Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029441001 Vitis vinifera HOM05D000912 ORTHO05D011835 2.3e-51 205.3 105 100.0
Actinidia21902 Actinidia chinensis HOM05D000912 ORTHO05D001232 7.7e-31 137.1 95 68.4
Actinidia38823 Actinidia chinensis HOM05D000912 ORTHO05D001232 2.2e-30 135.6 95 68.4
CSS0005184 Camellia sinensis var. sinensis HOM05D000912 ORTHO05D001232 2.7e-28 128.6 95 65.3
Dinv20312 Davidia involucrata HOM05D000912 ORTHO05D001232 1.0e-27 126.7 95 63.2
Dinv37769 Davidia involucrata HOM05D000912 ORTHO05D001232 3.0e-27 125.2 97 62.9
Rhsim03G0000100 Rhododendron simsii HOM05D000912 ORTHO05D001232 1.7e-25 119.4 92 62.0
CSS0008849 Camellia sinensis var. sinensis HOM05D000912 ORTHO05D001232 2.8e-25 118.6 90 64.4
vmacro12581 Vaccinium macrocarpon HOM05D000912 ORTHO05D001232 1.4e-24 116.3 104 59.6
Rhsim08G0252700 Rhododendron simsii HOM05D000912 ORTHO05D001232 4.1e-24 114.8 94 61.7
Actinidia31119 Actinidia chinensis HOM05D000912 ORTHO05D001232 3.5e-23 111.7 95 56.8
Sc23g0006050 Simmondsia chinensis HOM05D000912 ORTHO05D001232 1.0e-22 110.2 95 56.8
vmacro21728 Vaccinium macrocarpon HOM05D000912 ORTHO05D001232 1.7e-22 109.4 95 57.9
TAR636G0354 Trochodendron aralioides HOM05D000912 ORTHO05D001232 2.2e-22 109.0 95 56.8
Peaxi162Scf00329g00813 Petunia axillaris HOM05D000912 ORTHO05D001232 8.5e-22 107.1 99 54.5
Nitab4.5_0010895g0020 Nicotiana tabacum HOM05D000912 ORTHO05D001232 1.9e-21 105.9 95 50.5
TAR626G1203 Trochodendron aralioides HOM05D000912 ORTHO05D001232 1.9e-21 105.9 95 52.6
TAR383G0774 Trochodendron aralioides HOM05D000912 ORTHO05D011835 3.2e-21 105.1 94 56.4
Hma1.2p1_0960F.1_g241630 Hydrangea macrophylla HOM05D000912 ORTHO05D001232 5.5e-21 104.4 95 55.8
Nitab4.5_0000129g0360 Nicotiana tabacum HOM05D000912 ORTHO05D001232 5.5e-21 104.4 95 50.5
MBI16_g40723_MAGBIO Magnolia biondii HOM05D000912 ORTHO05D001232 1.2e-20 103.2 95 57.9
Solyc01g008120.4 Solanum lycopersicum HOM05D000912 ORTHO05D001232 2.7e-20 102.1 95 55.8
Sopen01g003670 Solanum pennellii HOM05D000912 ORTHO05D001232 2.7e-20 102.1 95 55.8
CAN.G880.12 Capsicum annuum HOM05D000912 ORTHO05D001232 3.6e-20 101.7 97 50.5
CAN.G282.75 Capsicum annuum HOM05D000912 ORTHO05D001232 4.7e-20 101.3 99 53.5
ATR1125G026 Amborella trichopoda HOM05D000912 ORTHO05D001232 1.0e-19 100.1 95 51.6
Hund05659 Selenicereus undatus HOM05D000912 ORTHO05D001232 1.0e-19 100.1 95 51.6
Glyma.08G226700 Glycine max HOM05D000912 ORTHO05D001232 3.0e-19 98.6 97 55.7
Oeu054518.1 Olea europaea HOM05D000912 ORTHO05D001232 3.0e-19 98.6 95 53.7
SGA_v2.0_scaffold49G18366 Striga asiatica HOM05D000912 ORTHO05D001232 3.0e-19 98.6 95 50.5
Nitab4.5_0000069g0570 Nicotiana tabacum HOM05D000912 ORTHO05D001232 4.0e-19 98.2 95 52.6
Actinidia21666 Actinidia chinensis HOM05D000912 ORTHO05D011835 8.8e-19 97.1 70 64.3
MBI16_g43957_MAGBIO Magnolia biondii HOM05D000912 ORTHO05D011835 8.8e-19 97.1 92 57.6
FAN05G3420 Fragaria x ananassa HOM05D000912 ORTHO05D001232 1.2e-18 96.7 96 57.3
AUR62025681 Chenopodium quinoa HOM05D000912 ORTHO05D001232 1.5e-18 96.3 95 50.5
FAN09G3798 Fragaria x ananassa HOM05D000912 ORTHO05D001232 1.5e-18 96.3 96 56.2
Oeu027255.1 Olea europaea HOM05D000912 ORTHO05D001232 1.5e-18 96.3 95 48.4
Peaxi162Scf00097g01412 Petunia axillaris HOM05D000912 ORTHO05D001232 1.5e-18 96.3 103 48.5
EL10Ac7g18098 Beta vulgaris HOM05D000912 ORTHO05D001232 2.0e-18 95.9 95 50.5
AUR62001296 Chenopodium quinoa HOM05D000912 ORTHO05D001232 2.0e-18 95.9 95 50.5
FvH4_6g36320 Fragaria vesca HOM05D000912 ORTHO05D001232 2.0e-18 95.9 96 57.3
FAN02G2903 Fragaria x ananassa HOM05D000912 ORTHO05D001232 2.0e-18 95.9 96 56.2
Nitab4.5_0003699g0060 Nicotiana tabacum HOM05D000912 ORTHO05D001232 2.6e-18 95.5 95 54.7
MSTRG.6589 Avicennia marina HOM05D000912 ORTHO05D001232 3.4e-18 95.1 97 46.4
Phvul.010G165900 Phaseolus vulgaris HOM05D000912 ORTHO05D001232 3.4e-18 95.1 97 53.6
RcHm_v2.0_Chr2g0148331 Rosa chinensis HOM05D000912 ORTHO05D001232 3.4e-18 95.1 96 54.2
FAN14G0321 Fragaria x ananassa HOM05D000912 ORTHO05D001232 5.7e-18 94.4 96 56.2
FAN14G4043 Fragaria x ananassa HOM05D000912 ORTHO05D001232 5.7e-18 94.4 96 56.2
Lj3g0006194 Lotus japonicus HOM05D000912 ORTHO05D001232 5.7e-18 94.4 97 51.5
Glyma.07G000400 Glycine max HOM05D000912 ORTHO05D001232 9.8e-18 93.6 97 53.6
TPR.G38732 Trifolium pratense HOM05D000912 ORTHO05D001232 1.7e-17 92.8 97 52.6
Migut.M00129 Erythranthe guttata HOM05D000912 ORTHO05D001232 2.2e-17 92.4 95 48.4
Hma1.2p1_0108F.1_g051710 Hydrangea macrophylla HOM05D000912 ORTHO05D001232 2.2e-17 92.4 107 47.7
Ca_03788_v3 Cicer arietinum L. HOM05D000912 ORTHO05D001232 2.8e-17 92.0 97 49.5
Solyc04g008610.3 Solanum lycopersicum HOM05D000912 ORTHO05D001232 2.8e-17 92.0 98 45.9
Nn8g41285 Nelumbo nucifera HOM05D000912 ORTHO05D001232 3.7e-17 91.7 95 51.6
Prupe.3G028200 Prunus persica HOM05D000912 ORTHO05D001232 4.8e-17 91.3 96 52.1
arahy.Tifrunner.gnm1.ann1.PZ05LS Arachis hypogaea HOM05D000912 ORTHO05D001232 6.3e-17 90.9 97 51.5
ECA247G1226 Erigeron canadensis HOM05D000912 ORTHO05D001232 1.1e-16 90.1 94 52.1
Lalb_Chr19g0140521 Lupinus albus HOM05D000912 ORTHO05D001232 1.1e-16 90.1 95 49.5
MD09G1170000 Malus domestica HOM05D000912 ORTHO05D001232 1.4e-16 89.7 99 51.5
Aqoxy7G02531 Aquilegia oxysepala HOM05D000912 ORTHO05D001232 2.4e-16 89.0 91 51.6
arahy.Tifrunner.gnm1.ann1.DM6RAW Arachis hypogaea HOM05D000912 ORTHO05D001232 2.4e-16 89.0 97 50.5
SGA_v2.0_scaffold73G24406 Striga asiatica HOM05D000912 ORTHO05D001232 2.4e-16 89.0 94 47.9
Ah.08g218030 Amaranthus hybridus HOM05D000912 ORTHO05D001232 5.4e-16 87.8 96 45.8
Psat7g264600 Pisum sativum HOM05D000912 ORTHO05D001232 5.4e-16 87.8 98 45.9
CSS0006911 Camellia sinensis var. sinensis HOM05D000912 ORTHO05D001232 9.1e-16 87.0 172 33.1
CANSAT01G3172 Cannabis sativa HOM05D000912 ORTHO05D001232 9.1e-16 87.0 97 52.6
Oeu035306.2 Olea europaea HOM05D000912 ORTHO05D001232 2.0e-15 85.9 95 47.4
Lsat_1_v5_gn_4_131340 Lactuca sativa HOM05D000912 ORTHO05D001232 2.7e-15 85.5 92 46.7
HanXRQChr11g0326491 Helianthus annuus HOM05D000912 ORTHO05D001232 3.5e-15 85.1 94 46.8
Oeu061990.1 Olea europaea HOM05D000912 ORTHO05D001232 1.7e-14 82.8 95 46.3
HanXRQChr09g0266961 Helianthus annuus HOM05D000912 ORTHO05D001232 5.0e-14 81.3 94 44.7
Medtr7g105680 Medicago truncatula HOM05D023663 ORTHO05D011835 1.5e-13 79.7 96 45.8
ATR0598G184 Amborella trichopoda HOM05D000912 ORTHO05D001232 5.5e-13 77.8 95 48.4
PSO017G2537 Papaver somniferum HOM05D000912 ORTHO05D001232 7.2e-13 77.4 99 45.5
Duzib192G0163 Durio zibethinus HOM05D000912 ORTHO05D001232 2.1e-12 75.9 113 46.9
PSO170G3675 Papaver somniferum HOM05D000912 ORTHO05D001232 2.1e-12 75.9 99 44.4
SGA_v2.0_scaffold181G39745 Striga asiatica HOM05D000912 ORTHO05D001232 2.1e-12 75.9 95 43.2
Oeu011002.1 Olea europaea HOM05D000912 ORTHO05D001232 3.6e-12 75.1 95 46.3
CiPaw.02G050600 Carya illinoinensis HOM05D000912 ORTHO05D001232 4.7e-12 74.7 101 50.5
unitig_62.g23240 Utricularia gibba HOM05D000912 ORTHO05D001232 4.7e-12 74.7 103 41.7
Cpa.g.sc10.17 Carica papaya HOM05D000912 ORTHO05D001232 1.4e-11 73.2 112 43.8
Thhalv10006544m.g Eutrema salsugineum HOM05D000912 ORTHO05D001232 1.4e-11 73.2 97 45.4
Cfa002158 Carpinus fangiana HOM05D000912 ORTHO05D001232 1.8e-11 72.8 104 49.0
CiPaw.02G051600 Carya illinoinensis HOM05D000912 ORTHO05D001232 1.8e-11 72.8 99 49.5
Gohir.A05G116900 Gossypium hirsutum HOM05D000912 ORTHO05D001232 1.8e-11 72.8 111 44.1
Ciclev10027674m.g Citrus clementina HOM05D000912 ORTHO05D001232 2.3e-11 72.4 115 42.6
Gohir.D05G117800 Gossypium hirsutum HOM05D000912 ORTHO05D001232 2.3e-11 72.4 111 44.1
Gorai.009G121700 Gossypium raimondii HOM05D000912 ORTHO05D001232 2.3e-11 72.4 111 44.1
Phvul.005G082300 Phaseolus vulgaris HOM05D000912 ORTHO05D001232 4.0e-11 71.6 96 44.8
Atru.chr3.4082 Acer truncatum HOM05D000912 ORTHO05D001232 5.2e-11 71.2 112 42.0
Gohir.A10G000900 Gossypium hirsutum HOM05D000912 ORTHO05D001232 5.2e-11 71.2 112 44.6
Nn2g12790 Nelumbo nucifera HOM05D000912 ORTHO05D001232 5.2e-11 71.2 83 47.0
Ah.15g094210 Amaranthus hybridus HOM05D000912 ORTHO05D001232 6.8e-11 70.9 83 41.0
Lsat_1_v5_gn_1_24881 Lactuca sativa HOM05D000912 ORTHO05D001232 6.8e-11 70.9 95 46.3
PGR102G0551 Punica granatum HOM05D000912 ORTHO05D001232 6.8e-11 70.9 101 41.6
Hund18548 Selenicereus undatus HOM05D000912 ORTHO05D001232 6.8e-11 70.9 90 42.2
Medtr4g005050 Medicago truncatula HOM05D000912 ORTHO05D001232 1.2e-10 70.1 91 44.0
Medtr7g105660 Medicago truncatula HOM05D000912 ORTHO05D011835 1.2e-10 70.1 96 40.6
Lsat_1_v5_gn_4_129780 Lactuca sativa HOM05D000912 ORTHO05D011835 1.5e-10 69.7 103 38.8
Manes.14G000700 Manihot esculenta HOM05D000912 ORTHO05D001232 1.5e-10 69.7 102 44.1
Thecc.06G049100 Theobroma cacao HOM05D000912 ORTHO05D001232 2.6e-10 68.9 113 41.6
Eucgr.E00932 Eucalyptus grandis HOM05D000912 ORTHO05D011835 3.4e-10 68.6 96 41.7
Eucgr.F04065 Eucalyptus grandis HOM05D000912 ORTHO05D011835 3.4e-10 68.6 98 42.9
Manes.14G000600 Manihot esculenta HOM05D000912 ORTHO05D001232 3.4e-10 68.6 104 45.2
Aa31LG4G1980 Aethionema arabicum HOM05D000912 ORTHO05D001232 5.7e-10 67.8 116 43.1
Aqoxy7G02557 Aquilegia oxysepala HOM05D000912 ORTHO05D001232 5.7e-10 67.8 96 46.9
DCAR_013192 Daucus carota HOM05D000912 ORTHO05D001232 5.7e-10 67.8 89 44.9
Eucgr.E00712 Eucalyptus grandis HOM05D000912 ORTHO05D011835 5.7e-10 67.8 96 41.7
TWI12G0824 Tripterygium wilfordii HOM05D000912 ORTHO05D001232 5.7e-10 67.8 108 37.0
THA.LOC104813621 Tarenaya hassleriana HOM05D000912 ORTHO05D001232 7.5e-10 67.4 111 44.1
TWI18G1361 Tripterygium wilfordii HOM05D000912 ORTHO05D001232 7.5e-10 67.4 105 37.1
Gohir.D06G118100 Gossypium hirsutum HOM05D000912 ORTHO05D001232 9.8e-10 67.0 113 41.6
Gorai.010G135700 Gossypium raimondii HOM05D000912 ORTHO05D001232 9.8e-10 67.0 113 41.6
Duzib235G0834 Durio zibethinus HOM05D000912 ORTHO05D001232 1.3e-09 66.6 112 41.1
Lsat_1_v5_gn_6_111241 Lactuca sativa HOM05D000912 ORTHO05D001232 1.3e-09 66.6 102 41.2
Sopen04g003770 Solanum pennellii HOM05D000912 ORTHO05D001232 1.3e-09 66.6 98 36.7
unitig_0.g720 Utricularia gibba HOM05D000912 ORTHO05D001232 1.3e-09 66.6 98 37.8
CARHR017170 Cardamine hirsuta HOM05D000912 ORTHO05D001232 1.7e-09 66.2 113 42.5
Gohir.A06G182500 Gossypium hirsutum HOM05D000912 ORTHO05D001232 1.7e-09 66.2 107 44.9
Gorai.010G222100 Gossypium raimondii HOM05D000912 ORTHO05D001232 2.2e-09 65.9 107 43.9
Cc11_g00260 Coffea canephora HOM05D000912 ORTHO05D001232 2.8e-09 65.5 121 33.1
THA.LOC104812346 Tarenaya hassleriana HOM05D000912 ORTHO05D001232 2.8e-09 65.5 117 40.2
VMungo1080G1388 Vigna mungo HOM05D000912 ORTHO05D001232 2.8e-09 65.5 96 42.7
AL1G28880 Arabidopsis lyrata HOM05D000912 ORTHO05D001232 3.7e-09 65.1 117 41.0
Gohir.D06G189400 Gossypium hirsutum HOM05D000912 ORTHO05D001232 6.3e-09 64.3 107 43.0
BcaB03g13036 Brassica carinata HOM05D000912 ORTHO05D001232 1.1e-08 63.5 101 41.6
ECA246G3011 Erigeron canadensis HOM05D000912 ORTHO05D001232 1.1e-08 63.5 93 40.9
TWI75G1589 Tripterygium wilfordii HOM05D000912 ORTHO05D001232 1.1e-08 63.5 107 35.5
A02p22450 Brassica napus HOM05D000912 ORTHO05D001232 1.4e-08 63.2 109 38.5
Carub.0001s1645 Capsella rubella HOM05D000912 ORTHO05D001232 1.4e-08 63.2 112 37.5
Migut.H01257 Erythranthe guttata HOM05D000912 ORTHO05D001232 1.4e-08 63.2 95 35.8
Potri.014G000500 Populus trichocarpa HOM05D000912 ORTHO05D001232 1.4e-08 63.2 100 43.0
AL2G39460 Arabidopsis lyrata HOM05D000912 ORTHO05D001232 1.8e-08 62.8 107 42.1
AT1G16710 Arabidopsis thaliana HOM05D000912 ORTHO05D001232 2.4e-08 62.4 119 40.3
AT1G79000 Arabidopsis thaliana HOM05D000912 ORTHO05D001232 2.4e-08 62.4 112 39.3
BcaC07g38809 Brassica carinata HOM05D000912 ORTHO05D001232 2.4e-08 62.4 98 37.8
Sabra14G0003100 Salix brachista HOM05D000912 ORTHO05D001232 2.4e-08 62.4 108 42.6
BraA02t07249Z Brassica rapa HOM05D000912 ORTHO05D001232 3.1e-08 62.0 107 39.3
THA.LOC104808111 Tarenaya hassleriana HOM05D000912 ORTHO05D001232 3.1e-08 62.0 111 41.4
A07p44140 Brassica napus HOM05D000912 ORTHO05D001232 4.1e-08 61.6 107 43.0
A08p31320 Brassica napus HOM05D000912 ORTHO05D001232 4.1e-08 61.6 98 37.8
C02p36130 Brassica napus HOM05D000912 ORTHO05D001232 4.1e-08 61.6 104 41.3
BraA07t31922Z Brassica rapa HOM05D000912 ORTHO05D001232 4.1e-08 61.6 107 43.0
BraA08t35055Z Brassica rapa HOM05D000912 ORTHO05D001232 4.1e-08 61.6 98 37.8
Carub.0002s2587 Capsella rubella HOM05D000912 ORTHO05D001232 4.1e-08 61.6 107 40.2
Eucgr.E00691 Eucalyptus grandis HOM05D000912 ORTHO05D011835 4.1e-08 61.6 94 41.5
Sp5g34050 Schrenkiella parvula HOM05D000912 ORTHO05D001232 4.1e-08 61.6 108 41.7
BcaC03g15858 Brassica carinata HOM05D000912 ORTHO05D001232 7.0e-08 60.8 103 41.7
BcaC07g41460 Brassica carinata HOM05D000912 ORTHO05D001232 7.0e-08 60.8 108 41.7
A09p60770 Brassica napus HOM05D000912 ORTHO05D001232 7.0e-08 60.8 103 43.7
C08p17500 Brassica napus HOM05D000912 ORTHO05D001232 7.0e-08 60.8 98 36.7
BolC2t09626H Brassica oleracea HOM05D000912 ORTHO05D001232 7.0e-08 60.8 103 41.7
BolC8t51978H Brassica oleracea HOM05D000912 ORTHO05D001232 7.0e-08 60.8 108 41.7
BraA09t41450Z Brassica rapa HOM05D000912 ORTHO05D001232 7.0e-08 60.8 103 43.7
Thhalv10018000m.g Eutrema salsugineum HOM05D000912 ORTHO05D001232 7.0e-08 60.8 104 38.5
Sabra07G0002500 Salix brachista HOM05D000912 ORTHO05D001232 7.0e-08 60.8 95 42.1
CARHR072670 Cardamine hirsuta HOM05D000912 ORTHO05D001232 9.2e-08 60.5 108 39.8
SEGI_26914 Sequoiadendron giganteum HOM05D000912 ORTHO05D001217 9.2e-08 60.5 95 40.0
C08p44350 Brassica napus HOM05D000912 ORTHO05D001232 1.2e-07 60.1 110 40.9
HanXRQChr05g0150621 Helianthus annuus HOM05D000912 ORTHO05D001232 1.2e-07 60.1 94 41.5
BcaC07g38808 Brassica carinata HOM05D000912 ORTHO05D012941 2.0e-07 59.3 108 38.9
SEGI_27102 Sequoiadendron giganteum HOM05D000912 ORTHO05D001232 2.0e-07 59.3 81 43.2
BcaC08g47464 Brassica carinata HOM05D000912 ORTHO05D001232 3.5e-07 58.5 114 40.4
Sp1g14860 Schrenkiella parvula HOM05D000912 ORTHO05D001232 4.5e-07 58.2 124 37.1
BolC6t40305H Brassica oleracea HOM05D000912 ORTHO05D001232 5.9e-07 57.8 112 40.2
BolC8t49377H Brassica oleracea HOM05D000912 ORTHO05D001232 7.7e-07 57.4 93 38.7
ECA232G2502 Erigeron canadensis HOM05D000912 ORTHO05D001232 1.0e-06 57.0 80 37.5
C06p52870 Brassica napus HOM05D000912 ORTHO05D001232 1.3e-06 56.6 115 39.1
Sed0017344 Sechium edule HOM05D000912 ORTHO05D001232 1.3e-06 56.6 60 48.3
SEGI_29442 Sequoiadendron giganteum HOM05D000912 ORTHO05D001232 1.3e-06 56.6 93 41.9
DCAR_011706 Daucus carota HOM05D000912 ORTHO05D001232 1.7e-06 56.2 103 37.9
Migut.M00418 Erythranthe guttata HOM05D000912 ORTHO05D011835 1.7e-06 56.2 83 34.9
Lalb_Chr04g0264771 Lupinus albus HOM05D000912 ORTHO05D001232 1.7e-06 56.2 62 43.5
ECA246G2333 Erigeron canadensis HOM05D000912 ORTHO05D010420 2.9e-06 55.5 56 50.0
CsaV3_3G000040 Cucumis sativus L. HOM05D000912 ORTHO05D001232 3.8e-06 55.1 58 48.3
Actinidia00648 Actinidia chinensis HOM05D000912 ORTHO05D001232 6.6e-06 54.3 56 48.2
Potri.007G003301 Populus trichocarpa HOM05D000912 ORTHO05D011835 6.6e-06 54.3 92 38.0
SHI05865 Sapria himalayana HOM05D000912 ORTHO05D011835 6.6e-06 54.3 108 38.0
ClCG10G000030 Citrullus lanatus HOM05D000912 ORTHO05D001232 8.6e-06 53.9 57 47.4
Potri.019G036800 Populus trichocarpa HOM05D000912 ORTHO05D011835 8.6e-06 53.9 92 38.0


User provided reference genes

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