Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.03G078800 Glycine max HOM05D000110 ORTHO05D046694 2.6e-39 164.9 80 100.0
Glyma.15G044800 Glycine max HOM05D000110 ORTHO05D000024 1.8e-35 152.1 80 93.8
Glyma.13G329000 Glycine max HOM05D000110 ORTHO05D000024 2.0e-31 138.7 80 87.5
Phvul.005G137700 Phaseolus vulgaris HOM05D000110 ORTHO05D000024 5.0e-22 107.5 81 66.7
VMungo1080G0532 Vigna mungo HOM05D000110 ORTHO05D000024 5.0e-22 107.5 81 67.9
Phvul.011G071900 Phaseolus vulgaris HOM05D000110 ORTHO05D000024 2.6e-18 95.1 82 64.6
Ca_27411_v3 Cicer arietinum L. HOM05D000110 ORTHO05D000024 2.4e-16 88.6 82 62.2
Lj3g0019123 Lotus japonicus HOM05D000110 ORTHO05D000024 7.0e-16 87.0 85 58.8
VMungo0540G1516 Vigna mungo HOM05D000110 ORTHO05D046694 5.9e-15 84.0 65 64.6
Glyma.12G072400 Glycine max HOM05D000110 ORTHO05D000024 7.7e-15 83.6 84 59.5
Thecc.09G261600 Theobroma cacao HOM05D000110 ORTHO05D000024 1.5e-13 79.3 82 51.2
Haze_23940 Corylus avellana HOM05D000110 ORTHO05D000024 2.5e-13 78.6 85 52.9
Lalb_Chr01g0004111 Lupinus albus HOM05D000110 ORTHO05D000024 3.2e-13 78.2 86 54.7
Lalb_Chr19g0137461 Lupinus albus HOM05D000110 ORTHO05D000024 4.2e-13 77.8 87 54.0
Psat7g222280 Pisum sativum HOM05D000110 ORTHO05D000024 5.5e-13 77.4 83 55.4
Cfa011375 Carpinus fangiana HOM05D000110 ORTHO05D000024 1.6e-12 75.9 66 53.0
QL01p036638 Quercus lobata HOM05D000110 ORTHO05D000024 2.7e-12 75.1 81 50.6
TPR.G2966 Trifolium pratense HOM05D000110 ORTHO05D000024 2.7e-12 75.1 83 55.4
Duzib150G0814 Durio zibethinus HOM05D000110 ORTHO05D000024 4.7e-12 74.3 80 52.5
Glyma.11G151497 Glycine max HOM05D000110 ORTHO05D000024 4.7e-12 74.3 73 56.2
Duzib168G2285 Durio zibethinus HOM05D000110 ORTHO05D000024 1.8e-11 72.4 85 47.1
Manes.04G026400 Manihot esculenta HOM05D000110 ORTHO05D000024 1.8e-11 72.4 80 42.5
Medtr2g093220 Medicago truncatula HOM05D000110 ORTHO05D000024 3.0e-11 71.6 82 51.2
Medtr4g461080 Medicago truncatula HOM05D000110 ORTHO05D000024 3.0e-11 71.6 84 56.0
TWI31G1281 Tripterygium wilfordii HOM05D000110 ORTHO05D000024 6.7e-11 70.5 82 47.6
vmacro03163 Vaccinium macrocarpon HOM05D000110 ORTHO05D000024 6.7e-11 70.5 84 45.2
Cc01_g11670 Coffea canephora HOM05D000110 ORTHO05D000024 8.8e-11 70.1 80 46.2
Manes.11G140300 Manihot esculenta HOM05D000110 ORTHO05D000024 2.0e-10 68.9 81 45.7
TWI79G1620 Tripterygium wilfordii HOM05D000110 ORTHO05D000024 2.0e-10 68.9 81 49.4
Prupe.6G092600 Prunus persica HOM05D000110 ORTHO05D000024 4.4e-10 67.8 81 45.7
Ca_01434_v3 Cicer arietinum L. HOM05D000110 ORTHO05D000024 5.7e-10 67.4 81 45.7
CSS0002654 Camellia sinensis var. sinensis HOM05D000110 ORTHO05D000024 7.5e-10 67.0 80 47.5
CSS0005691 Camellia sinensis var. sinensis HOM05D000110 ORTHO05D000024 7.5e-10 67.0 80 47.5
CSS0007033 Camellia sinensis var. sinensis HOM05D000110 ORTHO05D000024 9.7e-10 66.6 90 46.7
CiPaw.13G105900 Carya illinoinensis HOM05D000110 ORTHO05D000024 9.7e-10 66.6 84 50.0
Duzib170G0489 Durio zibethinus HOM05D000110 ORTHO05D000024 1.3e-09 66.2 84 47.6
GSVIVG01025119001 Vitis vinifera HOM05D000110 ORTHO05D000024 1.3e-09 66.2 70 50.0
COL.COLO4_25261 Corchorus olitorius HOM05D000110 ORTHO05D000024 1.7e-09 65.9 97 45.4
MSTRG.21150 Avicennia marina HOM05D000110 ORTHO05D000024 2.2e-09 65.5 80 41.2
Lalb_Chr22g0350151 Lupinus albus HOM05D000110 ORTHO05D000024 2.2e-09 65.5 80 51.2
TWI75G1872 Tripterygium wilfordii HOM05D000110 ORTHO05D000024 2.8e-09 65.1 82 43.9
Eucgr.J00957 Eucalyptus grandis HOM05D000110 ORTHO05D000024 1.1e-08 63.2 86 44.2
Hma1.2p1_2156F.1_g315410 Hydrangea macrophylla HOM05D000110 ORTHO05D000024 3.1e-08 61.6 80 46.2
Nitab4.5_0007503g0010 Nicotiana tabacum HOM05D000110 ORTHO05D000024 4.1e-08 61.2 82 46.3
arahy.Tifrunner.gnm1.ann1.LKT5QN Arachis hypogaea HOM05D000110 ORTHO05D000024 7.0e-08 60.5 92 42.4
Cpa.g.sc318.1 Carica papaya HOM05D000110 ORTHO05D000024 7.0e-08 60.5 93 41.9
Rhsim13G0091600 Rhododendron simsii HOM05D000110 ORTHO05D000024 1.2e-07 59.7 90 44.4
Dinv32804 Davidia involucrata HOM05D000110 ORTHO05D000024 1.6e-07 59.3 81 39.5
arahy.Tifrunner.gnm1.ann1.XU5EBV Arachis hypogaea HOM05D000110 ORTHO05D000024 2.0e-07 58.9 93 43.0
CAN.G1001.6 Capsicum annuum HOM05D000110 ORTHO05D000024 2.0e-07 58.9 86 40.7
TPR.G11582 Trifolium pratense HOM05D000110 ORTHO05D000024 2.0e-07 58.9 81 49.4
MSTRG.18633 Avicennia marina HOM05D000110 ORTHO05D000024 4.5e-07 57.8 82 42.7
Peaxi162Scf00072g00039 Petunia axillaris HOM05D000110 ORTHO05D000024 7.7e-07 57.0 82 46.3
Peaxi162Scf00389g00621 Petunia axillaris HOM05D000110 ORTHO05D000024 1.0e-06 56.6 85 40.0
Ciclev10028912m.g Citrus clementina HOM05D000110 ORTHO05D000024 1.7e-06 55.8 74 41.9
CiPaw.14G077100 Carya illinoinensis HOM05D000110 ORTHO05D000024 2.2e-06 55.5 78 38.5
MD11G1123400 Malus domestica HOM05D000110 ORTHO05D000024 3.8e-06 54.7 75 42.7
Nitab4.5_0004875g0010 Nicotiana tabacum HOM05D000110 ORTHO05D000024 8.5e-06 53.5 65 49.2


User provided reference genes

Program Settings