Gene: CSS0002654
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0002654
- Transcript Identifier CSS0002654.1
- Gene Type Coding gene
- Location Chr4 : 155352533-155354138 : negative
Gene Family Information
- ID HOM05D000110
- #Genes/#Species 3051/96
- Phylogenetic origin
- ID ORTHO05D000024
- #Genes/#Species 3751/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid CSS0002654.1
Descriptions
- Description unnamed protein product [Coffea canephora]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT5G60200 |
GO:0010087 | ISO | PLAZA Integrative Orthology | phloem or xylem histogenesis | AT5G60200 |
GO:0090057 | ISO | PLAZA Integrative Orthology | root radial pattern formation | AT3G45610 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0008270 | ISO | PLAZA Integrative Orthology | zinc ion binding | AT2G28510 |
GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT3G45610 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G45610 |
GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT2G28510 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR003851 | Zinc finger, Dof-type |
Mapman id | Description |
---|---|
15.5.1.5 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (DOF) |