Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G148900 Glycine max HOM05D006444 ORTHO05D007748 5.0e-185 651.0 333 100.0
Phvul.007G199800 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 5.1e-129 464.9 335 73.1
VMungo0720G1741 Vigna mungo HOM05D006444 ORTHO05D007748 3.1e-126 455.7 333 73.3
Glyma.03G233000 Glycine max HOM05D006444 ORTHO05D007748 7.2e-107 391.3 332 65.4
TPR.G1652 Trifolium pratense HOM05D006444 ORTHO05D007748 1.2e-106 390.6 333 63.1
Ca_09322_v3 Cicer arietinum L. HOM05D006444 ORTHO05D007748 1.5e-104 383.6 332 61.1
Glyma.19G230000 Glycine max HOM05D006444 ORTHO05D007748 1.5e-104 383.6 332 63.9
Medtr7g112320 Medicago truncatula HOM05D006444 ORTHO05D007748 1.7e-103 380.2 333 61.3
Phvul.001G226600 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 4.8e-103 378.6 334 62.9
VMungo1383G3166 Vigna mungo HOM05D006444 ORTHO05D007748 1.1e-102 377.5 333 62.8
Lalb_Chr18g0045971 Lupinus albus HOM05D006444 ORTHO05D007748 1.5e-101 373.6 328 59.1
Lj1g0016861 Lotus japonicus HOM05D006444 ORTHO05D007748 1.6e-98 363.6 344 59.0
arahy.Tifrunner.gnm1.ann1.T18680 Arachis hypogaea HOM05D006444 ORTHO05D007748 6.1e-98 361.7 333 58.6
arahy.Tifrunner.gnm1.ann1.I0464U Arachis hypogaea HOM05D006444 ORTHO05D007748 3.9e-97 359.0 333 58.3
Haze_04092 Corylus avellana HOM05D006444 ORTHO05D007748 1.2e-93 347.4 335 56.1
QL03p017976 Quercus lobata HOM05D006444 ORTHO05D007748 1.3e-92 344.0 332 56.9
CiPaw.07G026800 Carya illinoinensis HOM05D006444 ORTHO05D007748 3.2e-91 339.3 321 56.4
Ciclev10001747m.g Citrus clementina HOM05D006444 ORTHO05D007748 3.2e-91 339.3 334 56.3
Dinv30860 Davidia involucrata HOM05D006444 ORTHO05D007748 9.4e-91 337.8 338 53.6
Thecc.05G319500 Theobroma cacao HOM05D006444 ORTHO05D007748 2.6e-88 329.7 339 54.0
GSVIVG01031202001 Vitis vinifera HOM05D006444 ORTHO05D007748 7.5e-88 328.2 333 53.2
Sabra05G0026600 Salix brachista HOM05D006444 ORTHO05D007748 3.7e-87 325.9 335 53.7
Manes.09G174800 Manihot esculenta HOM05D006444 ORTHO05D007748 1.1e-86 324.3 337 53.4
CSS0047685 Camellia sinensis var. sinensis HOM05D006444 ORTHO05D007748 1.3e-84 317.4 339 52.2
Potri.005G020600 Populus trichocarpa HOM05D006444 ORTHO05D007748 3.8e-84 315.8 335 52.2
Rhsim11G0093000 Rhododendron simsii HOM05D006444 ORTHO05D007748 8.5e-84 314.7 333 50.2
vmacro01541 Vaccinium macrocarpon HOM05D006444 ORTHO05D007748 2.5e-83 313.2 332 50.3
Gohir.A08G207200 Gossypium hirsutum HOM05D006444 ORTHO05D007748 4.2e-83 312.4 336 52.4
PGR031G3221 Punica granatum HOM05D006444 ORTHO05D007748 1.8e-81 307.0 337 50.4
COL.COLO4_04127 Corchorus olitorius HOM05D006444 ORTHO05D007748 1.2e-80 304.3 337 50.1
Eucgr.H03280 Eucalyptus grandis HOM05D006444 ORTHO05D007748 1.2e-80 304.3 337 51.6
Gorai.004G237700 Gossypium raimondii HOM05D006444 ORTHO05D007748 4.4e-80 302.4 336 51.5
ClCG03G017520 Citrullus lanatus HOM05D006444 ORTHO05D007748 9.8e-80 301.2 334 47.9
TWI56G1276 Tripterygium wilfordii HOM05D006444 ORTHO05D007748 2.2e-79 300.1 337 49.9
Gohir.D08G223800 Gossypium hirsutum HOM05D006444 ORTHO05D007748 2.8e-79 299.7 336 51.2
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 1.1e-78 297.7 323 48.9
Prupe.6G316100 Prunus persica HOM05D006444 ORTHO05D007748 1.4e-78 297.4 335 49.9
Sed0009356 Sechium edule HOM05D006444 ORTHO05D007748 2.7e-77 293.1 332 48.5
Hma1.2p1_0472F.1_g159820 Hydrangea macrophylla HOM05D006444 ORTHO05D007748 1.0e-76 291.2 349 48.4
CsaV3_1G038500 Cucumis sativus L. HOM05D006444 ORTHO05D007748 5.0e-76 288.9 327 46.2
Nitab4.5_0014337g0020 Nicotiana tabacum HOM05D006444 ORTHO05D007748 1.5e-75 287.3 335 47.8
Cpa.g.sc48.132 Carica papaya HOM05D006444 ORTHO05D007748 1.6e-74 283.9 384 43.2
Cc10_g14110 Coffea canephora HOM05D006444 ORTHO05D007748 2.1e-74 283.5 335 50.1
Nitab4.5_0002715g0070 Nicotiana tabacum HOM05D006444 ORTHO05D007748 6.1e-74 282.0 335 46.9
TAR365G0240 Trochodendron aralioides HOM05D006444 ORTHO05D007748 6.1e-74 282.0 355 47.9
FAN02G1429 Fragaria x ananassa HOM05D006444 ORTHO05D007748 8.0e-74 281.6 335 48.1
Psat3g013840 Pisum sativum HOM05D006444 ORTHO05D007748 8.0e-74 281.6 257 57.6
RcHm_v2.0_Chr3g0456691 Rosa chinensis HOM05D006444 ORTHO05D007748 8.0e-74 281.6 334 49.1
MELO3C015276.2 Cucumis melo HOM05D006444 ORTHO05D007748 1.5e-72 277.3 327 45.9
FvH4_6g07110 Fragaria vesca HOM05D006444 ORTHO05D007748 2.0e-72 276.9 334 48.2
FAN14G0724 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.0e-72 276.9 334 48.2
FAN05G1290 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.3e-71 274.2 334 47.0
Lsat_1_v5_gn_7_73840 Lactuca sativa HOM05D006444 ORTHO05D007748 2.2e-71 273.5 337 47.5
Nn4g25689 Nelumbo nucifera HOM05D006444 ORTHO05D007748 2.2e-71 273.5 347 45.2
Sopen01g043670 Solanum pennellii HOM05D006444 ORTHO05D007748 2.2e-71 273.5 334 46.1
EL10Ac4g09842 Beta vulgaris HOM05D006444 ORTHO05D007748 6.3e-71 271.9 342 47.4
CANSAT54G2069 Cannabis sativa HOM05D006444 ORTHO05D007748 8.3e-71 271.6 329 45.9
Hund21734 Selenicereus undatus HOM05D006444 ORTHO05D007748 1.8e-70 270.4 342 46.2
Oeu045894.1 Olea europaea HOM05D006444 ORTHO05D007748 4.1e-70 269.2 313 47.3
ECA236G3124 Erigeron canadensis HOM05D006444 ORTHO05D007748 5.4e-70 268.9 316 47.2
Peaxi162Scf00073g00128 Petunia axillaris HOM05D006444 ORTHO05D007748 5.4e-70 268.9 331 47.7
MSTRG.20391 Avicennia marina HOM05D006444 ORTHO05D007748 1.2e-69 267.7 331 46.8
Atru.chr2.132 Acer truncatum HOM05D006444 ORTHO05D007748 2.0e-69 266.9 340 47.1
Oeu028007.2 Olea europaea HOM05D006444 ORTHO05D007748 2.0e-69 266.9 334 46.4
PGSC0003DMG400024779 Solanum tuberosum HOM05D006444 ORTHO05D007748 7.8e-69 265.0 357 43.4
Nn3g21596 Nelumbo nucifera HOM05D006444 ORTHO05D007748 2.3e-68 263.5 350 44.0
THA.LOC104818740 Tarenaya hassleriana HOM05D006444 ORTHO05D007748 3.9e-68 262.7 328 48.5
Migut.B00986 Erythranthe guttata HOM05D006444 ORTHO05D007748 5.0e-68 262.3 348 43.4
CDE09G1197 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 1.6e-66 257.3 201 60.7
Sp2g21090 Schrenkiella parvula HOM05D006444 ORTHO05D007748 2.8e-66 256.5 328 47.3
CAN.G1273.16 Capsicum annuum HOM05D006444 ORTHO05D007748 1.4e-65 254.2 369 43.6
ATR0706G081 Amborella trichopoda HOM05D006444 ORTHO05D007748 1.8e-65 253.8 263 49.4
Aa31LG11G9750 Aethionema arabicum HOM05D006444 ORTHO05D007748 1.5e-64 250.8 328 45.7
Lj5A342G70 Lonicera japonica HOM05D006444 ORTHO05D007748 2.6e-64 250.0 276 50.7
HanXRQChr15g0495151 Helianthus annuus HOM05D006444 ORTHO05D007748 6.4e-63 245.4 335 44.8
CARHR186630 Cardamine hirsuta HOM05D006444 ORTHO05D007748 3.2e-62 243.0 327 44.3
CDE02G1332 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 4.1e-62 242.7 258 50.0
SalBow7G4019 Salvia bowleyana HOM05D006444 ORTHO05D007748 5.4e-62 242.3 310 45.5
SGA_v2.0_scaffold4G01962 Striga asiatica HOM05D006444 ORTHO05D007748 5.4e-62 242.3 343 40.8
PSO357G0038 Papaver somniferum HOM05D006444 ORTHO05D007748 9.2e-62 241.5 276 48.9
Thecc.04G293900 Theobroma cacao HOM05D006444 ORTHO05D007748 2.0e-61 240.4 347 42.9
Duzib151G0636 Durio zibethinus HOM05D006444 ORTHO05D007748 4.6e-61 239.2 350 42.0
BolC7t44660H Brassica oleracea HOM05D006444 ORTHO05D007748 6.0e-61 238.8 306 45.4
A06p37110 Brassica napus HOM05D006444 ORTHO05D007748 7.8e-61 238.4 306 45.4
BraA06t26637Z Brassica rapa HOM05D006444 ORTHO05D007748 7.8e-61 238.4 306 45.4
Thhalv10004624m.g Eutrema salsugineum HOM05D006444 ORTHO05D007748 7.8e-61 238.4 325 44.0
Carub.0006s2458 Capsella rubella HOM05D006444 ORTHO05D007748 1.3e-60 237.7 327 44.6
PSO170G3086 Papaver somniferum HOM05D006444 ORTHO05D007748 1.3e-60 237.7 276 48.6
Sc16g0008870 Simmondsia chinensis HOM05D006444 ORTHO05D007748 1.3e-60 237.7 284 52.8
AT5G26940 Arabidopsis thaliana HOM05D006444 ORTHO05D007748 3.0e-60 236.5 331 44.4
Zm00001eb014130 Zea mays HOM05D006444 ORTHO05D007748 3.0e-60 236.5 257 49.0
AL6G38850 Arabidopsis lyrata HOM05D006444 ORTHO05D007748 1.5e-59 234.2 328 44.8
Aqoxy2G02847 Aquilegia oxysepala HOM05D006444 ORTHO05D007748 5.6e-59 232.3 249 49.4
Ciclev10005435m.g Citrus clementina HOM05D006444 ORTHO05D007748 9.5e-59 231.5 331 43.2
HPP92_011867 Vanilla planifolia HOM05D006444 ORTHO05D007748 1.2e-58 231.1 269 45.4
AUR62005256 Chenopodium quinoa HOM05D006444 ORTHO05D007748 2.3e-57 226.9 291 46.0
C07p41320 Brassica napus HOM05D006444 ORTHO05D007748 5.2e-57 225.7 331 42.0
AUR62000705 Chenopodium quinoa HOM05D006444 ORTHO05D007748 3.4e-56 223.0 289 45.3
Hund21730 Selenicereus undatus HOM05D006444 ORTHO05D007748 7.5e-56 221.9 204 54.4
Os03g0301400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 9.8e-56 221.5 267 44.2
RcHm_v2.0_Chr4g0424201 Rosa chinensis HOM05D006444 ORTHO05D007748 8.3e-55 218.4 207 55.6
Prupe.1G126500 Prunus persica HOM05D006444 ORTHO05D007748 1.4e-54 217.6 225 52.0
MD13G1159900 Malus domestica HOM05D006444 ORTHO05D007748 1.7e-52 210.7 241 51.0
unitig_46.g18373 Utricularia gibba HOM05D006444 ORTHO05D007748 3.9e-52 209.5 337 40.1
MBI19_g14287_MAGBIO Magnolia biondii HOM05D006444 ORTHO05D007748 7.3e-51 205.3 240 45.0
Os04g0623400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 7.8e-45 185.3 194 50.5
AagrBONN_evm.TU.Sc2ySwM_344.4230 Anthoceros agrestis HOM05D006444 ORTHO05D007748 2.3e-44 183.7 197 48.2
Mapoly0162s0013 Marchantia polymorpha HOM05D006444 ORTHO05D007748 2.8e-42 176.8 198 46.0
FAN07G1328 Fragaria x ananassa HOM05D006444 ORTHO05D007748 3.1e-41 173.3 204 48.0
FvH4_4g19220 Fragaria vesca HOM05D006444 ORTHO05D007748 5.8e-40 169.1 201 45.3
SMO116G0265 Selaginella moellendorffii HOM05D006444 ORTHO05D007748 3.2e-38 163.3 280 36.8
FAN12G3514 Fragaria x ananassa HOM05D006444 ORTHO05D007748 7.1e-38 162.2 201 45.8
SEGI_10576 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 7.1e-38 162.2 149 52.3
FAN12G0061 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.2e-37 161.4 201 44.8
MD12G1208900 Malus domestica HOM05D006444 ORTHO05D007748 6.6e-36 155.6 195 47.7
Actinidia35534 Actinidia chinensis HOM05D006444 ORTHO05D007748 4.8e-34 149.4 214 44.4
TAR362G0047 Trochodendron aralioides HOM05D006444 ORTHO05D007748 1.2e-32 144.8 209 42.6
Atru.chr4.2940 Acer truncatum HOM05D006444 ORTHO05D007748 1.3e-31 141.4 135 54.1
MD12G1209000 Malus domestica HOM05D006444 ORTHO05D007748 1.3e-31 141.4 134 52.2
FAN09G3591 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.7e-31 141.0 144 54.9
Pp3c18_14120 Physcomitrium patens HOM05D001061 ORTHO05D007748 1.1e-30 138.3 198 36.4
MCO01G157 Micromonas commoda HOM05D005236 ORTHO05D006557 7.9e-21 105.5 184 38.0
Actinidia35535 Actinidia chinensis HOM05D006444 ORTHO05D007748 1.4e-17 94.7 86 59.3
EL10Ac4g09387 Beta vulgaris HOM05D006444 ORTHO05D007748 7.6e-16 89.0 80 58.8
PRCOL_00002449 Prasinoderma coloniale HOM05D005236 ORTHO05D006557 1.9e-11 74.3 201 31.8
SEGI_25648 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 2.5e-06 57.4 73 45.2


User provided reference genes

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