Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G188800 Glycine max HOM05D002535 ORTHO05D006846 3.1e-64 248.4 137 100.0
Glyma.02G221300 Glycine max HOM05D002535 ORTHO05D006846 3.8e-54 214.9 136 88.2
Phvul.008G188400 Phaseolus vulgaris HOM05D002535 ORTHO05D006846 5.5e-45 184.5 138 74.6
Ca_05547_v3 Cicer arietinum L. HOM05D002535 ORTHO05D006846 8.8e-43 177.2 137 71.5
VMungo0647G1466 Vigna mungo HOM05D002535 ORTHO05D006846 8.8e-43 177.2 138 71.7
LjContig00155g0000379 Lotus japonicus HOM05D002535 ORTHO05D006846 2.5e-42 175.6 136 73.5
TPR.G5829 Trifolium pratense HOM05D002535 ORTHO05D006846 9.1e-40 167.2 136 69.9
Lalb_Chr10g0103021 Lupinus albus HOM05D002535 ORTHO05D006846 1.0e-38 163.7 137 68.6
Medtr5g068600 Medicago truncatula HOM05D002535 ORTHO05D006846 4.2e-37 158.3 135 66.7
arahy.Tifrunner.gnm1.ann1.DLGH4W Arachis hypogaea HOM05D002535 ORTHO05D006846 9.4e-37 157.1 136 68.4
Psat0s1274g0080 Pisum sativum HOM05D002535 ORTHO05D006846 9.4e-37 157.1 135 64.4
arahy.Tifrunner.gnm1.ann1.HMHY7M Arachis hypogaea HOM05D002535 ORTHO05D006846 1.7e-33 146.4 136 66.2
Psat7g096120 Pisum sativum HOM05D002535 ORTHO05D006846 5.5e-29 131.3 120 60.8
QL09p006081 Quercus lobata HOM05D002535 ORTHO05D006846 2.7e-28 129.0 136 55.9
CiPaw.05G208400 Carya illinoinensis HOM05D002535 ORTHO05D006846 8.8e-27 124.0 135 54.1
Haze_00328 Corylus avellana HOM05D002535 ORTHO05D006846 2.6e-26 122.5 135 54.8
Cfa016132 Carpinus fangiana HOM05D002535 ORTHO05D006846 9.7e-26 120.6 135 54.1
Atru.chr12.2507 Acer truncatum HOM05D002535 ORTHO05D006846 1.4e-24 116.7 136 50.7
Atru.chr12.2530 Acer truncatum HOM05D002535 ORTHO05D006846 1.4e-24 116.7 136 50.7
GSVIVG01038675001 Vitis vinifera HOM05D002535 ORTHO05D006846 2.4e-24 115.9 135 51.9
Gohir.A12G245000 Gossypium hirsutum HOM05D002535 ORTHO05D006846 5.3e-24 114.8 131 56.5
Gohir.D12G245800 Gossypium hirsutum HOM05D002535 ORTHO05D006846 1.0e-22 110.5 137 53.3
Gorai.008G263400 Gossypium raimondii HOM05D002535 ORTHO05D006846 2.9e-22 109.0 131 55.0
Prupe.2G321600 Prunus persica HOM05D002535 ORTHO05D006846 2.5e-21 105.9 135 54.1
CSS0030602 Camellia sinensis var. sinensis HOM05D002535 ORTHO05D006846 5.5e-21 104.8 143 48.3
MD07G1302400 Malus domestica HOM05D002535 ORTHO05D006846 5.5e-21 104.8 135 54.1
CSS0041054 Camellia sinensis var. sinensis HOM05D002535 ORTHO05D006846 7.2e-21 104.4 137 46.7
Potri.012G005000 Populus trichocarpa HOM05D002535 ORTHO05D006846 7.2e-21 104.4 134 52.2
Oeu055378.1 Olea europaea HOM05D002535 ORTHO05D006846 1.6e-20 103.2 135 45.2
FvH4_7g33260 Fragaria vesca HOM05D002535 ORTHO05D006846 3.0e-19 99.0 137 48.2
FAN03G0390 Fragaria x ananassa HOM05D002535 ORTHO05D006846 4.0e-19 98.6 137 48.2
RcHm_v2.0_Chr1g0383251 Rosa chinensis HOM05D002535 ORTHO05D006846 4.0e-19 98.6 135 48.1
FAN10G2813 Fragaria x ananassa HOM05D002535 ORTHO05D006846 5.2e-19 98.2 137 48.2
PSO063G0674 Papaver somniferum HOM05D002535 ORTHO05D006846 6.8e-19 97.8 135 45.9
Duzib084G0662 Durio zibethinus HOM05D002535 ORTHO05D006846 1.2e-18 97.1 129 49.6
PSO782G1442 Papaver somniferum HOM05D002535 ORTHO05D006846 2.0e-18 96.3 135 45.9
vmacro06471 Vaccinium macrocarpon HOM05D002535 ORTHO05D006846 2.0e-18 96.3 135 44.4
CANSAT21G0133 Cannabis sativa HOM05D002535 ORTHO05D006846 4.4e-18 95.1 137 47.4
COL.COLO4_14395 Corchorus olitorius HOM05D002535 ORTHO05D006846 5.7e-18 94.7 138 45.7
Manes.18G108000 Manihot esculenta HOM05D002535 ORTHO05D006846 5.7e-18 94.7 134 47.0
Sabra12G0007000 Salix brachista HOM05D002535 ORTHO05D006846 5.7e-18 94.7 146 47.3
Sabra12G0000700 Salix brachista HOM05D002535 ORTHO05D006846 7.5e-18 94.4 145 46.2
Eucgr.K00458 Eucalyptus grandis HOM05D002535 ORTHO05D006846 3.7e-17 92.0 127 48.8
Sed0019266 Sechium edule HOM05D002535 ORTHO05D006846 6.3e-17 91.3 139 44.6
Cpa.g.sc3.180 Carica papaya HOM05D002535 ORTHO05D006846 1.4e-16 90.1 146 43.2
TAR375G1062 Trochodendron aralioides HOM05D002535 ORTHO05D006846 1.8e-16 89.7 136 44.9
FAN01G2729 Fragaria x ananassa HOM05D002535 ORTHO05D006846 3.1e-16 89.0 137 47.4
Sc19g0000400 Simmondsia chinensis HOM05D002535 ORTHO05D006846 3.1e-16 89.0 134 40.3
Nitab4.5_0000021g0180 Nicotiana tabacum HOM05D002535 ORTHO05D006846 4.1e-16 88.6 133 44.4
ClCG07G009730 Citrullus lanatus HOM05D002535 ORTHO05D006846 9.1e-16 87.4 137 43.8
MBI04_g09825_MAGBIO Magnolia biondii HOM05D002535 ORTHO05D006846 1.2e-15 87.0 133 44.4
Hund21077 Selenicereus undatus HOM05D002535 ORTHO05D006846 1.2e-15 87.0 133 45.1
Nitab4.5_0004582g0020 Nicotiana tabacum HOM05D002535 ORTHO05D006846 2.7e-15 85.9 133 42.1
PGSC0003DMG400000575 Solanum tuberosum HOM05D002535 ORTHO05D006846 3.5e-15 85.5 137 44.5
DCAR_010560 Daucus carota HOM05D002535 ORTHO05D006846 1.0e-14 84.0 138 39.9
Solyc03g080010.3 Solanum lycopersicum HOM05D002535 ORTHO05D006846 1.3e-14 83.6 137 43.8
Aqoxy5G04389 Aquilegia oxysepala HOM05D002535 ORTHO05D006846 1.7e-14 83.2 143 36.4
EL10Ac3g05139 Beta vulgaris HOM05D002535 ORTHO05D006846 3.8e-14 82.0 137 41.6
PGR142G0839 Punica granatum HOM05D002535 ORTHO05D006846 5.0e-14 81.6 137 42.3
Migut.F00161 Erythranthe guttata HOM05D002535 ORTHO05D006846 8.5e-14 80.9 134 35.1
AUR62005953 Chenopodium quinoa HOM05D002535 ORTHO05D006846 1.5e-13 80.1 137 41.6
CsaV3_4G009720 Cucumis sativus L. HOM05D002535 ORTHO05D006846 1.9e-13 79.7 140 40.7
Peaxi162Scf01026g00257 Petunia axillaris HOM05D002535 ORTHO05D006846 1.9e-13 79.7 135 42.2
CAN.G303.52 Capsicum annuum HOM05D002535 ORTHO05D006846 3.2e-13 79.0 137 39.4
SGA_v2.0_scaffold44G16838 Striga asiatica HOM05D002535 ORTHO05D006846 4.2e-13 78.6 130 40.8
Ah.13g071000 Amaranthus hybridus HOM05D002535 ORTHO05D006846 9.4e-13 77.4 134 38.1
HanXRQChr14g0452381 Helianthus annuus HOM05D002535 ORTHO05D006846 9.4e-13 77.4 140 38.6
SalBow6G2866 Salvia bowleyana HOM05D002535 ORTHO05D006846 2.1e-12 76.3 135 37.8
MELO3C024845.2 Cucumis melo HOM05D002535 ORTHO05D006846 3.6e-12 75.5 140 39.3
TWI39G1073 Tripterygium wilfordii HOM05D002535 ORTHO05D006846 6.1e-12 74.7 172 34.9
FvH4_7g33280 Fragaria vesca HOM05D002535 ORTHO05D006846 6.8e-11 71.2 115 43.5
Actinidia08716 Actinidia chinensis HOM05D002535 ORTHO05D006846 1.2e-10 70.5 157 33.8
Cc01_g06440 Coffea canephora HOM05D002535 ORTHO05D006846 1.2e-10 70.5 139 40.3
Rhsim03G0218100 Rhododendron simsii HOM05D002535 ORTHO05D006846 2.0e-10 69.7 178 32.6
Hma1.2p1_0115F.1_g055700 Hydrangea macrophylla HOM05D002535 ORTHO05D006846 3.4e-10 68.9 124 41.1
BcaB05g22108 Brassica carinata HOM05D002535 ORTHO05D006846 4.4e-10 68.6 133 42.1
Ciclev10018840m.g Citrus clementina HOM05D002535 ORTHO05D006846 5.7e-10 68.2 158 36.1
C02p17660 Brassica napus HOM05D002535 ORTHO05D006846 9.8e-10 67.4 132 36.4
Lsat_1_v5_gn_2_5220 Lactuca sativa HOM05D002535 ORTHO05D006846 1.3e-09 67.0 133 37.6
AL8G29210 Arabidopsis lyrata HOM05D002535 ORTHO05D006846 1.7e-09 66.6 133 37.6
BraA02t06123Z Brassica rapa HOM05D002535 ORTHO05D006846 1.7e-09 66.6 132 39.4
BcaC03g14353 Brassica carinata HOM05D002535 ORTHO05D006846 2.8e-09 65.9 132 35.6
BolC2t07896H Brassica oleracea HOM05D002535 ORTHO05D006846 2.8e-09 65.9 132 35.6
Thhalv10012724m.g Eutrema salsugineum HOM05D002535 ORTHO05D006846 2.8e-09 65.9 133 36.1
Aa31LG3G9940 Aethionema arabicum HOM05D002535 ORTHO05D006846 4.8e-09 65.1 133 36.8
A02p10580 Brassica napus HOM05D002535 ORTHO05D006846 4.8e-09 65.1 132 38.6
Carub.0008s1437 Capsella rubella HOM05D002535 ORTHO05D006846 4.8e-09 65.1 133 38.3
Os10g0509000 Oryza sativa ssp. japonica HOM05D002535 ORTHO05D006846 4.8e-09 65.1 139 32.4
ATR0579G153 Amborella trichopoda HOM05D002535 ORTHO05D006846 8.3e-09 64.3 128 36.7
Sp6g16120 Schrenkiella parvula HOM05D002535 ORTHO05D006846 8.3e-09 64.3 133 34.6
unitig_748.g7357 Utricularia gibba HOM05D002535 ORTHO05D006846 1.1e-08 63.9 136 33.1
AT5G54090 Arabidopsis thaliana HOM05D002535 ORTHO05D006846 1.4e-08 63.5 133 36.8
CARHR267280 Cardamine hirsuta HOM05D002535 ORTHO05D006846 4.1e-08 62.0 137 36.5
THA.LOC104825164 Tarenaya hassleriana HOM05D002535 ORTHO05D006846 2.0e-07 59.7 128 35.2
Zm00001eb220610 Zea mays HOM05D002535 ORTHO05D006846 2.0e-07 59.7 135 31.9
Pp3c5_20780 Physcomitrium patens HOM05D002535 ORTHO05D006846 7.7e-07 57.8 121 33.9


User provided reference genes

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