Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01021083001 Vitis vinifera HOM05D005621 ORTHO05D007248 2.4e-134 482.3 254 100.0
Dinv40577 Davidia involucrata HOM05D005621 ORTHO05D007248 4.1e-78 295.4 235 69.4
TAR624G0986 Trochodendron aralioides HOM05D005621 ORTHO05D007248 7.7e-77 291.2 242 67.8
Nn1g06478 Nelumbo nucifera HOM05D005621 ORTHO05D007248 2.9e-76 289.3 237 67.1
Potri.004G045700 Populus trichocarpa HOM05D005621 ORTHO05D007248 9.4e-75 284.3 229 65.1
Manes.16G029300 Manihot esculenta HOM05D005621 ORTHO05D007248 4.7e-74 282.0 226 67.7
PSO541G5241 Papaver somniferum HOM05D005621 ORTHO05D007248 1.8e-73 280.0 240 65.4
PSO675G9131 Papaver somniferum HOM05D005621 ORTHO05D007248 1.8e-73 280.0 240 65.4
Hma1.2p1_0208F.1_g088250 Hydrangea macrophylla HOM05D005621 ORTHO05D007248 6.8e-73 278.1 240 67.1
Lsat_1_v5_gn_7_21701 Lactuca sativa HOM05D005621 ORTHO05D007248 6.8e-73 278.1 227 67.8
MELO3C007277.2 Cucumis melo HOM05D005621 ORTHO05D007248 1.2e-72 277.3 225 67.1
Dinv17326 Davidia involucrata HOM05D005621 ORTHO05D007248 1.2e-72 277.3 233 67.4
Cfa000493 Carpinus fangiana HOM05D005621 ORTHO05D007248 1.5e-72 276.9 250 62.8
Glyma.07G198500 Glycine max HOM05D005621 ORTHO05D007248 1.5e-72 276.9 221 68.3
Gorai.010G256400 Gossypium raimondii HOM05D005621 ORTHO05D007248 1.5e-72 276.9 221 68.3
Thecc.06G184600 Theobroma cacao HOM05D005621 ORTHO05D007248 3.4e-72 275.8 199 73.9
Sabra04G0028500 Salix brachista HOM05D005621 ORTHO05D007248 5.7e-72 275.0 229 64.2
Gohir.A06G211100 Gossypium hirsutum HOM05D005621 ORTHO05D007248 7.5e-72 274.6 222 68.5
CiPaw.09G061400 Carya illinoinensis HOM05D005621 ORTHO05D007248 1.3e-71 273.9 229 65.9
Gohir.D06G210100 Gossypium hirsutum HOM05D005621 ORTHO05D007248 1.3e-71 273.9 173 80.3
CDE02G0355 Ceratophyllum demersum HOM05D005621 ORTHO05D007248 2.8e-71 272.7 237 65.4
CsaV3_6G050190 Cucumis sativus L. HOM05D005621 ORTHO05D007248 2.8e-71 272.7 230 64.8
CANSAT35G1861 Cannabis sativa HOM05D005621 ORTHO05D007248 6.3e-71 271.6 228 65.8
Haze_06422 Corylus avellana HOM05D005621 ORTHO05D007248 6.3e-71 271.6 232 65.5
MSTRG.14706 Avicennia marina HOM05D005621 ORTHO05D007248 8.3e-71 271.2 230 67.4
ClCG01G023060 Citrullus lanatus HOM05D005621 ORTHO05D007248 1.4e-70 270.4 229 65.9
Sed0019345 Sechium edule HOM05D005621 ORTHO05D007248 4.1e-70 268.9 222 63.5
CDE05G0202 Ceratophyllum demersum HOM05D005621 ORTHO05D007248 5.4e-70 268.5 225 64.4
Lj4g0015429 Lotus japonicus HOM05D005621 ORTHO05D007248 7.0e-70 268.1 234 65.8
Lalb_Chr09g0327691 Lupinus albus HOM05D005621 ORTHO05D007248 7.0e-70 268.1 222 67.1
Gohir.D05G163500 Gossypium hirsutum HOM05D005621 ORTHO05D007248 9.1e-70 267.7 229 65.9
Cpa.g.sc464.3 Carica papaya HOM05D005621 ORTHO05D007248 1.6e-69 266.9 228 65.4
Lalb_Chr16g0383871 Lupinus albus HOM05D005621 ORTHO05D007248 1.6e-69 266.9 225 64.0
COL.COLO4_31445 Corchorus olitorius HOM05D005621 ORTHO05D007248 2.0e-69 266.5 213 67.1
Gohir.A05G160800 Gossypium hirsutum HOM05D005621 ORTHO05D007248 2.0e-69 266.5 229 65.5
PGR004G2009 Punica granatum HOM05D005621 ORTHO05D007248 3.5e-69 265.8 248 64.1
FvH4_3g08970 Fragaria vesca HOM05D005621 ORTHO05D007248 5.9e-69 265.0 232 64.7
Prupe.4G049400 Prunus persica HOM05D005621 ORTHO05D007248 5.9e-69 265.0 235 65.5
Gorai.009G168600 Gossypium raimondii HOM05D005621 ORTHO05D007248 7.7e-69 264.6 229 65.5
MD00G1115700 Malus domestica HOM05D005621 ORTHO05D007248 1.0e-68 264.2 230 66.5
Glyma.13G177900 Glycine max HOM05D005621 ORTHO05D007248 1.3e-68 263.8 230 66.1
HanXRQChr09g0253381 Helianthus annuus HOM05D005621 ORTHO05D007248 1.3e-68 263.8 227 67.8
MBI18_g13183_MAGBIO Magnolia biondii HOM05D005621 ORTHO05D007248 1.3e-68 263.8 180 76.1
MD10G1292500 Malus domestica HOM05D005621 ORTHO05D007248 1.3e-68 263.8 229 65.9
QL05p041319 Quercus lobata HOM05D005621 ORTHO05D007248 1.3e-68 263.8 239 62.8
TWI63G1165 Tripterygium wilfordii HOM05D005621 ORTHO05D007248 2.2e-68 263.1 211 67.8
Eucgr.D00609 Eucalyptus grandis HOM05D005621 ORTHO05D007248 2.9e-68 262.7 231 64.5
FAN16G3294 Fragaria x ananassa HOM05D005621 ORTHO05D007248 3.8e-68 262.3 231 64.1
FAN21G0060 Fragaria x ananassa HOM05D005621 ORTHO05D007248 3.8e-68 262.3 231 64.5
Nitab4.5_0005745g0010 Nicotiana tabacum HOM05D005621 ORTHO05D007248 3.8e-68 262.3 227 64.8
SalBow7G0434 Salvia bowleyana HOM05D005621 ORTHO05D007248 1.9e-67 260.0 229 63.8
SalBow7G3926 Salvia bowleyana HOM05D005621 ORTHO05D007248 1.9e-67 260.0 229 63.8
DCAR_004062 Daucus carota HOM05D005621 ORTHO05D007248 3.2e-67 259.2 231 65.8
FAN11G2270 Fragaria x ananassa HOM05D005621 ORTHO05D007248 4.2e-67 258.8 231 63.6
Nitab4.5_0013984g0010 Nicotiana tabacum HOM05D005621 ORTHO05D007248 5.5e-67 258.5 227 64.3
FAN25G0915 Fragaria x ananassa HOM05D005621 ORTHO05D007248 6.1e-66 255.0 178 74.7
Oeu029361.1 Olea europaea HOM05D005621 ORTHO05D007248 8.0e-66 254.6 226 65.0
Sopen02g022830 Solanum pennellii HOM05D005621 ORTHO05D007248 1.0e-65 254.2 229 64.2
Peaxi162Scf02261g00011 Petunia axillaris HOM05D005621 ORTHO05D007248 1.4e-65 253.8 221 63.3
Solyc02g077990.3 Solanum lycopersicum HOM05D005621 ORTHO05D007248 1.8e-65 253.4 229 63.8
Cc02_g13570 Coffea canephora HOM05D005621 ORTHO05D007248 2.3e-65 253.1 229 62.9
PGSC0003DMG400029704 Solanum tuberosum HOM05D005621 ORTHO05D007248 2.3e-65 253.1 230 64.8
Nitab4.5_0007329g0010 Nicotiana tabacum HOM05D005621 ORTHO05D007248 3.0e-65 252.7 227 63.4
Aqoxy1G02371 Aquilegia oxysepala HOM05D005621 ORTHO05D007248 6.8e-65 251.5 239 61.9
THA.LOC104814219 Tarenaya hassleriana HOM05D005621 ORTHO05D007248 6.8e-65 251.5 230 65.7
Migut.H01481 Erythranthe guttata HOM05D005621 ORTHO05D007248 8.8e-65 251.1 228 61.4
VMungo0251G0522 Vigna mungo HOM05D005621 ORTHO05D007248 2.6e-64 249.6 223 63.7
CAN.G529.17 Capsicum annuum HOM05D005621 ORTHO05D007248 5.7e-64 248.4 228 62.3
ECA236G3692 Erigeron canadensis HOM05D005621 ORTHO05D007248 5.7e-64 248.4 230 64.3
Phvul.002G229700 Phaseolus vulgaris HOM05D005621 ORTHO05D007248 7.5e-64 248.1 223 63.2
AUR62014837 Chenopodium quinoa HOM05D005621 ORTHO05D007248 1.3e-63 247.3 232 61.6
Ah.14g089540 Amaranthus hybridus HOM05D005621 ORTHO05D007248 2.8e-63 246.1 205 65.9
Potri.011G053900 Populus trichocarpa HOM05D005621 ORTHO05D007248 2.8e-63 246.1 236 61.0
ATR0217G013 Amborella trichopoda HOM05D005621 ORTHO05D007248 3.7e-63 245.7 176 73.9
Ah.09g237450 Amaranthus hybridus HOM05D005621 ORTHO05D007248 1.4e-62 243.8 226 62.4
AL4G29560 Arabidopsis lyrata HOM05D005621 ORTHO05D007248 1.4e-62 243.8 230 60.9
Nitab4.5_0012909g0010 Nicotiana tabacum HOM05D005621 ORTHO05D007248 1.4e-62 243.8 198 66.7
AT2G33800 Arabidopsis thaliana HOM05D005621 ORTHO05D007248 3.1e-62 242.7 226 61.1
RcHm_v2.0_Chr5g0008741 Rosa chinensis HOM05D005621 ORTHO05D007248 4.1e-62 242.3 230 61.7
AUR62017033 Chenopodium quinoa HOM05D005621 ORTHO05D007248 7.0e-62 241.5 231 60.6
EL10Ac8g20402 Beta vulgaris HOM05D005621 ORTHO05D007248 9.2e-62 241.1 234 60.7
Carub.0004s1547 Capsella rubella HOM05D005621 ORTHO05D007248 9.2e-62 241.1 230 60.4
Medtr4g088615 Medicago truncatula HOM05D005621 ORTHO05D007248 1.2e-61 240.7 224 60.7
BraA04t18105Z Brassica rapa HOM05D005621 ORTHO05D007248 2.0e-61 240.0 226 62.4
Ca_18557_v3 Cicer arietinum L. HOM05D005621 ORTHO05D007248 2.0e-61 240.0 229 58.1
Atru.chr10.1848 Acer truncatum HOM05D005621 ORTHO05D007248 5.9e-61 238.4 179 71.5
Ciclev10016057m.g Citrus clementina HOM05D005621 ORTHO05D007248 5.9e-61 238.4 233 62.2
C04p63370 Brassica napus HOM05D005621 ORTHO05D007248 7.7e-61 238.0 232 62.1
Sp4g16190 Schrenkiella parvula HOM05D005621 ORTHO05D007248 7.7e-61 238.0 231 62.8
A04p26030 Brassica napus HOM05D005621 ORTHO05D007248 1.0e-60 237.7 231 62.3
Aa31sc652G50 Aethionema arabicum HOM05D005621 ORTHO05D007248 1.3e-60 237.3 226 61.5
Aa31sc652G80 Aethionema arabicum HOM05D005621 ORTHO05D007248 1.3e-60 237.3 226 61.5
Duzib235G0013 Durio zibethinus HOM05D005621 ORTHO05D007248 1.7e-60 236.9 201 66.2
Sc05g0007560 Simmondsia chinensis HOM05D005621 ORTHO05D007248 2.3e-60 236.5 172 69.2
BolC4t27812H Brassica oleracea HOM05D005621 ORTHO05D007248 2.9e-60 236.1 232 61.6
SGA_v2.0_scaffold109G31092 Striga asiatica HOM05D005621 ORTHO05D007248 1.1e-59 234.2 215 63.3
Hund21218 Selenicereus undatus HOM05D005621 ORTHO05D007248 1.2e-58 230.7 216 60.2
CARHR127910 Cardamine hirsuta HOM05D005621 ORTHO05D007248 2.1e-58 229.9 229 61.1
TPR.G16335 Trifolium pratense HOM05D005621 ORTHO05D007248 3.0e-57 226.1 236 60.2
Lj2A290T34 Lonicera japonica HOM05D005621 ORTHO05D007248 8.9e-57 224.6 163 71.2
unitig_0.g964 Utricularia gibba HOM05D005621 ORTHO05D007248 3.4e-56 222.6 143 79.7
Psat7g115360 Pisum sativum HOM05D005621 ORTHO05D007248 3.7e-55 219.2 230 57.0
Actinidia16560 Actinidia chinensis HOM05D005621 ORTHO05D007248 1.2e-48 197.6 235 54.9
vmacro15918 Vaccinium macrocarpon HOM05D005621 ORTHO05D007248 2.0e-45 186.8 278 47.1
Rhsim02G0132300 Rhododendron simsii HOM05D005621 ORTHO05D007248 8.1e-42 174.9 248 49.2
BcaC02g07768 Brassica carinata HOM05D005621 ORTHO05D007248 4.6e-37 159.1 108 79.6
Os03g0452300 Oryza sativa ssp. japonica HOM05D005621 ORTHO05D007248 6.0e-37 158.7 149 56.4
FvH4_2g34180 Fragaria vesca HOM05D005621 ORTHO05D007248 1.7e-36 157.1 97 85.6
FAN24G2187 Fragaria x ananassa HOM05D005621 ORTHO05D007248 1.7e-36 157.1 97 85.6
Pp3c7_18380 Physcomitrium patens HOM05D005621 ORTHO05D007248 1.2e-32 144.4 135 59.3
Pp3c1_5050 Physcomitrium patens HOM05D005621 ORTHO05D007248 4.4e-32 142.5 135 59.3
Zm00001eb043240 Zea mays HOM05D005621 ORTHO05D007248 5.8e-32 142.1 149 51.0
Pp3c11_10680 Physcomitrium patens HOM05D005621 ORTHO05D007248 1.3e-31 141.0 125 60.0
SEGI_11788 Sequoiadendron giganteum HOM05D005621 ORTHO05D007248 4.9e-31 139.0 145 53.1
Mapoly0008s0189 Marchantia polymorpha HOM05D005621 ORTHO05D007248 5.4e-30 135.6 147 54.4
CBR_g50385 Chara braunii HOM05D005621 ORTHO05D007248 7.1e-30 135.2 140 52.9
AagrBONN_evm.TU.Sc2ySwM_344.1949 Anthoceros agrestis HOM05D005621 ORTHO05D007248 5.1e-28 129.0 148 54.7
Cc02_g13560 Coffea canephora HOM05D005621 ORTHO05D007248 3.3e-27 126.3 122 58.2
AL4G11520 Arabidopsis lyrata HOM05D005621 ORTHO05D007248 1.4e-25 120.9 75 84.0
VMungo0647G2378 Vigna mungo HOM05D005621 ORTHO05D007248 1.6e-18 97.4 78 61.5
HPP92_014187 Vanilla planifolia HOM05D005621 ORTHO05D007248 8.1e-18 95.1 155 44.5
Cfa000499 Carpinus fangiana HOM05D000007 ORTHO05D000039 6.9e-17 92.0 161 41.6
PRCOL_00000384 Prasinoderma coloniale HOM05D005621 ORTHO05D007248 1.5e-16 90.9 86 55.8
MCO06G207 Micromonas commoda HOM05D005621 ORTHO05D007248 1.3e-15 87.8 80 56.2
Cre16.g659950 Chlamydomonas reinhardtii HOM05D005621 ORTHO05D007248 6.2e-10 68.9 77 40.3
FAN19G2963 Fragaria x ananassa HOM05D005621 ORTHO05D045558 1.3e-07 61.2 126 35.7
FvH4_1g06340 Fragaria vesca HOM05D005621 ORTHO05D045558 1.7e-07 60.8 126 34.9


User provided reference genes

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