Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01035808001 Vitis vinifera HOM05D005914 ORTHO05D007361 2.4e-220 768.5 367 100.0
Haze_21570 Corylus avellana HOM05D005914 ORTHO05D007361 1.9e-169 599.4 393 75.3
Cfa013180 Carpinus fangiana HOM05D005914 ORTHO05D007361 8.9e-167 590.5 393 74.3
QL02p022744 Quercus lobata HOM05D005914 ORTHO05D007361 2.2e-165 585.9 382 74.6
Thecc.09G149100 Theobroma cacao HOM05D005914 ORTHO05D007361 1.3e-162 576.6 392 72.2
CiPaw.07G220900 Carya illinoinensis HOM05D005914 ORTHO05D007361 1.7e-162 576.2 385 73.8
TAR625G1283 Trochodendron aralioides HOM05D005914 ORTHO05D007361 1.7e-162 576.2 393 72.0
TWI63G0300 Tripterygium wilfordii HOM05D005914 ORTHO05D007361 2.5e-161 572.4 382 73.0
RcHm_v2.0_Chr6g0298621 Rosa chinensis HOM05D005914 ORTHO05D007361 2.8e-160 568.9 390 73.8
FvH4_2g29650 Fragaria vesca HOM05D005914 ORTHO05D007361 7.5e-158 560.8 388 71.9
Atru.chr7.2376 Acer truncatum HOM05D005914 ORTHO05D007361 1.7e-157 559.7 391 71.1
Ciclev10008576m.g Citrus clementina HOM05D005914 ORTHO05D007361 2.9e-157 558.9 389 71.7
FAN24G3193 Fragaria x ananassa HOM05D005914 ORTHO05D007361 3.7e-157 558.5 388 71.6
THA.LOC104799221 Tarenaya hassleriana HOM05D005914 ORTHO05D007361 3.7e-157 558.5 378 71.7
Gohir.A08G236800 Gossypium hirsutum HOM05D005914 ORTHO05D007361 1.1e-156 557.0 393 69.0
Actinidia22373 Actinidia chinensis HOM05D005914 ORTHO05D007361 1.9e-156 556.2 389 71.0
Gorai.004G274400 Gossypium raimondii HOM05D005914 ORTHO05D007361 3.5e-155 552.0 379 70.4
MD15G1120500 Malus domestica HOM05D005914 ORTHO05D007361 6.0e-155 551.2 393 71.5
CSS0046358 Camellia sinensis var. sinensis HOM05D005914 ORTHO05D007361 1.0e-154 550.4 379 71.5
Rhsim02G0194500 Rhododendron simsii HOM05D005914 ORTHO05D007361 1.7e-154 549.7 388 69.8
Potri.006G250800 Populus trichocarpa HOM05D005914 ORTHO05D007361 8.6e-154 547.4 385 70.9
CANSAT80G2406 Cannabis sativa HOM05D005914 ORTHO05D007361 5.6e-153 544.7 389 70.7
CANSAT80G0109 Cannabis sativa HOM05D005914 ORTHO05D007361 2.1e-152 542.7 389 70.4
Sabra06G0196100 Salix brachista HOM05D005914 ORTHO05D007361 3.6e-152 542.0 382 70.7
PGR142G2371 Punica granatum HOM05D005914 ORTHO05D007361 6.2e-152 541.2 378 71.4
Aqoxy7G02060 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 2.6e-150 535.8 386 66.6
HanXRQChr13g0402741 Helianthus annuus HOM05D005914 ORTHO05D007361 2.6e-150 535.8 355 72.1
ClCG08G013130 Citrullus lanatus HOM05D005914 ORTHO05D007361 3.4e-150 535.4 387 70.0
A06p36180 Brassica napus HOM05D005914 ORTHO05D007361 4.9e-149 531.6 362 73.8
Eucgr.C01789 Eucalyptus grandis HOM05D005914 ORTHO05D007361 1.9e-148 529.6 380 69.5
BraA06t26540Z Brassica rapa HOM05D005914 ORTHO05D007361 2.4e-148 529.3 359 74.1
arahy.Tifrunner.gnm1.ann1.J9LH1L Arachis hypogaea HOM05D005914 ORTHO05D007361 3.2e-148 528.9 376 69.9
MELO3C011235.2 Cucumis melo HOM05D005914 ORTHO05D007361 4.6e-147 525.0 376 69.7
Lalb_Chr20g0122961 Lupinus albus HOM05D005914 ORTHO05D007361 4.6e-147 525.0 364 71.4
Duzib150G0329 Durio zibethinus HOM05D005914 ORTHO05D007361 7.8e-147 524.2 383 68.7
Thhalv10004397m.g Eutrema salsugineum HOM05D005914 ORTHO05D007361 1.0e-146 523.9 371 71.7
C07p42340 Brassica napus HOM05D005914 ORTHO05D007361 1.3e-146 523.5 376 70.7
Glyma.15G054900 Glycine max HOM05D005914 ORTHO05D007361 1.3e-146 523.5 375 69.6
Aa31LG11G4850 Aethionema arabicum HOM05D005914 ORTHO05D007361 3.9e-146 521.9 372 70.4
arahy.Tifrunner.gnm1.ann1.T9E77A Arachis hypogaea HOM05D005914 ORTHO05D007361 5.1e-146 521.5 375 68.8
Carub.0006s2334 Capsella rubella HOM05D005914 ORTHO05D007361 8.6e-146 520.8 369 71.3
Lj6g0019162 Lotus japonicus HOM05D005914 ORTHO05D007361 8.6e-146 520.8 377 68.7
Sp2g22050 Schrenkiella parvula HOM05D005914 ORTHO05D007361 9.6e-145 517.3 371 70.1
AL6G37280 Arabidopsis lyrata HOM05D005914 ORTHO05D007361 2.8e-144 515.8 369 71.0
AT5G25480 Arabidopsis thaliana HOM05D005914 ORTHO05D007361 2.8e-144 515.8 369 70.5
PSO170G3156 Papaver somniferum HOM05D005914 ORTHO05D007361 6.2e-144 514.6 390 65.6
Cc11_g01820 Coffea canephora HOM05D005914 ORTHO05D007361 2.4e-143 512.7 386 65.5
Migut.E01476 Erythranthe guttata HOM05D005914 ORTHO05D007361 4.0e-143 511.9 373 67.6
Psat1g215880 Pisum sativum HOM05D005914 ORTHO05D007361 5.2e-143 511.5 384 66.9
EL10Ac2g02591 Beta vulgaris HOM05D005914 ORTHO05D007361 2.0e-142 509.6 380 67.1
Ca_00145_v3 Cicer arietinum L. HOM05D005914 ORTHO05D007361 3.4e-142 508.8 379 66.8
Medtr2g009140 Medicago truncatula HOM05D005914 ORTHO05D007361 5.8e-142 508.1 372 68.5
VMungo0540G0716 Vigna mungo HOM05D005914 ORTHO05D007361 5.8e-142 508.1 380 66.6
CAN.G98.27 Capsicum annuum HOM05D005914 ORTHO05D007361 9.9e-142 507.3 368 67.9
Solyc08g067070.3 Solanum lycopersicum HOM05D005914 ORTHO05D007361 4.9e-141 505.0 373 67.0
ECA233G4604 Erigeron canadensis HOM05D005914 ORTHO05D007361 1.1e-140 503.8 352 70.5
CDE04G0852 Ceratophyllum demersum HOM05D005914 ORTHO05D007361 1.9e-140 503.1 387 65.1
Lsat_1_v5_gn_6_22181 Lactuca sativa HOM05D005914 ORTHO05D007361 3.2e-140 502.3 355 70.1
Sopen08g021020 Solanum pennellii HOM05D005914 ORTHO05D007361 4.2e-140 501.9 374 66.6
Nn2g11936 Nelumbo nucifera HOM05D005914 ORTHO05D007361 7.8e-139 497.7 355 70.7
SGA_v2.0_scaffold4G02186 Striga asiatica HOM05D005914 ORTHO05D007361 7.8e-139 497.7 369 66.7
DCAR_006234 Daucus carota HOM05D005914 ORTHO05D007361 1.1e-137 493.8 408 62.7
Nitab4.5_0000151g0200 Nicotiana tabacum HOM05D005914 ORTHO05D007361 5.6e-137 491.5 372 66.7
Nitab4.5_0001669g0040 Nicotiana tabacum HOM05D005914 ORTHO05D007361 1.3e-136 490.3 368 66.6
COL.COLO4_23983 Corchorus olitorius HOM05D005914 ORTHO05D007361 6.9e-135 484.6 383 65.8
HPP92_012620 Vanilla planifolia HOM05D005914 ORTHO05D007361 6.9e-135 484.6 372 63.7
Gohir.D08G257400 Gossypium hirsutum HOM05D005914 ORTHO05D007361 9.0e-135 484.2 379 64.1
arahy.Tifrunner.gnm1.ann1.71PCZ9 Arachis hypogaea HOM05D005914 ORTHO05D007361 6.4e-133 478.0 344 68.6
Sed0010731 Sechium edule HOM05D005914 ORTHO05D007361 4.2e-132 475.3 362 66.6
Zm00001eb358040 Zea mays HOM05D005914 ORTHO05D007361 7.1e-132 474.6 355 64.5
unitig_747.g21653 Utricularia gibba HOM05D005914 ORTHO05D007361 2.6e-126 456.1 364 62.6
BolC7t44763H Brassica oleracea HOM05D005914 ORTHO05D007361 1.2e-123 447.2 337 68.5
Peaxi162Scf00341g00624 Petunia axillaris HOM05D005914 ORTHO05D007361 1.6e-123 446.8 334 65.9
Prupe.1G473200 Prunus persica HOM05D005914 ORTHO05D007361 2.1e-123 446.4 315 70.5
SalBow2G3472 Salvia bowleyana HOM05D005914 ORTHO05D007361 2.3e-122 443.0 364 61.8
Manes.16G119400 Manihot esculenta HOM05D005914 ORTHO05D007361 1.5e-121 440.3 298 73.2
AUR62024878 Chenopodium quinoa HOM05D005914 ORTHO05D007361 2.5e-121 439.5 359 64.1
Dinv11618 Davidia involucrata HOM05D005914 ORTHO05D007361 2.9e-117 426.0 293 72.0
TPR.G25250 Trifolium pratense HOM05D005914 ORTHO05D008190 4.1e-111 405.6 306 66.0
CsaV3_2G031850 Cucumis sativus L. HOM05D005914 ORTHO05D007361 2.7e-107 392.9 380 55.0
SMO146G0196 Selaginella moellendorffii HOM05D005914 ORTHO05D007361 1.3e-104 384.0 355 54.6
Mapoly0011s0185 Marchantia polymorpha HOM05D005914 ORTHO05D007361 9.1e-103 377.9 450 46.9
Pp3c12_2410 Physcomitrium patens HOM05D005914 ORTHO05D007361 5.9e-102 375.2 468 45.9
Phvul.006G205000 Phaseolus vulgaris HOM05D005914 ORTHO05D007361 4.2e-100 369.0 291 63.2
PSO455G0041 Papaver somniferum HOM05D005914 ORTHO05D007361 7.9e-99 364.8 290 62.8
ATR0815G040 Amborella trichopoda HOM05D005914 ORTHO05D007361 1.0e-98 364.4 333 57.7
AUR62030669 Chenopodium quinoa HOM05D005914 ORTHO05D007361 1.8e-98 363.6 312 60.3
FAN27G2538 Fragaria x ananassa HOM05D005914 ORTHO05D007361 5.3e-95 352.1 371 54.2
FAN20G2480 Fragaria x ananassa HOM05D005914 ORTHO05D007361 8.5e-85 318.2 369 50.1
Os01g0612000 Oryza sativa ssp. japonica HOM05D005914 ORTHO05D007361 1.8e-82 310.5 257 61.1
MD08G1143700 Malus domestica HOM05D005914 ORTHO05D007361 5.9e-78 295.4 281 57.7
CBR_g3173 Chara braunii HOM05D005914 ORTHO05D007361 2.9e-77 293.1 538 36.1
MSTRG.13986 Avicennia marina HOM05D005914 ORTHO05D007361 4.7e-75 285.8 241 59.3
CARHR187910 Cardamine hirsuta HOM05D005914 ORTHO05D007361 2.0e-73 280.4 165 80.0
Cpa.g.sc91.41 Carica papaya HOM05D005914 ORTHO05D007361 7.5e-73 278.5 222 64.4
MBI04_g29855_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 1.4e-71 274.2 263 56.3
Lj7C718G14 Lonicera japonica HOM05D005914 ORTHO05D007361 2.0e-70 270.4 261 55.2
MCO14G456 Micromonas commoda HOM05D005914 ORTHO05D007361 4.5e-70 269.2 369 42.8
MBI04_g46184_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 3.8e-69 266.2 344 45.6
PRCOL_00003212 Prasinoderma coloniale HOM05D005914 ORTHO05D007361 2.8e-67 260.0 423 39.0
AagrBONN_evm.TU.Sc2ySwM_228.810 Anthoceros agrestis HOM05D005914 ORTHO05D007361 3.6e-67 259.6 292 47.3
Ah.12g063960 Amaranthus hybridus HOM05D005914 ORTHO05D007361 2.2e-64 250.4 153 76.5
Hma1.2p1_0000F.1_g000780 Hydrangea macrophylla HOM05D005914 ORTHO05D007361 2.2e-64 250.4 216 59.3
RcHm_v2.0_Chr1g0355831 Rosa chinensis HOM05D005914 ORTHO05D007361 1.4e-63 247.7 237 58.6
MD15G1439700 Malus domestica HOM05D005914 ORTHO05D007361 3.5e-54 216.5 403 38.0
Glyma.08G177800 Glycine max HOM05D005914 ORTHO05D007361 1.3e-48 198.0 196 53.6
SEGI_35502 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 3.9e-45 186.4 111 78.4
MCO11G560 Micromonas commoda HOM05D005914 ORTHO05D007361 1.9e-44 184.1 376 33.8
Nitab4.5_0003498g0080 Nicotiana tabacum HOM05D005914 ORTHO05D007361 2.2e-40 170.6 121 71.1
PGR031G2948 Punica granatum HOM05D005914 ORTHO05D007361 3.8e-32 143.3 82 79.3
CAN.G374.12 Capsicum annuum HOM05D005914 ORTHO05D007361 1.2e-30 138.3 292 34.6
Sc09g0008460 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.6e-30 137.9 137 48.9
Cre12.g484600 Chlamydomonas reinhardtii HOM05D005914 ORTHO05D007361 3.5e-30 136.7 175 42.3
Oeu033137.1 Olea europaea HOM05D005914 ORTHO05D007361 2.5e-28 130.6 84 76.2
Sc09g0008440 Simmondsia chinensis HOM05D005914 ORTHO05D007361 2.1e-27 127.5 96 61.5
Sc09g0008580 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.1e-26 125.2 80 72.5
Sc09g0008450 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.5e-25 121.3 80 76.2
TPR.G22731 Trifolium pratense HOM05D005914 ORTHO05D007361 5.4e-23 112.8 65 81.5
Aqoxy7G02061 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 1.3e-19 101.7 62 69.4
SEGI_14251 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 2.8e-19 100.5 66 75.8
SEGI_16557 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 1.8e-18 97.8 55 74.5
Ah.12g063950 Amaranthus hybridus HOM05D005914 ORTHO05D007361 6.4e-16 89.4 120 40.0
MBI04_g46185_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 3.2e-15 87.0 63 60.3
MBI04_g10409_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 1.2e-14 85.1 52 67.3
Sc09g0008540 Simmondsia chinensis HOM05D002899 ORTHO05D003850 2.7e-14 84.0 65 60.0
MD08G1144900 Malus domestica HOM05D005914 ORTHO05D007361 3.1e-10 70.5 86 44.2
MD08G1143600 Malus domestica HOM05D005914 ORTHO05D007361 5.3e-10 69.7 63 52.4
Sc09g0008600 Simmondsia chinensis HOM05D005914 ORTHO05D007361 2.0e-09 67.8 45 68.9
PRCOL_00004583 Prasinoderma coloniale HOM05D000064 ORTHO05D025009 2.2e-08 64.3 356 22.8
MCO11G157 Micromonas commoda HOM05D016551 ORTHO05D025009 8.4e-08 62.4 274 25.9
Lj7A718T66 Lonicera japonica HOM05D005914 ORTHO05D007361 1.9e-07 61.2 56 57.1
Glyma.08G177700 Glycine max HOM05D005914 ORTHO05D007361 3.2e-07 60.5 28 92.9
Ah.12g063940 Amaranthus hybridus HOM05D005914 ORTHO05D007361 4.6e-06 56.6 59 49.2


User provided reference genes

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