Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01031202001 Vitis vinifera HOM05D006444 ORTHO05D007748 1.7e-188 662.5 333 100.0
Dinv30860 Davidia involucrata HOM05D006444 ORTHO05D007748 9.0e-134 480.7 333 72.7
Haze_04092 Corylus avellana HOM05D006444 ORTHO05D007748 9.7e-120 434.1 329 66.6
CSS0047685 Camellia sinensis var. sinensis HOM05D006444 ORTHO05D007748 4.8e-119 431.8 334 65.0
Thecc.05G319500 Theobroma cacao HOM05D006444 ORTHO05D007748 8.2e-119 431.0 334 66.8
Rhsim11G0093000 Rhododendron simsii HOM05D006444 ORTHO05D007748 4.2e-115 418.7 333 62.8
Sabra05G0026600 Salix brachista HOM05D006444 ORTHO05D007748 7.2e-115 417.9 329 62.6
COL.COLO4_04127 Corchorus olitorius HOM05D006444 ORTHO05D007748 4.6e-114 415.2 333 64.6
Manes.09G174800 Manihot esculenta HOM05D006444 ORTHO05D007748 1.0e-113 414.1 332 63.0
QL03p017976 Quercus lobata HOM05D006444 ORTHO05D007748 2.3e-113 412.9 331 64.0
Ciclev10001747m.g Citrus clementina HOM05D006444 ORTHO05D007748 2.5e-112 409.5 333 66.1
TAR365G0240 Trochodendron aralioides HOM05D006444 ORTHO05D007748 2.5e-112 409.5 354 61.6
vmacro01541 Vaccinium macrocarpon HOM05D006444 ORTHO05D007748 9.7e-112 407.5 333 60.7
Potri.005G020600 Populus trichocarpa HOM05D006444 ORTHO05D007748 1.4e-110 403.7 329 61.1
Gohir.A08G207200 Gossypium hirsutum HOM05D006444 ORTHO05D007748 2.4e-110 402.9 329 62.9
CiPaw.07G026800 Carya illinoinensis HOM05D006444 ORTHO05D007748 1.0e-108 397.5 317 65.6
Hma1.2p1_0472F.1_g159820 Hydrangea macrophylla HOM05D006444 ORTHO05D007748 5.0e-108 395.2 351 61.5
Gorai.004G237700 Gossypium raimondii HOM05D006444 ORTHO05D007748 1.1e-107 394.0 329 61.7
Gohir.D08G223800 Gossypium hirsutum HOM05D006444 ORTHO05D007748 4.2e-107 392.1 329 61.7
arahy.Tifrunner.gnm1.ann1.I0464U Arachis hypogaea HOM05D006444 ORTHO05D007748 1.6e-106 390.2 333 59.2
PGR031G3221 Punica granatum HOM05D006444 ORTHO05D007748 2.1e-106 389.8 333 58.0
Medtr7g112320 Medicago truncatula HOM05D006444 ORTHO05D007748 7.9e-106 387.9 333 56.8
Eucgr.H03280 Eucalyptus grandis HOM05D006444 ORTHO05D007748 1.0e-105 387.5 333 59.2
ClCG03G017520 Citrullus lanatus HOM05D006444 ORTHO05D007748 2.3e-105 386.3 327 58.7
arahy.Tifrunner.gnm1.ann1.T18680 Arachis hypogaea HOM05D006444 ORTHO05D007748 3.9e-105 385.6 333 58.9
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 3.3e-104 382.5 322 59.6
Prupe.6G316100 Prunus persica HOM05D006444 ORTHO05D007748 5.7e-104 381.7 332 59.9
TPR.G1652 Trifolium pratense HOM05D006444 ORTHO05D007748 1.3e-103 380.6 333 56.2
Cpa.g.sc48.132 Carica papaya HOM05D006444 ORTHO05D007748 1.4e-102 377.1 379 53.3
Glyma.03G233000 Glycine max HOM05D006444 ORTHO05D007748 5.9e-101 371.7 331 57.4
Glyma.19G230000 Glycine max HOM05D006444 ORTHO05D007748 2.9e-100 369.4 331 57.4
VMungo1383G3166 Vigna mungo HOM05D006444 ORTHO05D007748 8.5e-100 367.9 333 55.6
FAN14G0724 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.5e-99 366.3 335 57.3
Ca_09322_v3 Cicer arietinum L. HOM05D006444 ORTHO05D007748 3.2e-99 365.9 332 55.1
Nitab4.5_0014337g0020 Nicotiana tabacum HOM05D006444 ORTHO05D007748 3.2e-99 365.9 334 56.0
FvH4_6g07110 Fragaria vesca HOM05D006444 ORTHO05D007748 9.4e-99 364.4 335 57.0
FAN05G1290 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.1e-98 363.2 335 57.3
RcHm_v2.0_Chr3g0456691 Rosa chinensis HOM05D006444 ORTHO05D007748 2.1e-98 363.2 335 56.7
Lalb_Chr18g0045971 Lupinus albus HOM05D006444 ORTHO05D007748 2.7e-98 362.8 334 56.0
Nn4g25689 Nelumbo nucifera HOM05D006444 ORTHO05D007748 4.7e-98 362.1 344 56.7
Nitab4.5_0002715g0070 Nicotiana tabacum HOM05D006444 ORTHO05D007748 2.3e-97 359.8 332 55.4
FAN02G1429 Fragaria x ananassa HOM05D006444 ORTHO05D007748 8.8e-97 357.8 334 56.6
Nn3g21596 Nelumbo nucifera HOM05D006444 ORTHO05D007748 1.5e-96 357.1 341 55.4
Sed0009356 Sechium edule HOM05D006444 ORTHO05D007748 2.6e-96 356.3 327 54.7
Atru.chr2.132 Acer truncatum HOM05D006444 ORTHO05D007748 7.4e-96 354.8 327 56.9
Lsat_1_v5_gn_7_73840 Lactuca sativa HOM05D006444 ORTHO05D007748 7.4e-96 354.8 337 55.5
Phvul.001G226600 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 9.7e-96 354.4 333 55.0
Hund21734 Selenicereus undatus HOM05D006444 ORTHO05D007748 2.2e-95 353.2 338 55.9
Sopen01g043670 Solanum pennellii HOM05D006444 ORTHO05D007748 2.4e-94 349.7 334 56.6
Oeu045894.1 Olea europaea HOM05D006444 ORTHO05D007748 4.1e-94 349.0 317 57.1
Lj1g0016861 Lotus japonicus HOM05D006444 ORTHO05D007748 9.1e-94 347.8 344 53.8
Cc10_g14110 Coffea canephora HOM05D006444 ORTHO05D007748 1.6e-93 347.1 334 55.1
Oeu028007.2 Olea europaea HOM05D006444 ORTHO05D007748 2.0e-93 346.7 336 56.5
Peaxi162Scf00073g00128 Petunia axillaris HOM05D006444 ORTHO05D007748 2.6e-93 346.3 332 55.1
TWI56G1276 Tripterygium wilfordii HOM05D006444 ORTHO05D007748 1.7e-92 343.6 329 56.5
Lj5A342G70 Lonicera japonica HOM05D006444 ORTHO05D007748 2.2e-92 343.2 281 63.0
EL10Ac4g09842 Beta vulgaris HOM05D006444 ORTHO05D007748 2.9e-92 342.8 336 54.2
PGSC0003DMG400024779 Solanum tuberosum HOM05D006444 ORTHO05D007748 2.9e-92 342.8 360 52.2
CsaV3_1G038500 Cucumis sativus L. HOM05D006444 ORTHO05D007748 1.5e-88 330.5 328 51.2
Glyma.10G148900 Glycine max HOM05D006444 ORTHO05D007748 2.8e-87 326.2 333 53.2
MSTRG.20391 Avicennia marina HOM05D006444 ORTHO05D007748 8.3e-87 324.7 323 54.8
CANSAT54G2069 Cannabis sativa HOM05D006444 ORTHO05D007748 8.3e-87 324.7 334 55.4
THA.LOC104818740 Tarenaya hassleriana HOM05D006444 ORTHO05D007748 8.3e-87 324.7 332 53.6
CAN.G1273.16 Capsicum annuum HOM05D006444 ORTHO05D007748 1.2e-85 320.9 362 48.9
MELO3C015276.2 Cucumis melo HOM05D006444 ORTHO05D007748 1.6e-85 320.5 328 50.9
ATR0706G081 Amborella trichopoda HOM05D006444 ORTHO05D007748 3.8e-84 315.8 309 53.7
VMungo0720G1741 Vigna mungo HOM05D006444 ORTHO05D007748 3.8e-84 315.8 328 50.9
Phvul.007G199800 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 6.5e-84 315.1 328 50.6
Migut.B00986 Erythranthe guttata HOM05D006444 ORTHO05D007748 5.5e-83 312.0 347 51.6
Aqoxy2G02847 Aquilegia oxysepala HOM05D006444 ORTHO05D007748 2.1e-82 310.1 356 51.1
ECA236G3124 Erigeron canadensis HOM05D006444 ORTHO05D007748 2.1e-82 310.1 324 51.5
HanXRQChr15g0495151 Helianthus annuus HOM05D006444 ORTHO05D007748 2.1e-82 310.1 338 50.3
PSO170G3086 Papaver somniferum HOM05D006444 ORTHO05D007748 8.8e-81 304.7 348 50.3
PSO357G0038 Papaver somniferum HOM05D006444 ORTHO05D007748 8.8e-81 304.7 348 50.6
Psat3g013840 Pisum sativum HOM05D006444 ORTHO05D007748 3.4e-80 302.8 263 57.0
SGA_v2.0_scaffold4G01962 Striga asiatica HOM05D006444 ORTHO05D007748 1.4e-78 297.4 330 50.9
Thecc.04G293900 Theobroma cacao HOM05D006444 ORTHO05D007748 2.4e-78 296.6 340 47.9
SalBow7G4019 Salvia bowleyana HOM05D006444 ORTHO05D007748 2.9e-76 289.7 317 51.1
Carub.0006s2458 Capsella rubella HOM05D006444 ORTHO05D007748 1.5e-75 287.3 329 48.6
CDE09G1197 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 6.1e-74 282.0 202 65.3
Sp2g21090 Schrenkiella parvula HOM05D006444 ORTHO05D007748 8.0e-74 281.6 323 49.2
Duzib151G0636 Durio zibethinus HOM05D006444 ORTHO05D007748 2.3e-73 280.0 339 47.5
Thhalv10004624m.g Eutrema salsugineum HOM05D006444 ORTHO05D007748 4.0e-73 279.3 330 47.6
Aa31LG11G9750 Aethionema arabicum HOM05D006444 ORTHO05D007748 5.2e-73 278.9 332 50.0
AT5G26940 Arabidopsis thaliana HOM05D006444 ORTHO05D007748 6.8e-73 278.5 323 49.2
CDE02G1332 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 1.2e-72 277.7 301 49.8
AL6G38850 Arabidopsis lyrata HOM05D006444 ORTHO05D007748 1.5e-72 277.3 324 50.0
A06p37110 Brassica napus HOM05D006444 ORTHO05D007748 2.0e-72 276.9 332 47.3
BraA06t26637Z Brassica rapa HOM05D006444 ORTHO05D007748 2.0e-72 276.9 332 47.3
CARHR186630 Cardamine hirsuta HOM05D006444 ORTHO05D007748 1.7e-71 273.9 328 47.3
BolC7t44660H Brassica oleracea HOM05D006444 ORTHO05D007748 6.3e-71 271.9 324 46.6
AUR62005256 Chenopodium quinoa HOM05D006444 ORTHO05D007748 1.4e-70 270.8 309 49.5
MBI19_g14287_MAGBIO Magnolia biondii HOM05D006444 ORTHO05D007748 5.4e-70 268.9 242 56.2
Ciclev10005435m.g Citrus clementina HOM05D006444 ORTHO05D007748 1.2e-69 267.7 333 47.7
Sc16g0008870 Simmondsia chinensis HOM05D006444 ORTHO05D007748 2.0e-69 266.9 277 53.1
AUR62000705 Chenopodium quinoa HOM05D006444 ORTHO05D007748 7.8e-69 265.0 309 48.9
unitig_46.g18373 Utricularia gibba HOM05D006444 ORTHO05D007748 6.6e-68 261.9 334 47.6
C07p41320 Brassica napus HOM05D006444 ORTHO05D007748 9.5e-67 258.1 350 44.0
HPP92_011867 Vanilla planifolia HOM05D006444 ORTHO05D007748 1.0e-65 254.6 274 49.3
Zm00001eb014130 Zea mays HOM05D006444 ORTHO05D007748 8.3e-63 245.0 311 47.3
Prupe.1G126500 Prunus persica HOM05D006444 ORTHO05D007748 1.4e-62 244.2 235 54.9
Os03g0301400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 2.3e-60 236.9 307 45.0
Hund21730 Selenicereus undatus HOM05D006444 ORTHO05D007748 2.3e-60 236.9 213 56.3
TAR362G0047 Trochodendron aralioides HOM05D006444 ORTHO05D007748 1.4e-57 227.6 204 59.8
MD13G1159900 Malus domestica HOM05D006444 ORTHO05D007748 4.0e-57 226.1 245 49.8
RcHm_v2.0_Chr4g0424201 Rosa chinensis HOM05D006444 ORTHO05D007748 1.5e-56 224.2 229 52.0
Actinidia35534 Actinidia chinensis HOM05D006444 ORTHO05D007748 3.7e-55 219.5 201 58.2
MD12G1208900 Malus domestica HOM05D006444 ORTHO05D007748 9.5e-51 204.9 193 59.6
AagrBONN_evm.TU.Sc2ySwM_344.4230 Anthoceros agrestis HOM05D006444 ORTHO05D007748 6.8e-49 198.7 209 46.9
Mapoly0162s0013 Marchantia polymorpha HOM05D006444 ORTHO05D007748 4.4e-48 196.1 199 49.2
Os04g0623400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 1.1e-46 191.4 208 48.1
FAN07G1328 Fragaria x ananassa HOM05D006444 ORTHO05D007748 8.6e-44 181.8 202 47.5
SEGI_10576 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 2.1e-42 177.2 158 53.8
FvH4_4g19220 Fragaria vesca HOM05D006444 ORTHO05D007748 6.8e-41 172.2 201 45.8
SMO116G0265 Selaginella moellendorffii HOM05D006444 ORTHO05D007748 3.4e-40 169.9 336 36.0
FAN12G0061 Fragaria x ananassa HOM05D006444 ORTHO05D007748 7.6e-40 168.7 201 46.3
FAN09G3591 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.7e-39 167.5 145 59.3
FAN12G3514 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.7e-37 160.2 201 44.3
Pp3c18_14120 Physcomitrium patens HOM05D001061 ORTHO05D007748 3.9e-36 156.4 257 35.4
Atru.chr4.2940 Acer truncatum HOM05D006444 ORTHO05D007748 8.7e-36 155.2 126 61.9
MD12G1209000 Malus domestica HOM05D006444 ORTHO05D007748 9.6e-35 151.8 137 54.0
MCO01G157 Micromonas commoda HOM05D005236 ORTHO05D006557 2.4e-25 120.6 203 39.4
EL10Ac4g09387 Beta vulgaris HOM05D006444 ORTHO05D007748 2.5e-19 100.5 86 66.3
Actinidia35535 Actinidia chinensis HOM05D006444 ORTHO05D007748 7.4e-19 99.0 87 59.8
Cre01.g021850 Chlamydomonas reinhardtii HOM05D005236 ORTHO05D006557 1.1e-11 75.1 178 33.1
SEGI_25648 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 7.2e-06 55.8 54 57.4


User provided reference genes

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