHO05D005969 1.2e-23 113.6 115 53.9
Aqoxy7G01649 Aquilegia oxysepala HOM05D001758 ORTHO05D005969 1.6e-23 113.2 114 51.8
FAN15G1147 Fragaria x ananassa HOM05D001758 ORTHO05D005969 1.6e-23 113.2 115 53.0
Thecc.09G039400 Theobroma cacao HOM05D001758 ORTHO05D005969 2.0e-23 112.8 114 54.4
Cpa.g.sc78.83 Carica papaya HOM05D001758 ORTHO05D005969 2.6e-23 112.5 114 56.1
Atru.chr7.2164 Acer truncatum HOM05D001758 ORTHO05D005969 3.5e-23 112.1 114 52.6
Duzib168G2005 Durio zibethinus HOM05D001758 ORTHO05D005969 3.5e-23 112.1 114 55.3
QL12p026333 Quercus lobata HOM05D001758 ORTHO05D005969 4.5e-23 111.7 115 56.5
Duzib187G0196 Durio zibethinus HOM05D001758 ORTHO05D005969 1.0e-22 110.5 114 53.5
Aa31LG3G15700 Aethionema arabicum HOM05D001758 ORTHO05D005969 1.7e-22 109.8 115 53.9
Rhsim07G0153400 Rhododendron simsii HOM05D001758 ORTHO05D005969 2.2e-22 109.4 114 54.4
PGSC0003DMG400014497 Solanum tuberosum HOM05D001758 ORTHO05D005969 3.8e-22 108.6 115 52.2
EL10Ac2g04080 Beta vulgaris HOM05D001758 ORTHO05D005969 5.0e-22 108.2 116 53.4
Sopen08g022070 Solanum pennellii HOM05D001758 ORTHO05D005969 5.0e-22 108.2 114 50.0
MBI01_g06521_MAGBIO Magnolia biondii HOM05D001758 ORTHO05D005969 6.5e-22 107.8 111 51.4
DCAR_004500 Daucus carota HOM05D001758 ORTHO05D005969 1.1e-21 107.1 125 50.4
Hund03441 Selenicereus undatus HOM05D001758 ORTHO05D005969 1.1e-21 107.1 118 52.5
AUR62023022 Chenopodium quinoa HOM05D001758 ORTHO05D005969 1.5e-21 106.7 114 53.5
Solyc08g068210.3 Solanum lycopersicum HOM05D001758 ORTHO05D005969 1.5e-21 106.7 114 49.1
Thhalv10012680m.g Eutrema salsugineum HOM05D001758 ORTHO05D005969 2.5e-21 105.9 115 53.0
Gohir.D08G272500 Gossypium hirsutum HOM05D001758 ORTHO05D005969 3.2e-21 105.5 114 51.8
Gorai.004G290900 Gossypium raimondii HOM05D001758 ORTHO05D005969 3.2e-21 105.5 114 51.8
PSO832G3340 Papaver somniferum HOM05D001758 ORTHO05D005969 7.2e-21 104.4 115 50.4
Potri.006G243100 Populus trichocarpa HOM05D001758 ORTHO05D005969 9.4e-21 104.0 114 53.5
MSTRG.1653 Avicennia marina HOM05D001758 ORTHO05D005969 1.2e-20 103.6 116 50.9
CDE02G2668 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 1.2e-20 103.6 115 48.7
Sp6g32110 Schrenkiella parvula HOM05D001758 ORTHO05D005969 1.6e-20 103.2 115 51.3
CANSAT80G0854 Cannabis sativa HOM05D001758 ORTHO05D005969 2.1e-20 102.8 114 51.8
BcaB08g37054 Brassica carinata HOM05D001758 ORTHO05D005969 2.7e-20 102.4 85 60.0
Sabra06G0190200 Salix brachista HOM05D001758 ORTHO05D005969 2.7e-20 102.4 114 52.6
AUR62009338 Chenopodium quinoa HOM05D001758 ORTHO05D005969 3.6e-20 102.1 80 63.8
Nn8g39166 Nelumbo nucifera HOM05D001758 ORTHO05D005969 3.6e-20 102.1 87 56.3
PSO782G2893 Papaver somniferum HOM05D001758 ORTHO05D005969 3.6e-20 102.1 115 48.7
Gohir.A08G251000 Gossypium hirsutum HOM05D001758 ORTHO05D005969 4.7e-20 101.7 114 50.9
SEGI_39084 Sequoiadendron giganteum HOM05D001758 ORTHO05D005969 4.7e-20 101.7 117 49.6
AL6G22160 Arabidopsis lyrata HOM05D001758 ORTHO05D005969 6.1e-20 101.3 115 51.3
Oeu063247.1 Olea europaea HOM05D001758 ORTHO05D005969 6.1e-20 101.3 114 51.8
BcaC04g19220 Brassica carinata HOM05D001758 ORTHO05D005969 1.0e-19 100.5 114 48.2
BolC9t59361H Brassica oleracea HOM05D001758 ORTHO05D005969 1.0e-19 100.5 114 48.2
Nn8g39170 Nelumbo nucifera HOM05D001758 ORTHO05D005969 1.0e-19 100.5 88 56.8
THA.LOC104799206 Tarenaya hassleriana HOM05D001758 ORTHO05D005969 1.8e-19 99.8 116 50.9
Actinidia15728 Actinidia chinensis HOM05D001758 ORTHO05D005969 2.3e-19 99.4 114 53.5
Carub.0006s0995 Capsella rubella HOM05D001758 ORTHO05D005969 2.3e-19 99.4 115 49.6
MSTRG.14010 Avicennia marina HOM05D001758 ORTHO05D005969 3.0e-19 99.0 121 47.9
C09p65350 Brassica napus HOM05D001758 ORTHO05D005969 4.0e-19 98.6 114 49.1
SalBow1G3543 Salvia bowleyana HOM05D001758 ORTHO05D005969 5.2e-19 98.2 123 48.0
CARHR201730 Cardamine hirsuta HOM05D001758 ORTHO05D005969 6.8e-19 97.8 115 48.7
SGA_v2.0_scaffold169G38643 Striga asiatica HOM05D001758 ORTHO05D005969 6.8e-19 97.8 114 52.6
HPP92_019990 Vanilla planifolia HOM05D001758 ORTHO05D005969 6.8e-19 97.8 115 41.7
BcaB01g05481 Brassica carinata HOM05D001758 ORTHO05D005969 1.5e-18 96.7 114 50.0
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 2.6e-18 95.9 114 49.1
AT5G11490 Arabidopsis thaliana HOM05D001758 ORTHO05D005969 3.4e-18 95.5 115 49.6
ATR0315G064 Amborella trichopoda HOM05D001758 ORTHO05D005969 5.7e-18 94.7 115 47.8
Migut.E01510 Erythranthe guttata HOM05D001758 ORTHO05D005969 9.7e-18 94.0 117 50.4
C03p05770 Brassica napus HOM05D001758 ORTHO05D005969 4.8e-17 91.7 112 49.1
BolC3t13090H Brassica oleracea HOM05D001758 ORTHO05D005969 4.8e-17 91.7 112 49.1
A03p05040 Brassica napus HOM05D001758 ORTHO05D005969 8.3e-17 90.9 111 47.7
BraA03t09838Z Brassica rapa HOM05D001758 ORTHO05D005969 8.3e-17 90.9 111 47.7
unitig_85.g27156 Utricularia gibba HOM05D001758 ORTHO05D005969 7.0e-16 87.8 121 45.5
DCAR_000743 Daucus carota HOM05D001758 ORTHO05D005969 2.9e-14 82.4 90 48.9
Lj8C604G10 Lonicera japonica HOM05D001758 ORTHO05D005969 3.8e-14 82.0 78 60.3
Zm00001eb159350 Zea mays HOM05D001758 ORTHO05D005969 1.5e-13 80.1 118 39.0
ECA246G0078 Erigeron canadensis HOM05D001758 ORTHO05D005969 8.0e-12 74.3 114 43.9
Zm00001eb358720 Zea mays HOM05D001758 ORTHO05D005969 1.4e-11 73.6 118 40.7
Pp3c9_26090 Physcomitrium patens HOM05D001758 ORTHO05D005969 2.8e-09 65.9 120 36.7
Lsat_1_v5_gn_5_45441 Lactuca sativa HOM05D001758 ORTHO05D005969 3.1e-08 62.4 68 47.1
AagrBONN_evm.TU.Sc2ySwM_344.2308 Anthoceros agrestis HOM05D001758 ORTHO05D005969 5.4e-08 61.6 95 35.8
CiPaw.07G207600 Carya illinoinensis HOM05D001758 ORTHO05D005969 3.8e-06 55.5 114 36.0
SMO259G0016 Selaginella moellendorffii HOM05D001758 ORTHO05D005969 3.8e-06 55.5 116 33.6


User provided reference genes

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