Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01033561001 Vitis vinifera HOM05D002215 ORTHO05D002238 1.0e-81 306.6 148 100.0
Actinidia38147 Actinidia chinensis HOM05D002215 ORTHO05D002238 3.7e-15 85.5 149 41.6
Hma1.2p1_0056F.1_g031690 Hydrangea macrophylla HOM05D002215 ORTHO05D002238 1.1e-14 84.0 100 54.0
TAR623G1589 Trochodendron aralioides HOM05D002215 ORTHO05D002238 9.2e-14 80.9 98 50.0
Actinidia17680 Actinidia chinensis HOM05D002215 ORTHO05D002238 4.6e-13 78.6 99 51.5
PGR031G1848 Punica granatum HOM05D002215 ORTHO05D002238 7.8e-13 77.8 94 51.1
CSS0042072 Camellia sinensis var. sinensis HOM05D002215 ORTHO05D002238 1.3e-12 77.0 100 51.0
Cpa.g.sc5.215 Carica papaya HOM05D002215 ORTHO05D002238 1.7e-12 76.6 96 51.0
Rhsim04G0108400 Rhododendron simsii HOM05D002215 ORTHO05D002238 3.9e-12 75.5 98 50.0
QL07p004841 Quercus lobata HOM05D002215 ORTHO05D002238 8.6e-12 74.3 93 49.5
vmacro09035 Vaccinium macrocarpon HOM05D002215 ORTHO05D002238 1.9e-11 73.2 98 50.0
MSTRG.6396 Avicennia marina HOM05D002215 ORTHO05D002238 3.3e-11 72.4 95 47.4
Oeu008185.2 Olea europaea HOM05D002215 ORTHO05D002238 3.3e-11 72.4 98 49.0
TAR636G2431 Trochodendron aralioides HOM05D002215 ORTHO05D002238 9.5e-11 70.9 103 42.7
TAR623G1745 Trochodendron aralioides HOM05D002215 ORTHO05D002238 1.2e-10 70.5 118 39.8
Peaxi162Scf00130g01128 Petunia axillaris HOM05D002215 ORTHO05D002238 2.1e-10 69.7 91 48.4
CiPaw.09G043100 Carya illinoinensis HOM05D002215 ORTHO05D002238 3.6e-10 68.9 94 45.7
Duzib106G1995 Durio zibethinus HOM05D002215 ORTHO05D002238 4.7e-10 68.6 94 46.8
Ciclev10006124m.g Citrus clementina HOM05D002215 ORTHO05D002238 8.1e-10 67.8 94 48.9
Cc06_g18450 Coffea canephora HOM05D002215 ORTHO05D002238 1.4e-09 67.0 97 47.4
DCAR_013620 Daucus carota HOM05D002215 ORTHO05D002238 1.4e-09 67.0 97 46.4
Cfa016744 Carpinus fangiana HOM05D002215 ORTHO05D002238 2.4e-09 66.2 95 49.5
RcHm_v2.0_Chr2g0124241 Rosa chinensis HOM05D002215 ORTHO05D002238 4.0e-09 65.5 99 45.5
FAN05G2790 Fragaria x ananassa HOM05D002215 ORTHO05D002238 5.2e-09 65.1 95 47.4
FAN14G1505 Fragaria x ananassa HOM05D002215 ORTHO05D002238 5.2e-09 65.1 95 47.4
Duzib128G1863 Durio zibethinus HOM05D002215 ORTHO05D002238 8.9e-09 64.3 96 47.9
TAR623G1458 Trochodendron aralioides HOM05D002215 ORTHO05D002238 8.9e-09 64.3 115 38.3
Haze_19759 Corylus avellana HOM05D002215 ORTHO05D002238 1.2e-08 63.9 95 47.4
FvH4_6g24790 Fragaria vesca HOM05D002215 ORTHO05D002238 1.5e-08 63.5 95 46.3
Thecc.05G144400 Theobroma cacao HOM05D002215 ORTHO05D002238 1.5e-08 63.5 98 44.9
Cfa016747 Carpinus fangiana HOM05D002215 ORTHO05D002238 2.0e-08 63.2 95 49.5
Nitab4.5_0001618g0080 Nicotiana tabacum HOM05D002215 ORTHO05D002238 2.6e-08 62.8 92 45.7
Nitab4.5_0008674g0020 Nicotiana tabacum HOM05D002215 ORTHO05D002238 2.6e-08 62.8 92 46.7
MD14G1081500 Malus domestica HOM05D002215 ORTHO05D002238 3.4e-08 62.4 96 43.8
GSVIVG01000857001 Vitis vinifera HOM05D002215 ORTHO05D002238 4.4e-08 62.0 101 40.6
MSTRG.19831 Avicennia marina HOM05D002215 ORTHO05D002238 7.6e-08 61.2 95 45.3
COL.COLO4_21285 Corchorus olitorius HOM05D002215 ORTHO05D002238 7.6e-08 61.2 98 43.9
Solyc04g017690.3 Solanum lycopersicum HOM05D002215 ORTHO05D002238 9.9e-08 60.8 92 45.7
Aqoxy2G00277 Aquilegia oxysepala HOM05D002215 ORTHO05D002238 1.7e-07 60.1 115 38.3
Prupe.7G049200 Prunus persica HOM05D002215 ORTHO05D002238 2.2e-07 59.7 94 41.5
ClCG01G007600 Citrullus lanatus HOM05D002215 ORTHO05D002238 2.9e-07 59.3 117 39.3
Migut.J01696 Erythranthe guttata HOM05D002215 ORTHO05D002238 3.8e-07 58.9 95 44.2
Manes.04G163900 Manihot esculenta HOM05D002215 ORTHO05D002238 4.9e-07 58.5 94 40.4
Atru.chr1.1249 Acer truncatum HOM05D002215 ORTHO05D002238 8.4e-07 57.8 96 45.8
FAN02G2615 Fragaria x ananassa HOM05D002215 ORTHO05D002238 8.4e-07 57.8 95 42.1
Sopen04g008770 Solanum pennellii HOM05D002215 ORTHO05D002238 8.4e-07 57.8 92 44.6
CAN.G1237.26 Capsicum annuum HOM05D002215 ORTHO05D002238 1.1e-06 57.4 92 43.5
CiPaw.10G036900 Carya illinoinensis HOM05D002215 ORTHO05D002238 1.1e-06 57.4 96 41.7
SGA_v2.0_scaffold69G23135 Striga asiatica HOM05D002215 ORTHO05D002238 1.4e-06 57.0 93 44.1
Haze_19757 Corylus avellana HOM05D002215 ORTHO05D002238 1.9e-06 56.6 95 46.3
Glyma.04G138600 Glycine max HOM05D002215 ORTHO05D002238 1.9e-06 56.6 96 38.5
PGSC0003DMG400007624 Solanum tuberosum HOM05D002215 ORTHO05D002238 1.9e-06 56.6 92 45.7
Eucgr.A02291 Eucalyptus grandis HOM05D002215 ORTHO05D002238 2.4e-06 56.2 100 42.0
Haze_03109 Corylus avellana HOM05D002215 ORTHO05D002238 3.2e-06 55.8 122 32.8
SalBow1G7629 Salvia bowleyana HOM05D002215 ORTHO05D002238 3.2e-06 55.8 96 41.7
Psat5g213440 Pisum sativum HOM05D002215 ORTHO05D002238 5.4e-06 55.1 101 35.6
Sed0000241 Sechium edule HOM05D002215 ORTHO05D002238 5.4e-06 55.1 118 39.0


User provided reference genes

Program Settings