Gene: Carub.0001s1645

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0001s1645
  • Transcript Identifier Carub.0001s1645.1
  • Gene Type Coding gene
  • Location scaffold_1 : 5778004-5785368 : positive

Gene Family Information

  • ID HOM05D000912
  • #Genes/#Species 657/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0001s1645.v1.1
  • pacid 39230468
  • synonym Carubv10008082m.g

Descriptions

  • Description PF00569//PF00628//PF02135//PF08214 - Zinc finger, ZZ type (ZZ) // PHD-finger (PHD) // TAZ zinc finger (zf-TAZ) // Histone acetylation protein (HAT_KAT11)
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0016573
IEA
InterProhistone acetylation
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT1G16710
GO:0006473
ISO
PLAZA Integrative Orthologyprotein acetylation AT1G16710

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004402
IEA
InterProhistone acetyltransferase activity
GO:0008270
IEA
InterProzinc ion binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013178 Histone acetyltransferase Rtt109/CBP
IPR043145 Zinc finger, ZZ-type superfamily
IPR035898 TAZ domain superfamily
IPR011011 Zinc finger, FYVE/PHD-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR000197 Zinc finger, TAZ-type
IPR038547 CBP/p300, atypical RING domain superfamily
IPR000433 Zinc finger, ZZ-type
IPR019787 Zinc finger, PHD-finger
Mapman id Description
12.3.1.2 Chromatin organisation.post-translational histone modification.histone acetylation.histone acetyltransferase (HAC/HPCAT)