Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 2.0e-117 425.6 196 100.0
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 5.8e-56 221.5 166 68.1
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 3.9e-52 208.8 166 66.3
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 7.3e-51 204.5 161 65.8
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 3.4e-48 195.7 167 59.9
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 7.6e-48 194.5 163 61.3
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 9.9e-48 194.1 162 61.7
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 1.3e-47 193.7 167 59.3
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 2.2e-47 193.0 167 59.9
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 4.9e-47 191.8 167 59.3
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 1.4e-46 190.3 164 61.0
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 1.9e-46 189.9 132 70.5
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 4.2e-46 188.7 166 57.2
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 4.2e-46 188.7 163 60.7
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 5.4e-46 188.3 169 58.0
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 7.1e-46 188.0 164 61.0
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 1.2e-45 187.2 169 58.6
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 1.6e-45 186.8 164 58.5
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 2.7e-45 186.0 164 61.0
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 4.6e-45 185.3 167 57.5
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 4.6e-45 185.3 157 61.1
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 4.6e-45 185.3 157 61.1
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 7.8e-45 184.5 161 60.9
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 1.3e-44 183.7 161 60.9
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 5.1e-44 181.8 161 60.9
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 5.1e-44 181.8 165 58.2
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 1.1e-43 180.6 166 56.0
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 1.1e-43 180.6 161 59.6
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 1.5e-43 180.3 160 60.0
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 1.5e-43 180.3 168 58.9
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 1.9e-43 179.9 168 56.0
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 2.5e-43 179.5 168 56.0
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 2.5e-43 179.5 166 58.4
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 3.3e-43 179.1 161 57.8
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 3.3e-43 179.1 161 59.0
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 4.3e-43 178.7 169 56.2
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 4.3e-43 178.7 161 59.0
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 4.3e-43 178.7 161 57.1
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 4.3e-43 178.7 161 57.1
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 4.3e-43 178.7 161 57.1
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 4.3e-43 178.7 180 52.8
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 9.6e-43 177.6 163 57.7
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 9.6e-43 177.6 161 55.9
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 1.3e-42 177.2 168 56.5
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 2.1e-42 176.4 158 58.2
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 2.1e-42 176.4 161 56.5
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 2.1e-42 176.4 151 60.9
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 2.1e-42 176.4 168 58.3
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 2.8e-42 176.0 161 58.4
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 2.8e-42 176.0 167 55.7
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 3.6e-42 175.6 167 54.5
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 4.8e-42 175.3 163 57.7
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 4.8e-42 175.3 169 52.7
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 6.2e-42 174.9 163 55.2
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 1.1e-41 174.1 168 54.2
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 1.1e-41 174.1 161 55.9
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 1.4e-41 173.7 166 55.4
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 1.4e-41 173.7 161 55.3
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 1.8e-41 173.3 157 59.2
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 1.8e-41 173.3 167 55.7
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 2.4e-41 172.9 163 55.2
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 2.4e-41 172.9 161 54.0
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 3.1e-41 172.6 164 56.7
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 4.0e-41 172.2 163 57.1
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 1.2e-40 170.6 185 50.8
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 1.2e-40 170.6 186 48.4
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 1.5e-40 170.2 163 56.4
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 4.5e-40 168.7 157 56.1
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 4.5e-40 168.7 168 51.8
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 9.9e-40 167.5 186 47.8
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 1.3e-39 167.2 159 54.7
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 1.7e-39 166.8 206 47.1
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 2.2e-39 166.4 182 49.5
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 3.8e-39 165.6 167 51.5
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 3.8e-39 165.6 152 57.9
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 2.4e-38 162.9 168 50.0
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 4.2e-38 162.2 153 58.8
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 2.7e-37 159.5 81 90.1
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 1.0e-36 157.5 151 57.0
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 5.1e-36 155.2 139 59.0
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 6.7e-36 154.8 151 53.6
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 1.9e-35 153.3 160 54.4
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 5.6e-35 151.8 158 51.3
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 9.6e-35 151.0 86 81.4
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 2.8e-34 149.4 81 82.7
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 3.7e-34 149.1 163 47.2
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 6.2e-34 148.3 132 60.6
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 6.2e-34 148.3 132 60.6
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 1.4e-33 147.1 163 50.3
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 3.1e-33 146.0 158 48.7
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 1.2e-32 144.1 81 80.2
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 5.8e-32 141.7 76 84.2
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 5.8e-32 141.7 81 77.8
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 1.4e-30 137.1 81 75.3
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 2.5e-30 136.3 158 44.3
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 4.2e-30 135.6 147 49.7
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 1.5e-27 127.1 215 39.1
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 1.9e-27 126.7 139 51.8
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 6.2e-26 121.7 135 52.6
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 1.8e-25 120.2 140 47.9
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 5.8e-24 115.2 176 42.0
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 2.9e-23 112.8 166 40.4
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 3.8e-23 112.5 167 36.5
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 3.2e-22 109.4 171 40.9
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 6.7e-20 101.7 128 45.3
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 1.9e-19 100.1 79 60.8
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 4.3e-19 99.0 118 48.3
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 7.4e-19 98.2 154 38.3
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 2.4e-17 93.2 136 44.1
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 1.9e-14 83.6 120 43.3
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 1.8e-12 77.0 43 76.7
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 6.7e-12 75.1 41 82.9
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 8.8e-12 74.7 100 46.0
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 7.4e-11 71.6 43 69.8
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 1.7e-10 70.5 109 39.4
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 5.9e-08 62.0 42 61.9


User provided reference genes

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