Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G152508 Glycine max HOM05D005098 ORTHO05D046693 2.2e-117 425.6 210 100.0
Glyma.13G152440 Glycine max HOM05D005098 ORTHO05D046693 9.6e-33 144.4 70 98.6
Glyma.13G180800 Glycine max HOM05D005098 ORTHO05D006646 9.0e-23 111.3 185 43.2
Glyma.07G195500 Glycine max HOM05D005098 ORTHO05D006646 1.0e-21 107.8 185 42.7
Thecc.06G189900 Theobroma cacao HOM05D005098 ORTHO05D006646 1.0e-21 107.8 192 42.2
VMungo0647G1277 Vigna mungo HOM05D005098 ORTHO05D006646 1.3e-21 107.5 188 41.5
Duzib235G1364 Durio zibethinus HOM05D005098 ORTHO05D006646 1.7e-21 107.1 188 39.4
Rhsim02G0128000 Rhododendron simsii HOM05D005098 ORTHO05D006646 1.7e-21 107.1 205 44.4
Gohir.A10G024700 Gossypium hirsutum HOM05D005098 ORTHO05D006646 2.2e-21 106.7 191 41.9
Dinv40543 Davidia involucrata HOM05D005098 ORTHO05D006646 2.9e-21 106.3 189 39.2
Manes.17G044000 Manihot esculenta HOM05D005098 ORTHO05D006646 2.9e-21 106.3 187 40.1
PSO210G7403 Papaver somniferum HOM05D005098 ORTHO05D006646 2.9e-21 106.3 192 40.1
TAR627G0710 Trochodendron aralioides HOM05D005098 ORTHO05D006646 2.9e-21 106.3 183 41.0
PGR142G2026 Punica granatum HOM05D005098 ORTHO05D006646 3.8e-21 105.9 183 39.9
Gohir.D10G025400 Gossypium hirsutum HOM05D005098 ORTHO05D006646 5.0e-21 105.5 191 41.4
PSO832G2562 Papaver somniferum HOM05D005098 ORTHO05D006646 6.5e-21 105.1 184 40.8
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 1.1e-20 104.4 169 42.6
Actinidia07581 Actinidia chinensis HOM05D005098 ORTHO05D006646 1.4e-20 104.0 184 41.3
Gorai.011G026700 Gossypium raimondii HOM05D005098 ORTHO05D006646 1.4e-20 104.0 191 41.4
TPR.G12033 Trifolium pratense HOM05D005098 ORTHO05D006646 1.4e-20 104.0 184 41.8
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 1.9e-20 103.6 191 39.8
Lj4g0017402 Lotus japonicus HOM05D005098 ORTHO05D006646 1.9e-20 103.6 180 42.2
Eucgr.E03323 Eucalyptus grandis HOM05D005098 ORTHO05D006646 2.5e-20 103.2 184 38.6
arahy.Tifrunner.gnm1.ann1.Q8E5AY Arachis hypogaea HOM05D005098 ORTHO05D006646 3.2e-20 102.8 184 39.7
CSS0027379 Camellia sinensis var. sinensis HOM05D005098 ORTHO05D006646 3.2e-20 102.8 183 43.2
CiPaw.09G058200 Carya illinoinensis HOM05D005098 ORTHO05D006646 3.2e-20 102.8 183 39.9
MD05G1314300 Malus domestica HOM05D005098 ORTHO05D006646 3.2e-20 102.8 187 40.1
Psat7g112680 Pisum sativum HOM05D005098 ORTHO05D006646 3.2e-20 102.8 183 41.5
CsaV3_6G050060 Cucumis sativus L. HOM05D005098 ORTHO05D006646 4.2e-20 102.4 183 41.5
CANSAT35G1139 Cannabis sativa HOM05D005098 ORTHO05D006646 5.5e-20 102.1 184 39.7
Eucgr.E03123 Eucalyptus grandis HOM05D005098 ORTHO05D006646 5.5e-20 102.1 184 38.0
HanXRQChr17g0560221 Helianthus annuus HOM05D005098 ORTHO05D006646 5.5e-20 102.1 235 36.2
Medtr3g072660 Medicago truncatula HOM05D005098 ORTHO05D006646 5.5e-20 102.1 184 40.2
Duzib209G0004 Durio zibethinus HOM05D005098 ORTHO05D006646 7.2e-20 101.7 180 40.0
TWI38G1357 Tripterygium wilfordii HOM05D005098 ORTHO05D006646 7.2e-20 101.7 187 38.5
Atru.chr10.1909 Acer truncatum HOM05D005098 ORTHO05D006646 9.4e-20 101.3 200 39.0
MSTRG.2567 Avicennia marina HOM05D005098 ORTHO05D006646 9.4e-20 101.3 188 39.9
Cc01_g06430 Coffea canephora HOM05D005098 ORTHO05D006646 9.4e-20 101.3 188 39.9
Nitab4.5_0002158g0040 Nicotiana tabacum HOM05D005098 ORTHO05D006646 9.4e-20 101.3 155 45.2
RcHm_v2.0_Chr5g0008121 Rosa chinensis HOM05D005098 ORTHO05D006646 9.4e-20 101.3 183 41.0
FvH4_3g09430 Fragaria vesca HOM05D005098 ORTHO05D006646 1.2e-19 100.9 187 38.5
HPP92_021892 Vanilla planifolia HOM05D005098 ORTHO05D006646 1.2e-19 100.9 184 38.6
Cpa.g.sc27.58 Carica papaya HOM05D005098 ORTHO05D006646 1.6e-19 100.5 171 42.7
Medtr4g088935 Medicago truncatula HOM05D005098 ORTHO05D006646 1.6e-19 100.5 184 39.7
Sabra04G0025700 Salix brachista HOM05D005098 ORTHO05D006646 1.6e-19 100.5 190 37.4
Aqoxy7G02591 Aquilegia oxysepala HOM05D005098 ORTHO05D006646 2.7e-19 99.8 187 40.1
Phvul.002G227900 Phaseolus vulgaris HOM05D005098 ORTHO05D006646 3.6e-19 99.4 175 42.9
Potri.004G041600 Populus trichocarpa HOM05D005098 ORTHO05D006646 3.6e-19 99.4 183 37.7
Prupe.4G044800 Prunus persica HOM05D005098 ORTHO05D006646 3.6e-19 99.4 175 42.9
Lalb_Chr16g0383691 Lupinus albus HOM05D005098 ORTHO05D006646 4.6e-19 99.0 184 38.6
Os04g0680000 Oryza sativa ssp. japonica HOM05D005098 ORTHO05D006646 7.9e-19 98.2 184 38.6
MBI18_g17000_MAGBIO Magnolia biondii HOM05D005098 ORTHO05D006646 1.0e-18 97.8 187 39.0
Nn1g06591 Nelumbo nucifera HOM05D005098 ORTHO05D006646 1.0e-18 97.8 186 39.2
Rhsim10G0081000 Rhododendron simsii HOM05D005098 ORTHO05D006646 1.0e-18 97.8 174 41.4
RhsimUnG0054100 Rhododendron simsii HOM05D005098 ORTHO05D006646 1.0e-18 97.8 174 41.4
DCAR_028090 Daucus carota HOM05D005098 ORTHO05D006646 1.4e-18 97.4 183 38.3
SHI01874 Sapria himalayana HOM05D005098 ORTHO05D006646 1.4e-18 97.4 152 42.1
THA.LOC104814462 Tarenaya hassleriana HOM05D005098 ORTHO05D006646 2.3e-18 96.7 184 36.4
QL05p039825 Quercus lobata HOM05D005098 ORTHO05D006646 3.0e-18 96.3 178 39.3
Solyc02g078440.3 Solanum lycopersicum HOM05D005098 ORTHO05D006646 3.0e-18 96.3 189 38.1
Sopen02g023290 Solanum pennellii HOM05D005098 ORTHO05D006646 3.0e-18 96.3 189 38.1
Zm00001eb065950 Zea mays HOM05D005098 ORTHO05D006646 3.0e-18 96.3 184 40.2
Aa31LG2G13100 Aethionema arabicum HOM05D005098 ORTHO05D006646 6.7e-18 95.1 187 36.9
MD10G1295600 Malus domestica HOM05D005098 ORTHO05D006646 1.1e-17 94.4 217 36.4
Oeu017728.1 Olea europaea HOM05D005098 ORTHO05D006646 2.5e-17 93.2 209 35.4
Ca_18535_v3 Cicer arietinum L. HOM05D005098 ORTHO05D006646 3.3e-17 92.8 119 51.3
ECA234G2003 Erigeron canadensis HOM05D005098 ORTHO05D006646 5.7e-17 92.0 235 34.5
AL7G37700 Arabidopsis lyrata HOM05D005098 ORTHO05D006646 9.7e-17 91.3 183 35.5
Carub.0007s2440 Capsella rubella HOM05D005098 ORTHO05D006646 9.7e-17 91.3 183 35.5
Lj7A690T49 Lonicera japonica HOM05D005098 ORTHO05D006646 9.7e-17 91.3 174 38.5
Sp7g17170 Schrenkiella parvula HOM05D005098 ORTHO05D006646 9.7e-17 91.3 183 35.5
ATR0680G123 Amborella trichopoda HOM05D005098 ORTHO05D006646 1.3e-16 90.9 183 38.3
BcaNung00134 Brassica carinata HOM05D005098 ORTHO05D006646 2.2e-16 90.1 183 35.0
Thhalv10025179m.g Eutrema salsugineum HOM05D005098 ORTHO05D006646 2.2e-16 90.1 183 35.0
BcaC09g50435 Brassica carinata HOM05D005098 ORTHO05D006646 2.8e-16 89.7 183 34.4
A01p20290 Brassica napus HOM05D005098 ORTHO05D006646 2.8e-16 89.7 183 34.4
C01p25440 Brassica napus HOM05D005098 ORTHO05D006646 2.8e-16 89.7 183 34.4
BolC1t02496H Brassica oleracea HOM05D005098 ORTHO05D006646 2.8e-16 89.7 183 34.4
BraA01t01956Z Brassica rapa HOM05D005098 ORTHO05D006646 2.8e-16 89.7 183 34.4
CARHR223580 Cardamine hirsuta HOM05D005098 ORTHO05D006646 3.7e-16 89.4 188 35.1
AT4G17020 Arabidopsis thaliana HOM05D005098 ORTHO05D006646 4.8e-16 89.0 183 35.0
unitig_736.g22566 Utricularia gibba HOM05D005098 ORTHO05D006646 4.8e-16 89.0 202 35.6
Sed0003361 Sechium edule HOM05D005098 ORTHO05D006646 1.1e-15 87.8 178 38.2
Migut.G00672 Erythranthe guttata HOM05D005098 ORTHO05D006646 9.1e-15 84.7 192 36.5
EL10Ac8g20363 Beta vulgaris HOM05D005098 ORTHO05D006646 4.5e-14 82.4 174 36.8
Nitab4.5_0005954g0050 Nicotiana tabacum HOM05D005098 ORTHO05D006646 5.9e-14 82.0 164 39.0
Gohir.D06G130832 Gossypium hirsutum HOM05D005098 ORTHO05D004556 8.5e-13 78.2 44 79.5
vmacro15900 Vaccinium macrocarpon HOM05D005098 ORTHO05D006646 3.2e-12 76.3 36 97.2
Gohir.D09G038350 Gossypium hirsutum HOM05D005098 ORTHO05D006646 4.2e-12 75.9 44 77.3
COL.COLO4_32259 Corchorus olitorius HOM05D005098 ORTHO05D006646 5.5e-12 75.5 49 73.5
Gorai.013G150200 Gossypium raimondii HOM05D003836 ORTHO05D004556 5.5e-12 75.5 44 77.3
Ciclev10009035m.g Citrus clementina HOM05D005098 ORTHO05D006646 7.2e-12 75.1 45 77.8
Sc17g0006240 Simmondsia chinensis HOM05D005098 ORTHO05D006646 7.2e-12 75.1 36 94.4
ClCG01G022890 Citrullus lanatus HOM05D005098 ORTHO05D006646 2.1e-11 73.6 36 91.7
Dinv07544 Davidia involucrata HOM05D005098 ORTHO05D006646 2.1e-11 73.6 36 91.7
FAN21G0237 Fragaria x ananassa HOM05D005098 ORTHO05D006646 2.1e-11 73.6 37 89.2
GSVIVG01002931001 Vitis vinifera HOM05D005098 ORTHO05D006646 2.1e-11 73.6 36 91.7
Peaxi162Scf00736g00425 Petunia axillaris HOM05D005098 ORTHO05D006646 4.7e-11 72.4 41 80.5
Mapoly0047s0044 Marchantia polymorpha HOM05D005098 ORTHO05D006646 6.1e-11 72.0 189 29.1
Aqoxy3G01806 Aquilegia oxysepala HOM05D005098 ORTHO05D006646 1.8e-10 70.5 37 86.5
Pp3c3_5470 Physcomitrium patens HOM05D005098 ORTHO05D006646 2.3e-10 70.1 198 28.8
Lsat_1_v5_gn_4_52761 Lactuca sativa HOM05D005098 ORTHO05D006646 3.0e-10 69.7 36 88.9
SalBow3G0169 Salvia bowleyana HOM05D005098 ORTHO05D006646 3.9e-10 69.3 35 88.6
Haze_05744 Corylus avellana HOM05D005098 ORTHO05D006646 6.7e-10 68.6 36 88.9
CAN.G1164.12 Capsicum annuum HOM05D005098 ORTHO05D006646 8.8e-10 68.2 41 75.6
Hund21233 Selenicereus undatus HOM05D005098 ORTHO05D006646 8.8e-10 68.2 36 83.3
SMO271G0092 Selaginella moellendorffii HOM05D005098 ORTHO05D006646 4.4e-09 65.9 220 26.8
AUR62014801 Chenopodium quinoa HOM05D005098 ORTHO05D006646 5.7e-09 65.5 36 80.6
AUR62016992 Chenopodium quinoa HOM05D005098 ORTHO05D006646 5.7e-09 65.5 36 80.6
Duzib192G0974 Durio zibethinus HOM05D005098 ORTHO05D006646 5.7e-09 65.5 60 61.7
FAN11G1498 Fragaria x ananassa HOM05D005098 ORTHO05D006646 9.7e-09 64.7 60 60.0
FAN16G0038 Fragaria x ananassa HOM05D005098 ORTHO05D006646 9.7e-09 64.7 60 60.0
Ah.09g237250 Amaranthus hybridus HOM05D005098 ORTHO05D006646 1.7e-08 63.9 36 77.8
FAN11G1346 Fragaria x ananassa HOM05D005098 ORTHO05D006646 2.8e-08 63.2 40 75.0
Gorai.006G108000 Gossypium raimondii HOM05D005098 ORTHO05D006646 3.1e-07 59.7 39 76.9
SEGI_32979 Sequoiadendron giganteum HOM05D005098 ORTHO05D006646 5.3e-07 58.9 36 69.4
Nitab4.5_0000119g0020 Nicotiana tabacum HOM05D005098 ORTHO05D006646 1.2e-06 57.8 36 77.8
arahy.Tifrunner.gnm1.ann1.AUX6FS Arachis hypogaea HOM05D005098 ORTHO05D006646 1.5e-06 57.4 38 76.3
SGA_v2.0_scaffold111G31518 Striga asiatica HOM05D005098 ORTHO05D006646 2.6e-06 56.6 172 29.1


User provided reference genes

Program Settings