Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G045200 Glycine max HOM05D001377 ORTHO05D001221 7.1e-114 414.8 392 100.0
Lalb_Chr16g0379031 Lupinus albus HOM05D001377 ORTHO05D001221 3.3e-50 203.4 391 67.8
Ca_22089_v3 Cicer arietinum L. HOM05D001377 ORTHO05D001221 5.8e-47 192.6 358 48.3
Glyma.01G196400 Glycine max HOM05D001377 ORTHO05D001221 1.2e-36 158.3 384 51.6
Ah.03g139510 Amaranthus hybridus HOM05D001034 ORTHO05D000955 1.8e-32 144.4 362 56.1
Glyma.05G109300 Glycine max HOM05D001377 ORTHO05D001221 5.2e-32 142.9 337 57.6
Lalb_Chr09g0335511 Lupinus albus HOM05D001377 ORTHO05D001221 1.2e-31 141.7 374 66.8
Lj4g0025248 Lotus japonicus HOM05D001377 ORTHO05D001221 2.9e-30 137.1 359 61.8
Psat4g080640 Pisum sativum HOM05D001377 ORTHO05D001221 5.4e-29 132.9 359 53.8
arahy.Tifrunner.gnm1.ann1.90HUEH Arachis hypogaea HOM05D001377 ORTHO05D001221 1.6e-28 131.3 365 65.2
Glyma.17G157900 Glycine max HOM05D001377 ORTHO05D001221 4.6e-28 129.8 339 65.2
arahy.Tifrunner.gnm1.ann1.JN41X7 Arachis hypogaea HOM05D001377 ORTHO05D001221 6.0e-28 129.4 346 61.0
AUR62003155 Chenopodium quinoa HOM05D001377 ORTHO05D001221 7.3e-26 122.5 359 52.9
Manes.13G107600 Manihot esculenta HOM05D001377 ORTHO05D001221 4.7e-25 119.8 365 52.9
Phvul.003G232200 Phaseolus vulgaris HOM05D001377 ORTHO05D001221 1.1e-24 118.6 341 62.2
TPR.G3699 Trifolium pratense HOM05D001377 ORTHO05D001221 1.2e-23 115.2 354 56.8
Eucgr.I00661 Eucalyptus grandis HOM05D001377 ORTHO05D001221 2.9e-22 110.5 360 48.3
VMungo0251G3305 Vigna mungo HOM05D001377 ORTHO05D001221 7.1e-21 105.9 334 65.9
Medtr4g097580 Medicago truncatula HOM05D001377 ORTHO05D001221 9.3e-21 105.5 356 54.5
EL10Ac6g14944 Beta vulgaris HOM05D001377 ORTHO05D001221 1.2e-20 105.1 362 51.4
PGR004G0636 Punica granatum HOM05D001377 ORTHO05D001221 7.8e-20 102.4 363 54.5
Actinidia36411 Actinidia chinensis HOM05D001377 ORTHO05D001221 6.6e-19 99.4 211 47.4
Gorai.003G033100 Gossypium raimondii HOM05D001377 ORTHO05D001221 1.1e-18 98.6 386 43.5
CiPaw.07G038400 Carya illinoinensis HOM05D001377 ORTHO05D001221 9.6e-18 95.5 362 47.2
Gohir.D11G212000 Gossypium hirsutum HOM05D001377 ORTHO05D001221 1.1e-16 92.0 356 41.6
Duzib264G0128 Durio zibethinus HOM05D001377 ORTHO05D001221 1.4e-16 91.7 356 43.3
AUR62007977 Chenopodium quinoa HOM05D001377 ORTHO05D001221 1.8e-16 91.3 362 49.7
Thhalv10003578m.g Eutrema salsugineum HOM05D001377 ORTHO05D001221 5.3e-16 89.7 358 50.8
AL8G43490 Arabidopsis lyrata HOM05D001377 ORTHO05D001221 9.0e-16 89.0 189 53.4
CiPaw.08G149100 Carya illinoinensis HOM05D001377 ORTHO05D001221 9.0e-16 89.0 343 45.8
Gohir.D03G031500 Gossypium hirsutum HOM05D001377 ORTHO05D001221 7.6e-15 85.9 386 32.9
Haze_03970 Corylus avellana HOM05D001377 ORTHO05D001221 2.2e-14 84.3 355 45.6
Gohir.A11G211100 Gossypium hirsutum HOM05D001377 ORTHO05D001221 8.4e-14 82.4 356 41.6
Gohir.A02G148800 Gossypium hirsutum HOM05D001377 ORTHO05D001221 1.1e-13 82.0 341 42.5
Actinidia36410 Actinidia chinensis HOM05D001377 ORTHO05D001221 1.4e-13 81.6 104 57.7
CARHR279770 Cardamine hirsuta HOM05D001377 ORTHO05D001221 2.4e-13 80.9 358 43.9
Cpa.g.sc129.57 Carica papaya HOM05D001377 ORTHO05D001221 3.2e-13 80.5 81 59.3
Aa31LG1G16300 Aethionema arabicum HOM05D001377 ORTHO05D001221 7.1e-13 79.3 388 55.2
unitig_0.g494 Utricularia gibba HOM05D001377 ORTHO05D001221 7.1e-13 79.3 363 41.6
arahy.Tifrunner.gnm1.ann1.Q3TKD3 Arachis hypogaea HOM05D001377 ORTHO05D001221 9.3e-13 79.0 90 53.3
RcHm_v2.0_Chr2g0109151 Rosa chinensis HOM05D001377 ORTHO05D001221 9.3e-13 79.0 99 47.5
Dinv23061 Davidia involucrata HOM05D001377 ORTHO05D001221 1.2e-12 78.6 81 56.8
FAN23G0417 Fragaria x ananassa HOM05D001377 ORTHO05D001221 1.6e-12 78.2 103 53.4
MD15G1302600 Malus domestica HOM05D001377 ORTHO05D001221 1.6e-12 78.2 333 41.1
Atru.chr3.1079 Acer truncatum HOM05D001377 ORTHO05D001221 2.1e-12 77.8 326 51.5
Sed0013236 Sechium edule HOM05D001377 ORTHO05D001221 2.1e-12 77.8 358 47.5
Manes.12G118800 Manihot esculenta HOM05D001377 ORTHO05D001221 3.5e-12 77.0 77 59.7
Hund16591 Selenicereus undatus HOM05D001377 ORTHO05D001221 3.5e-12 77.0 362 45.9
COL.COLO4_11633 Corchorus olitorius HOM05D001034 ORTHO05D000955 6.0e-12 76.3 358 30.7
CANSAT01G3006 Cannabis sativa HOM05D001377 ORTHO05D001221 7.9e-12 75.9 67 61.2
CDE02G4321 Ceratophyllum demersum HOM05D001034 ORTHO05D000955 7.9e-12 75.9 348 25.6
Dinv26970 Davidia involucrata HOM05D001377 ORTHO05D001221 1.3e-11 75.1 381 44.4
CSS0028126 Camellia sinensis var. sinensis HOM05D001377 ORTHO05D001221 3.9e-11 73.6 343 54.8
MELO3C007665.2 Cucumis melo HOM05D001377 ORTHO05D001221 3.9e-11 73.6 75 54.7
Lj4A168T50 Lonicera japonica HOM05D001377 ORTHO05D001221 3.9e-11 73.6 375 49.1
ClCG01G017910 Citrullus lanatus HOM05D001377 ORTHO05D001221 6.7e-11 72.8 75 54.7
vmacro05373 Vaccinium macrocarpon HOM05D001377 ORTHO05D001221 6.7e-11 72.8 245 61.2
A06p32630 Brassica napus HOM05D000737 ORTHO05D000581 8.7e-11 72.4 243 49.4
Sc16g0000890 Simmondsia chinensis HOM05D001377 ORTHO05D001221 2.5e-10 70.9 360 50.3
QL06p038381 Quercus lobata HOM05D001377 ORTHO05D001221 3.3e-10 70.5 72 56.9
BraA06t26191Z Brassica rapa HOM05D000737 ORTHO05D000581 4.3e-10 70.1 182 46.2
Sp2g28870 Schrenkiella parvula HOM05D001377 ORTHO05D001221 4.3e-10 70.1 155 59.4
Prupe.6G214100 Prunus persica HOM05D001377 ORTHO05D001221 5.6e-10 69.7 346 46.0
TWI77G0068 Tripterygium wilfordii HOM05D001377 ORTHO05D001221 9.6e-10 68.9 98 43.9
CsaV3_6G044430 Cucumis sativus L. HOM05D001377 ORTHO05D001221 1.3e-09 68.6 73 52.1
ECA232G1830 Erigeron canadensis HOM05D001377 ORTHO05D001221 3.7e-09 67.0 347 46.7
SalBow3G2766 Salvia bowleyana HOM05D001377 ORTHO05D001221 6.2e-09 66.2 181 54.1
Sed0021007 Sechium edule HOM05D001377 ORTHO05D001221 8.1e-09 65.9 366 44.5
MSTRG.23648 Avicennia marina HOM05D001377 ORTHO05D001221 1.8e-08 64.7 70 48.6
Carub.0008s2667 Capsella rubella HOM05D001377 ORTHO05D001221 1.8e-08 64.7 155 65.8
Rhsim10G0092900 Rhododendron simsii HOM05D001377 ORTHO05D001221 2.4e-08 64.3 73 52.1
MD02G1191400 Malus domestica HOM05D001377 ORTHO05D001221 3.1e-08 63.9 373 38.3
Potri.012G034300 Populus trichocarpa HOM05D001377 ORTHO05D001221 4.0e-08 63.5 333 54.4
BcaB04g20027 Brassica carinata HOM05D001377 ORTHO05D001221 5.3e-08 63.2 350 53.7
MBI16_g11022_MAGBIO Magnolia biondii HOM05D001377 ORTHO05D001221 1.5e-07 61.6 265 34.0
SHI11956 Sapria himalayana HOM05D001034 ORTHO05D000955 2.6e-07 60.8 197 28.9
BcaC01g02835 Brassica carinata HOM05D001377 ORTHO05D001221 4.5e-07 60.1 163 62.6
HPP92_017692 Vanilla planifolia HOM05D001377 ORTHO05D001221 9.9e-07 58.9 387 38.2
FAN26G2388 Fragaria x ananassa HOM05D001377 ORTHO05D001221 2.2e-06 57.8 107 43.0
Ciclev10024751m.g Citrus clementina HOM05D001377 ORTHO05D001221 3.8e-06 57.0 334 43.4
BolC3t18254H Brassica oleracea HOM05D001377 ORTHO05D001221 4.9e-06 56.6 231 58.9
HanXRQChr17g0567751 Helianthus annuus HOM05D001377 ORTHO05D001221 4.9e-06 56.6 357 41.5


User provided reference genes

Program Settings