Gene: TPR.G2966
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G2966
- Transcript Identifier TPR.T3052
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_LG4 : 26918111-26919700 : negative
Gene Family Information
- ID HOM05D000110
- #Genes/#Species 3051/96
- Phylogenetic origin
- ID ORTHO05D000024
- #Genes/#Species 3751/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA3052.v2
- id Tp57577_TGAC_v2_gene2966.v2
- pacid 35963647
- uniprot A0A2K3LIE4
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0090057 | ISO | PLAZA Integrative Orthology | root radial pattern formation | AT3G45610 |
| GO:0010214 | ISO | PLAZA Integrative Orthology | seed coat development | AT4G21030 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT4G21030 |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT5G60200 |
| GO:0048825 | ISO | PLAZA Integrative Orthology | cotyledon development | AT4G21030 |
| GO:0048359 | ISO | PLAZA Integrative Orthology | mucilage metabolic process involved in seed coat development | AT4G21030 |
| GO:2000032 | ISO | PLAZA Integrative Orthology | regulation of secondary shoot formation | AT4G21030 |
| GO:0010087 | ISO | PLAZA Integrative Orthology | phloem or xylem histogenesis | AT5G60200 |
| GO:0010154 | ISO | PLAZA Integrative Orthology | fruit development | AT4G21050 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT4G21030 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT3G45610 |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0008270 | ISO | PLAZA Integrative Orthology | zinc ion binding | AT2G28510 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT2G28510 |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003851 | Zinc finger, Dof-type |
| Mapman id | Description |
|---|---|
| 15.5.1.5 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (DOF) |