Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01023145001 Vitis vinifera HOM05D005817 ORTHO05D007140 3.7e-143 511.5 261 100.0
Hma1.2p1_0052F.1_g030020 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 1.7e-108 396.4 258 80.6
TAR376G0556 Trochodendron aralioides HOM05D005817 ORTHO05D007140 1.5e-107 393.3 256 80.5
TAR628G1209 Trochodendron aralioides HOM05D005817 ORTHO05D007140 9.6e-107 390.6 256 80.9
MBI06_g16620_MAGBIO Magnolia biondii HOM05D005817 ORTHO05D007140 3.6e-106 388.7 256 78.5
Dinv29679 Davidia involucrata HOM05D005817 ORTHO05D007140 1.4e-105 386.7 257 79.0
Nn5g27184 Nelumbo nucifera HOM05D005817 ORTHO05D007140 1.2e-104 383.6 255 78.4
Aqoxy6G00025 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 2.0e-104 382.9 256 77.3
Prupe.1G585700 Prunus persica HOM05D005817 ORTHO05D007140 5.8e-104 381.3 255 78.4
RcHm_v2.0_Chr7g0219661 Rosa chinensis HOM05D005817 ORTHO05D007140 7.6e-104 380.9 255 79.6
CSS0044256 Camellia sinensis var. sinensis HOM05D005817 ORTHO05D007140 1.3e-103 380.2 255 77.3
CsaV3_5G027420 Cucumis sativus L. HOM05D005817 ORTHO05D007140 1.3e-103 380.2 255 77.6
QL02p103359 Quercus lobata HOM05D005817 ORTHO05D007140 6.4e-103 377.9 255 78.0
PSO017G5300 Papaver somniferum HOM05D005817 ORTHO05D007140 1.4e-102 376.7 256 74.6
MD08G1248300 Malus domestica HOM05D005817 ORTHO05D007140 1.9e-102 376.3 255 76.9
Sabra01G0174300 Salix brachista HOM05D005817 ORTHO05D007140 4.2e-102 375.2 260 75.4
Thecc.06G019900 Theobroma cacao HOM05D005817 ORTHO05D007140 4.2e-102 375.2 254 77.2
PSO170G5162 Papaver somniferum HOM05D005817 ORTHO05D007140 9.3e-102 374.0 256 73.8
Actinidia01635 Actinidia chinensis HOM05D005817 ORTHO05D007140 1.2e-101 373.6 256 77.7
MD15G1443200 Malus domestica HOM05D005817 ORTHO05D007140 1.2e-101 373.6 260 76.5
Potri.004G229200 Populus trichocarpa HOM05D005817 ORTHO05D007140 2.7e-101 372.5 256 76.6
Lalb_Chr07g0176811 Lupinus albus HOM05D005817 ORTHO05D007140 3.5e-101 372.1 256 75.0
Gohir.A06G115800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 1.0e-100 370.5 254 76.4
Lj9C259G5 Lonicera japonica HOM05D001465 ORTHO05D001434 1.3e-100 370.2 258 75.6
Ciclev10002025m.g Citrus clementina HOM05D005817 ORTHO05D007140 1.8e-100 369.8 256 77.3
Cc02_g23610 Coffea canephora HOM05D005817 ORTHO05D007140 2.3e-100 369.4 257 77.0
Psat4g000960 Pisum sativum HOM05D005817 ORTHO05D007140 3.0e-100 369.0 256 76.6
Ca_13529_v3 Cicer arietinum L. HOM05D005817 ORTHO05D007140 5.1e-100 368.2 256 76.6
FvH4_5g27830 Fragaria vesca HOM05D005817 ORTHO05D007140 5.1e-100 368.2 256 76.2
FAN18G1253 Fragaria x ananassa HOM05D005817 ORTHO05D007140 5.1e-100 368.2 256 76.2
Gohir.D06G122800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 5.1e-100 368.2 254 76.4
Oeu028475.1 Olea europaea HOM05D005817 ORTHO05D007140 8.7e-100 367.5 256 74.6
COL.COLO4_31118 Corchorus olitorius HOM05D005817 ORTHO05D007140 1.1e-99 367.1 253 76.3
Manes.10G106400 Manihot esculenta HOM05D005817 ORTHO05D007140 1.1e-99 367.1 256 76.6
Rhsim05G0115500 Rhododendron simsii HOM05D005817 ORTHO05D007140 1.1e-99 367.1 256 75.8
Gorai.010G142900 Gossypium raimondii HOM05D005817 ORTHO05D007140 1.5e-99 366.7 254 76.0
Lj4g0018327 Lotus japonicus HOM05D005817 ORTHO05D007140 1.5e-99 366.7 256 75.0
Glyma.17G001900 Glycine max HOM05D005817 ORTHO05D007140 1.9e-99 366.3 257 76.7
Manes.07G030600 Manihot esculenta HOM05D005817 ORTHO05D007140 1.9e-99 366.3 257 75.1
CANSAT01G0715 Cannabis sativa HOM05D005817 ORTHO05D007140 2.5e-99 365.9 257 75.9
Atru.chr6.226 Acer truncatum HOM05D005817 ORTHO05D007140 3.3e-99 365.5 256 76.6
CiPaw.06G176700 Carya illinoinensis HOM05D005817 ORTHO05D007140 3.3e-99 365.5 256 76.2
CDE07G1199 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 3.3e-99 365.5 255 74.9
Oeu028476.1 Olea europaea HOM05D005817 ORTHO05D007140 3.3e-99 365.5 256 74.2
vmacro19830 Vaccinium macrocarpon HOM05D005817 ORTHO05D007140 3.3e-99 365.5 256 75.8
Duzib160G0844 Durio zibethinus HOM05D005817 ORTHO05D007140 4.3e-99 365.2 256 75.8
Phvul.003G075900 Phaseolus vulgaris HOM05D005817 ORTHO05D007140 9.6e-99 364.0 256 76.2
Sed0006174 Sechium edule HOM05D005817 ORTHO05D007140 9.6e-99 364.0 255 74.1
TPR.G6004 Trifolium pratense HOM05D005817 ORTHO05D007140 9.6e-99 364.0 256 75.4
TWI14G0757 Tripterygium wilfordii HOM05D005817 ORTHO05D007140 1.6e-98 363.2 254 76.4
Haze_09983 Corylus avellana HOM05D005817 ORTHO05D007140 2.1e-98 362.8 257 73.5
Nitab4.5_0007689g0010 Nicotiana tabacum HOM05D005817 ORTHO05D007140 4.8e-98 361.7 256 74.2
EL10Ac6g13990 Beta vulgaris HOM05D005817 ORTHO05D007140 8.1e-98 360.9 256 71.1
ATR1089G128 Amborella trichopoda HOM05D005817 ORTHO05D007140 1.1e-97 360.5 258 74.4
Glyma.07G272500 Glycine max HOM05D005817 ORTHO05D007140 2.4e-97 359.4 256 75.4
Eucgr.I02797 Eucalyptus grandis HOM05D005817 ORTHO05D007140 9.0e-97 357.5 255 74.5
Medtr4g134630 Medicago truncatula HOM05D005817 ORTHO05D007140 9.0e-97 357.5 256 72.7
arahy.Tifrunner.gnm1.ann1.NEQE4P Arachis hypogaea HOM05D005817 ORTHO05D007140 3.4e-96 355.5 274 70.8
Hund15375 Selenicereus undatus HOM05D005817 ORTHO05D007140 3.4e-96 355.5 254 73.6
AUR62043876 Chenopodium quinoa HOM05D005817 ORTHO05D007140 4.5e-96 355.1 258 71.3
arahy.Tifrunner.gnm1.ann1.86KQ48 Arachis hypogaea HOM05D005817 ORTHO05D007140 7.6e-96 354.4 274 70.4
PGR142G3472 Punica granatum HOM05D005817 ORTHO05D007140 4.9e-95 351.7 255 71.8
Solyc01g103020.4 Solanum lycopersicum HOM05D005817 ORTHO05D007140 1.4e-94 350.1 255 72.5
CAN.G855.54 Capsicum annuum HOM05D005817 ORTHO05D007140 3.2e-94 349.0 256 73.8
PGSC0003DMG400020713 Solanum tuberosum HOM05D005817 ORTHO05D007140 7.1e-94 347.8 256 72.3
HanXRQChr15g0469671 Helianthus annuus HOM05D005817 ORTHO05D007140 1.2e-93 347.1 262 73.7
CDE08G0344 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.6e-93 346.7 255 72.2
THA.LOC104824089 Tarenaya hassleriana HOM05D005817 ORTHO05D007140 2.1e-93 346.3 254 71.3
AUR62032450 Chenopodium quinoa HOM05D005817 ORTHO05D007140 6.0e-93 344.7 286 64.3
Lsat_1_v5_gn_9_83341 Lactuca sativa HOM05D005817 ORTHO05D007140 1.8e-92 343.2 260 72.3
Sp2g13800 Schrenkiella parvula HOM05D005817 ORTHO05D007140 1.8e-92 343.2 254 71.3
Peaxi162Scf00011g01920 Petunia axillaris HOM05D005817 ORTHO05D007140 5.1e-92 341.7 317 60.6
Sc03g0006230 Simmondsia chinensis HOM05D005817 ORTHO05D007140 5.1e-92 341.7 213 80.3
VMungo1215G1434 Vigna mungo HOM05D005817 ORTHO05D007140 6.7e-92 341.3 209 82.8
Os08g0109900 Oryza sativa ssp. japonica HOM05D005817 ORTHO05D007140 8.7e-92 340.9 256 71.5
Migut.N00865 Erythranthe guttata HOM05D005817 ORTHO05D007140 1.5e-91 340.1 258 71.3
Thhalv10004677m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 4.3e-91 338.6 254 70.1
Ah.03g136770 Amaranthus hybridus HOM05D005817 ORTHO05D007140 5.7e-91 338.2 278 65.1
AT2G02570 Arabidopsis thaliana HOM05D005817 ORTHO05D007140 1.6e-90 336.7 256 68.0
FAN04G1604 Fragaria x ananassa HOM05D005817 ORTHO05D007140 1.6e-90 336.7 324 59.9
SGA_v2.0_scaffold8G04460 Striga asiatica HOM05D005817 ORTHO05D007140 1.6e-90 336.7 255 70.6
Lj5C284T7 Lonicera japonica HOM05D005817 ORTHO05D007140 4.8e-90 335.1 208 82.7
AL5G11840 Arabidopsis lyrata HOM05D005817 ORTHO05D007140 6.3e-90 334.7 254 68.1
Carub.0005s0157 Capsella rubella HOM05D005817 ORTHO05D007140 8.2e-90 334.3 254 68.9
Sopen01g045430 Solanum pennellii HOM05D005817 ORTHO05D007140 1.8e-89 333.2 232 73.7
C07p33290 Brassica napus HOM05D005817 ORTHO05D007140 1.5e-88 330.1 249 69.5
BolC7t43840H Brassica oleracea HOM05D005817 ORTHO05D007140 1.5e-88 330.1 249 69.5
BcaC06g31224 Brassica carinata HOM05D005817 ORTHO05D007140 5.9e-88 328.2 249 70.7
BraA06t27241Z Brassica rapa HOM05D005817 ORTHO05D007140 7.6e-88 327.8 250 69.6
Aa31LG2G7570 Aethionema arabicum HOM05D005817 ORTHO05D007140 1.3e-87 327.0 241 70.1
A06p43560 Brassica napus HOM05D005817 ORTHO05D007140 1.7e-87 326.6 249 69.9
BcaC03g17157 Brassica carinata HOM05D005817 ORTHO05D007140 6.5e-87 324.7 254 67.7
A02p33050 Brassica napus HOM05D005817 ORTHO05D007140 1.4e-86 323.6 257 67.3
SHI04993 Sapria himalayana HOM05D005817 ORTHO05D007140 3.2e-86 322.4 215 74.4
ClCG11G000310 Citrullus lanatus HOM05D005817 ORTHO05D007140 7.2e-86 321.2 256 69.1
Mapoly0107s0026 Marchantia polymorpha HOM05D005817 ORTHO05D007140 4.3e-83 312.0 263 63.9
C02p50820 Brassica napus HOM05D005817 ORTHO05D007140 5.7e-83 311.6 257 66.5
unitig_22.g6849 Utricularia gibba HOM05D005817 ORTHO05D007140 1.6e-82 310.1 256 66.4
ECA236G3641 Erigeron canadensis HOM05D000284 ORTHO05D000805 2.8e-82 309.3 257 68.5
BolC2t11164H Brassica oleracea HOM05D005817 ORTHO05D007140 1.4e-81 307.0 258 65.5
Hma1.2p1_0052F.1_g030010 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 1.2e-80 303.9 185 84.9
FAN08G2336 Fragaria x ananassa HOM05D005817 ORTHO05D007140 1.9e-78 296.6 325 55.7
SMO117G0163 Selaginella moellendorffii HOM05D005817 ORTHO05D007140 1.8e-73 280.0 191 70.7
Aqoxy385s001 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 1.5e-72 276.9 255 62.4
Pp3c10_3580 Physcomitrium patens HOM05D005817 ORTHO05D007140 5.9e-72 275.0 287 54.4
BraA02t08326Z Brassica rapa HOM05D005817 ORTHO05D007140 7.7e-72 274.6 223 66.8
Actinidia26194 Actinidia chinensis HOM05D005817 ORTHO05D007140 1.0e-71 274.2 270 62.6
Pp3c10_3582 Physcomitrium patens HOM05D005817 ORTHO05D007140 1.4e-70 270.4 247 58.3
Lalb_Chr12g0195861 Lupinus albus HOM05D005817 ORTHO05D007140 9.4e-70 267.7 165 83.0
AagrBONN_evm.TU.Sc2ySwM_117.207 Anthoceros agrestis HOM05D005817 ORTHO05D007140 1.2e-69 267.3 260 56.9
CDE04G1950 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 3.6e-69 265.8 211 67.3
Nitab4.5_0003247g0070 Nicotiana tabacum HOM05D005817 ORTHO05D007140 3.6e-69 265.8 203 72.4
Duzib235G1547 Durio zibethinus HOM05D005817 ORTHO05D007140 1.0e-68 264.2 202 71.8
Pp3c1_22040 Physcomitrium patens HOM05D005817 ORTHO05D007140 5.1e-68 261.9 280 54.3
RcHm_v2.0_Chr5g0068831 Rosa chinensis HOM05D005817 ORTHO05D007140 1.3e-66 257.3 154 87.7
Cpa.g.sc173.14 Carica papaya HOM05D005817 ORTHO05D007140 1.8e-65 253.4 158 80.4
CDE02G1227 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 5.9e-64 248.4 255 56.1
HPP92_002041 Vanilla planifolia HOM05D005817 ORTHO05D007140 4.2e-62 242.3 213 63.4
CBR_g40810 Chara braunii HOM05D005817 ORTHO05D007140 1.4e-60 237.3 220 58.6
Pp3c14_9240 Physcomitrium patens HOM05D005817 ORTHO05D007140 1.5e-54 217.2 251 50.6
MSTRG.27880 Avicennia marina HOM05D005817 ORTHO05D007140 5.5e-54 215.3 184 65.2
Zm00001eb174130 Zea mays HOM05D005817 ORTHO05D007140 3.6e-53 212.6 129 84.5
MSTRG.601 Avicennia marina HOM05D005817 ORTHO05D007140 1.3e-42 177.6 162 63.0
Dinv29634 Davidia involucrata HOM05D005817 ORTHO05D007140 9.5e-38 161.4 109 72.5
Cre02.g106550 Chlamydomonas reinhardtii HOM05D005817 ORTHO05D007140 6.0e-24 115.5 190 37.4
VMungo0766G0001 Vigna mungo HOM05D005817 ORTHO05D007140 4.3e-22 109.4 99 60.6
MCO12G229 Micromonas commoda HOM05D005817 ORTHO05D007140 3.7e-18 96.3 206 31.1
PRCOL_00002712 Prasinoderma coloniale HOM05D005817 ORTHO05D007140 5.4e-17 92.4 195 36.9
SEGI_07435 Sequoiadendron giganteum HOM05D005817 ORTHO05D007140 1.6e-16 90.9 99 48.5
Thhalv10005196m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 1.2e-11 74.7 52 75.0
COL.COLO4_38165 Corchorus olitorius HOM05D011921 ORTHO05D160408 4.4e-11 72.8 180 37.8
FvH4_3g40414 Fragaria vesca HOM05D005817 ORTHO05D007140 4.4e-11 72.8 57 61.4
CDE04G0373 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 4.1e-09 66.2 45 75.6
CARHR145100 Cardamine hirsuta HOM05D005817 ORTHO05D007140 1.0e-07 61.6 77 50.6


User provided reference genes

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