Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G278500 Glycine max HOM05D005598 ORTHO05D006587 2.2e-151 538.9 269 100.0
Phvul.007G022800 Phaseolus vulgaris HOM05D005598 ORTHO05D006587 1.3e-138 496.5 271 90.4
VMungo0720G0111 Vigna mungo HOM05D005598 ORTHO05D006587 8.3e-138 493.8 270 91.5
Lalb_Chr02g0146251 Lupinus albus HOM05D005598 ORTHO05D006587 2.3e-132 475.7 269 89.2
Ca_25662_v3 Cicer arietinum L. HOM05D005598 ORTHO05D006587 6.4e-130 467.6 270 87.8
arahy.Tifrunner.gnm1.ann1.8DLZ0X Arachis hypogaea HOM05D005598 ORTHO05D006587 4.6e-128 461.5 269 87.0
arahy.Tifrunner.gnm1.ann1.L8YGTT Arachis hypogaea HOM05D005598 ORTHO05D006587 1.7e-127 459.5 269 85.5
Medtr1g111980 Medicago truncatula HOM05D005598 ORTHO05D006587 1.7e-127 459.5 270 86.3
Lj5g0018811 Lotus japonicus HOM05D005598 ORTHO05D006587 5.0e-127 458.0 269 85.5
TPR.G2473 Trifolium pratense HOM05D005598 ORTHO05D006587 3.6e-125 451.8 270 85.6
Atru.chr12.1043 Acer truncatum HOM05D005598 ORTHO05D006587 3.2e-121 438.7 270 80.7
QL04p046731 Quercus lobata HOM05D005598 ORTHO05D006587 3.2e-121 438.7 269 81.4
CiPaw.13G040600 Carya illinoinensis HOM05D005598 ORTHO05D006587 5.4e-121 438.0 270 81.5
CSS0000091 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 7.1e-121 437.6 270 81.1
TAR636G1340 Trochodendron aralioides HOM05D005598 ORTHO05D006587 7.8e-120 434.1 270 80.7
CsaV3_4G003460 Cucumis sativus L. HOM05D005598 ORTHO05D006587 5.1e-119 431.4 272 80.5
GSVIVG01010722001 Vitis vinifera HOM05D005598 ORTHO05D006587 6.6e-119 431.0 270 80.7
PGR142G4231 Punica granatum HOM05D005598 ORTHO05D006587 8.6e-119 430.6 273 78.8
Haze_03295 Corylus avellana HOM05D005598 ORTHO05D006587 1.5e-118 429.9 281 79.0
Nn6g34854 Nelumbo nucifera HOM05D005598 ORTHO05D006587 1.9e-118 429.5 270 80.4
Rhsim09G0141700 Rhododendron simsii HOM05D005598 ORTHO05D006587 1.9e-118 429.5 270 80.0
MD02G1261600 Malus domestica HOM05D005598 ORTHO05D006587 3.3e-118 428.7 270 79.3
Hund06785 Selenicereus undatus HOM05D005598 ORTHO05D006587 3.3e-118 428.7 271 80.8
MELO3C017716.2 Cucumis melo HOM05D005598 ORTHO05D006587 5.6e-118 427.9 272 79.8
Sc09g0005330 Simmondsia chinensis HOM05D005598 ORTHO05D006587 5.6e-118 427.9 270 78.9
Ciclev10016103m.g Citrus clementina HOM05D005598 ORTHO05D006587 7.3e-118 427.6 270 78.9
AUR62042081 Chenopodium quinoa HOM05D005598 ORTHO05D006587 1.6e-117 426.4 271 79.7
Cc02_g09610 Coffea canephora HOM05D005598 ORTHO05D006587 1.6e-117 426.4 270 79.6
Duzib128G1802 Durio zibethinus HOM05D005598 ORTHO05D006587 4.7e-117 424.9 270 78.9
Gohir.D05G288900 Gossypium hirsutum HOM05D005598 ORTHO05D006587 6.2e-117 424.5 272 78.7
TWI38G0756 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 8.1e-117 424.1 270 78.9
Potri.008G019800 Populus trichocarpa HOM05D005598 ORTHO05D006587 1.1e-116 423.7 270 80.0
Migut.F01603 Erythranthe guttata HOM05D005598 ORTHO05D006587 1.4e-116 423.3 270 78.9
EL10Ac4g08688 Beta vulgaris HOM05D005598 ORTHO05D006587 1.8e-116 422.9 271 79.3
Peaxi162Scf00173g00110 Petunia axillaris HOM05D005598 ORTHO05D006587 3.1e-116 422.2 270 78.5
Lj2C33T4 Lonicera japonica HOM05D005598 ORTHO05D006587 4.0e-116 421.8 270 78.5
Gohir.A05G287700 Gossypium hirsutum HOM05D005598 ORTHO05D006587 5.2e-116 421.4 272 77.6
Nitab4.5_0003590g0030 Nicotiana tabacum HOM05D005598 ORTHO05D006587 5.2e-116 421.4 270 78.1
Eucgr.G02689 Eucalyptus grandis HOM05D005598 ORTHO05D006587 6.8e-116 421.0 269 75.8
Gorai.009G304000 Gossypium raimondii HOM05D005598 ORTHO05D006587 6.8e-116 421.0 272 77.6
Thecc.10G109100 Theobroma cacao HOM05D005598 ORTHO05D006587 1.5e-115 419.9 270 78.9
DCAR_006354 Daucus carota HOM05D005598 ORTHO05D006587 4.4e-115 418.3 270 79.3
Sabra08G0013100 Salix brachista HOM05D005598 ORTHO05D006587 4.4e-115 418.3 271 77.5
Sopen11g002760 Solanum pennellii HOM05D005598 ORTHO05D006587 4.4e-115 418.3 270 77.0
PGSC0003DMG400023970 Solanum tuberosum HOM05D005598 ORTHO05D006587 5.8e-115 417.9 270 77.4
MSTRG.23901 Avicennia marina HOM05D005598 ORTHO05D006587 7.6e-115 417.5 270 77.4
Solyc11g006860.2 Solanum lycopersicum HOM05D005598 ORTHO05D006587 9.9e-115 417.2 270 77.0
ClCG07G015650 Citrullus lanatus HOM05D005598 ORTHO05D006587 1.3e-114 416.8 301 71.8
CAN.G645.19 Capsicum annuum HOM05D005598 ORTHO05D006587 2.9e-114 415.6 270 77.0
RcHm_v2.0_Chr5g0049931 Rosa chinensis HOM05D005598 ORTHO05D006587 3.8e-114 415.2 270 76.7
SalBow6G5745 Salvia bowleyana HOM05D005598 ORTHO05D006587 3.8e-114 415.2 270 78.9
Oeu024809.1 Olea europaea HOM05D005598 ORTHO05D006587 6.4e-114 414.5 303 71.6
Dinv11826 Davidia involucrata HOM05D005598 ORTHO05D006587 8.4e-114 414.1 270 78.9
Lsat_1_v5_gn_2_104400 Lactuca sativa HOM05D005598 ORTHO05D006587 8.4e-114 414.1 264 78.8
Sed0022725 Sechium edule HOM05D005598 ORTHO05D006587 1.1e-113 413.7 270 77.0
HanXRQChr11g0342091 Helianthus annuus HOM05D005598 ORTHO05D006587 5.4e-113 411.4 270 77.0
PSO339G6152 Papaver somniferum HOM05D005598 ORTHO05D006587 7.1e-113 411.0 270 76.7
CDE08G1414 Ceratophyllum demersum HOM05D005598 ORTHO05D006587 2.7e-112 409.1 270 75.9
CANSAT56G2222 Cannabis sativa HOM05D005598 ORTHO05D006587 3.5e-112 408.7 270 75.9
Aqoxy4G02744 Aquilegia oxysepala HOM05D005598 ORTHO05D006587 4.6e-112 408.3 270 76.3
FAN11G2626 Fragaria x ananassa HOM05D005598 ORTHO05D006587 6.0e-112 407.9 270 76.3
THA.LOC104824207 Tarenaya hassleriana HOM05D005598 ORTHO05D006587 1.0e-111 407.1 270 76.3
FvH4_3g27560 Fragaria vesca HOM05D005598 ORTHO05D006587 5.1e-111 404.8 270 75.9
Manes.10G062100 Manihot esculenta HOM05D005598 ORTHO05D006587 1.9e-110 402.9 251 80.1
vmacro10312 Vaccinium macrocarpon HOM05D005598 ORTHO05D006587 3.3e-110 402.1 270 74.8
ATR0820G296 Amborella trichopoda HOM05D005598 ORTHO05D006587 4.3e-110 401.7 269 74.0
ECA238G1649 Erigeron canadensis HOM05D005598 ORTHO05D006587 9.6e-110 400.6 270 75.2
Os11g0153900 Oryza sativa ssp. japonica HOM05D005598 ORTHO05D006587 2.8e-109 399.1 269 74.3
HPP92_000055 Vanilla planifolia HOM05D005598 ORTHO05D006587 2.8e-109 399.1 269 74.7
FAN16G3025 Fragaria x ananassa HOM05D005598 ORTHO05D006587 3.6e-109 398.7 270 74.4
Aa31LG7G12150 Aethionema arabicum HOM05D005598 ORTHO05D006587 1.8e-108 396.4 270 74.1
BcaB06g28035 Brassica carinata HOM05D005598 ORTHO05D006587 4.0e-108 395.2 270 73.7
Nitab4.5_0002586g0090 Nicotiana tabacum HOM05D005598 ORTHO05D006587 8.9e-108 394.0 304 67.8
BraA04t17544Z Brassica rapa HOM05D005598 ORTHO05D006587 1.2e-107 393.7 270 73.3
Sp4g04110 Schrenkiella parvula HOM05D005598 ORTHO05D006587 1.2e-107 393.7 270 73.7
BcaC02g08374 Brassica carinata HOM05D005598 ORTHO05D006587 1.5e-107 393.3 270 73.3
C04p55060 Brassica napus HOM05D005598 ORTHO05D006587 1.5e-107 393.3 270 73.3
BolC4t27046H Brassica oleracea HOM05D005598 ORTHO05D006587 1.5e-107 393.3 270 73.3
A04p19500 Brassica napus HOM05D005598 ORTHO05D006587 2.0e-107 392.9 270 73.0
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 3.4e-107 392.1 255 77.6
AT2G25100 Arabidopsis thaliana HOM05D005598 ORTHO05D006587 5.8e-107 391.3 270 71.9
Carub.0004s0468 Capsella rubella HOM05D005598 ORTHO05D006587 7.6e-107 391.0 270 72.6
Zm00001eb406890 Zea mays HOM05D005598 ORTHO05D006587 6.4e-106 387.9 269 71.0
CARHR116600 Cardamine hirsuta HOM05D005598 ORTHO05D006587 1.4e-105 386.7 270 71.9
MBI01_g02157_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 2.1e-104 382.9 250 76.4
CSS0039611 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 4.3e-102 375.2 284 69.0
Actinidia34728 Actinidia chinensis HOM05D005598 ORTHO05D006587 9.6e-102 374.0 218 83.0
SEGI_12354 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 5.3e-100 368.2 263 68.4
Dinv10930 Davidia involucrata HOM05D005598 ORTHO05D006587 3.4e-99 365.5 215 82.3
TWI63G1098 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 7.6e-99 364.4 269 71.0
unitig_736.g22318 Utricularia gibba HOM05D005598 ORTHO05D006587 7.6e-99 364.4 269 67.3
SGA_v2.0_scaffold62G21319 Striga asiatica HOM05D005598 ORTHO05D006587 1.7e-98 363.2 250 74.0
Cpa.g.c34135 Carica papaya HOM05D005598 ORTHO05D006587 3.9e-95 352.1 208 81.7
Thhalv10000575m.g Eutrema salsugineum HOM05D005598 ORTHO05D006587 3.9e-95 352.1 270 67.0
Prupe.2G069600 Prunus persica HOM05D005598 ORTHO05D006587 4.8e-93 345.1 207 79.7
PSO801G0206 Papaver somniferum HOM05D005598 ORTHO05D006587 1.2e-91 340.5 207 78.7
Psat0s4121g0080 Pisum sativum HOM05D005598 ORTHO05D006587 7.9e-88 327.8 208 79.8
AL4G16260 Arabidopsis lyrata HOM05D005598 ORTHO05D006587 3.2e-81 305.8 210 71.9
DCAR_006363 Daucus carota HOM05D005598 ORTHO05D006587 6.7e-79 298.1 248 68.5
AagrBONN_evm.TU.Sc2ySwM_362.477 Anthoceros agrestis HOM05D005598 ORTHO05D006587 6.9e-76 288.1 267 55.1
Pp3c13_7860 Physcomitrium patens HOM05D005598 ORTHO05D006587 6.9e-76 288.1 218 64.2
AUR62041514 Chenopodium quinoa HOM05D005598 ORTHO05D006587 1.4e-73 280.4 178 79.2
Mapoly0006s0052 Marchantia polymorpha HOM05D005598 ORTHO05D006587 2.1e-72 276.6 267 53.6
Lalb_Chr21g0309151 Lupinus albus HOM05D005598 ORTHO05D006587 3.2e-65 252.7 153 85.6
CiPaw.14G033400 Carya illinoinensis HOM05D005598 ORTHO05D006587 4.5e-59 232.3 260 54.6
SMO347G0320 Selaginella moellendorffii HOM05D005598 ORTHO05D006587 2.0e-54 216.9 259 47.1
Glyma.07G162800 Glycine max HOM05D005598 ORTHO05D006587 5.7e-54 215.3 184 67.4
Psat4g059000 Pisum sativum HOM05D005598 ORTHO05D006587 6.3e-53 211.8 117 82.1
Cre17.g701350 Chlamydomonas reinhardtii HOM05D005598 ORTHO05D006587 6.3e-45 185.3 268 38.4
Haze_26455 Corylus avellana HOM05D005598 ORTHO05D006587 8.0e-40 168.3 229 42.4
CBR_g29781 Chara braunii HOM05D005598 ORTHO05D006587 1.4e-39 167.5 145 60.0
MD02G1261400 Malus domestica HOM05D005598 ORTHO05D006587 2.6e-38 163.3 175 53.7
Ah.04g160180 Amaranthus hybridus HOM05D005598 ORTHO05D006587 7.0e-36 155.2 95 80.0
HanXRQChr05g0158341 Helianthus annuus HOM05D005598 ORTHO05D006587 3.8e-34 149.4 107 68.2
Cfa026153 Carpinus fangiana HOM05D005598 ORTHO05D006587 2.3e-31 140.2 230 38.3
Zm00001eb407010 Zea mays HOM05D005598 ORTHO05D006587 4.3e-25 119.4 82 74.4
Lsat_1_v5_gn_9_94660 Lactuca sativa HOM05D005598 ORTHO05D006587 3.6e-16 89.7 60 73.3
Lalb_Chr21g0309161 Lupinus albus HOM05D005598 ORTHO05D006587 1.4e-15 87.8 97 59.8
Psat5g299440 Pisum sativum HOM05D005598 ORTHO05D006587 2.6e-14 83.6 150 37.3
Sabra10G0187600 Salix brachista HOM05D005598 ORTHO05D006587 4.9e-13 79.3 59 62.7
Psat0s449g0080 Pisum sativum HOM05D000909 ORTHO05D000928 2.7e-11 73.6 43 86.0
Psat0s1058g0040 Pisum sativum HOM05D005598 ORTHO05D006587 7.3e-09 65.5 36 88.9
Psat6g162040 Pisum sativum HOM05D005598 ORTHO05D006587 2.1e-08 63.9 83 49.4
BolC8t51460H Brassica oleracea HOM05D005598 ORTHO05D041141 8.9e-07 58.5 42 71.4
ClCG05G021840 Citrullus lanatus HOM05D005598 ORTHO05D006587 7.5e-06 55.5 94 41.5


User provided reference genes

Program Settings