Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01018248001 Vitis vinifera HOM05D005128 ORTHO05D006227 1.8e-72 275.8 136 100.0
Prupe.2G127400 Prunus persica HOM05D005128 ORTHO05D006227 9.2e-69 263.5 136 94.1
TWI14G0708 Tripterygium wilfordii HOM05D005128 ORTHO05D006227 2.1e-68 262.3 136 94.1
TWI14G1050 Tripterygium wilfordii HOM05D005128 ORTHO05D006227 2.1e-68 262.3 136 94.1
MELO3C008212.2 Cucumis melo HOM05D005128 ORTHO05D006227 2.7e-68 261.9 136 94.1
ClCG11G006910 Citrullus lanatus HOM05D005128 ORTHO05D006227 4.6e-68 261.2 136 93.4
COL.COLO4_12428 Corchorus olitorius HOM05D005128 ORTHO05D006227 4.6e-68 261.2 136 93.4
Thecc.01G392500 Theobroma cacao HOM05D005128 ORTHO05D006227 4.6e-68 261.2 136 93.4
Manes.01G272200 Manihot esculenta HOM05D005128 ORTHO05D006227 6.0e-68 260.8 136 92.6
CsaV3_6G001140 Cucumis sativus L. HOM05D005128 ORTHO05D006227 7.8e-68 260.4 136 94.1
Duzib138G0976 Durio zibethinus HOM05D005128 ORTHO05D006227 1.3e-67 259.6 136 92.6
Nn6g33850 Nelumbo nucifera HOM05D005128 ORTHO05D006227 1.7e-67 259.2 136 92.6
Eucgr.E01576 Eucalyptus grandis HOM05D005128 ORTHO05D006227 8.6e-67 256.9 136 91.2
vmacro13485 Vaccinium macrocarpon HOM05D005128 ORTHO05D006227 8.6e-67 256.9 136 91.9
Actinidia40389 Actinidia chinensis HOM05D005128 ORTHO05D006227 1.1e-66 256.5 136 91.9
Sed0016496 Sechium edule HOM05D005128 ORTHO05D006227 1.1e-66 256.5 131 94.7
TAR374G1117 Trochodendron aralioides HOM05D005128 ORTHO05D006227 1.1e-66 256.5 136 91.2
PGR042G1446 Punica granatum HOM05D005128 ORTHO05D006227 2.5e-66 255.4 136 90.4
CSS0048126 Camellia sinensis var. sinensis HOM05D005128 ORTHO05D006227 3.6e-65 251.5 128 95.3
MBI04_g34109_MAGBIO Magnolia biondii HOM05D005128 ORTHO05D006227 3.6e-65 251.5 130 93.8
Nitab4.5_0002874g0020 Nicotiana tabacum HOM05D005128 ORTHO05D006227 3.6e-65 251.5 131 93.1
Nitab4.5_0003553g0110 Nicotiana tabacum HOM05D005128 ORTHO05D006227 3.6e-65 251.5 131 93.1
Peaxi162Scf00030g00515 Petunia axillaris HOM05D005128 ORTHO05D006227 3.6e-65 251.5 131 92.4
Cpa.g.sc101.28 Carica papaya HOM05D005128 ORTHO05D006227 4.7e-65 251.1 136 89.7
CiPaw.13G027900 Carya illinoinensis HOM05D005128 ORTHO05D006227 4.7e-65 251.1 136 91.2
Ciclev10029559m.g Citrus clementina HOM05D005128 ORTHO05D006227 4.7e-65 251.1 136 90.4
FvH4_7g09830 Fragaria vesca HOM05D005128 ORTHO05D006227 4.7e-65 251.1 131 92.4
FAN03G0006 Fragaria x ananassa HOM05D005128 ORTHO05D006227 4.7e-65 251.1 131 92.4
FAN10G0506 Fragaria x ananassa HOM05D005128 ORTHO05D006227 4.7e-65 251.1 131 92.4
QL04p030930 Quercus lobata HOM05D005128 ORTHO05D006227 4.7e-65 251.1 135 91.1
RcHm_v2.0_Chr1g0346991 Rosa chinensis HOM05D005128 ORTHO05D006227 4.7e-65 251.1 131 92.4
Gohir.D12G099300 Gossypium hirsutum HOM05D005128 ORTHO05D006227 6.2e-65 250.8 136 90.4
Gorai.008G108000 Gossypium raimondii HOM05D005128 ORTHO05D006227 6.2e-65 250.8 136 90.4
MD02G1216700 Malus domestica HOM05D005128 ORTHO05D006227 6.2e-65 250.8 136 89.7
Cfa011089 Carpinus fangiana HOM05D005128 ORTHO05D006227 8.1e-65 250.4 136 90.4
FAN10G2714 Fragaria x ananassa HOM05D005128 ORTHO05D006227 1.1e-64 250.0 131 91.6
FAN06G2910 Fragaria x ananassa HOM05D005128 ORTHO05D006227 1.4e-64 249.6 129 92.2
Migut.B01551 Erythranthe guttata HOM05D005128 ORTHO05D006227 4.0e-64 248.1 131 91.6
HanXRQChr05g0138471 Helianthus annuus HOM05D005128 ORTHO05D006227 4.0e-64 248.1 131 91.6
Atru.chr5.161 Acer truncatum HOM05D005128 ORTHO05D006227 5.2e-64 247.7 134 89.6
ECA234G3101 Erigeron canadensis HOM05D005128 ORTHO05D006227 5.2e-64 247.7 131 90.8
FAN06G2047 Fragaria x ananassa HOM05D005128 ORTHO05D006227 5.2e-64 247.7 131 91.6
Potri.014G045200 Populus trichocarpa HOM05D005128 ORTHO05D006227 5.2e-64 247.7 138 89.1
Solyc01g090450.3 Solanum lycopersicum HOM05D005128 ORTHO05D006227 5.2e-64 247.7 131 91.6
Lsat_1_v5_gn_4_46700 Lactuca sativa HOM05D005128 ORTHO05D006227 6.8e-64 247.3 131 90.8
MSTRG.20701 Avicennia marina HOM05D005128 ORTHO05D006227 8.9e-64 246.9 131 90.8
Cc02_g24910 Coffea canephora HOM05D005128 ORTHO05D006227 8.9e-64 246.9 131 91.6
CAN.G362.11 Capsicum annuum HOM05D005128 ORTHO05D006227 1.2e-63 246.5 131 90.1
Gohir.A12G096500 Gossypium hirsutum HOM05D005128 ORTHO05D006227 1.5e-63 246.1 136 88.2
TWI59G1443 Tripterygium wilfordii HOM05D005128 ORTHO05D006227 1.5e-63 246.1 133 89.5
Sopen01g036240 Solanum pennellii HOM05D005128 ORTHO05D006227 2.6e-63 245.4 131 90.8
Potri.002G136500 Populus trichocarpa HOM05D005128 ORTHO05D006227 3.4e-63 245.0 138 87.7
Migut.A00726 Erythranthe guttata HOM05D005128 ORTHO05D006227 4.4e-63 244.6 131 90.1
ATR0057G123 Amborella trichopoda HOM05D005128 ORTHO05D006227 5.8e-63 244.2 136 86.8
Aqoxy3G02773 Aquilegia oxysepala HOM05D005128 ORTHO05D006227 1.3e-62 243.0 129 91.5
Manes.05G053000 Manihot esculenta HOM05D005128 ORTHO05D006227 1.3e-62 243.0 131 89.3
SGA_v2.0_scaffold52G19215 Striga asiatica HOM05D005128 ORTHO05D006227 4.9e-62 241.1 127 91.3
unitig_0.g1324 Utricularia gibba HOM05D005128 ORTHO05D006227 4.9e-62 241.1 131 88.5
PSO782G3280 Papaver somniferum HOM05D005128 ORTHO05D006227 6.4e-62 240.7 136 87.5
Thhalv10005116m.g Eutrema salsugineum HOM05D005128 ORTHO05D006227 1.4e-61 239.6 136 86.0
Sp2g28380 Schrenkiella parvula HOM05D005128 ORTHO05D006227 1.9e-61 239.2 136 85.3
Medtr1g112900 Medicago truncatula HOM05D005128 ORTHO05D006227 5.4e-61 237.7 136 85.3
PSO063G1454 Papaver somniferum HOM05D005128 ORTHO05D006227 5.4e-61 237.7 136 86.8
Lj3g0015662 Lotus japonicus HOM05D005128 ORTHO05D006227 7.1e-61 237.3 136 85.3
THA.LOC104814071 Tarenaya hassleriana HOM05D005128 ORTHO05D006227 7.1e-61 237.3 136 84.6
Medtr8g006725 Medicago truncatula HOM05D005128 ORTHO05D006227 9.2e-61 236.9 136 85.3
Hund11691 Selenicereus undatus HOM05D005128 ORTHO05D006227 1.2e-60 236.5 136 84.6
Aa31LG5G70 Aethionema arabicum HOM05D005128 ORTHO05D006227 2.1e-60 235.7 136 84.6
CARHR248040 Cardamine hirsuta HOM05D005128 ORTHO05D006227 2.1e-60 235.7 131 87.8
CDE11G0478 Ceratophyllum demersum HOM05D005128 ORTHO05D006227 2.1e-60 235.7 136 83.8
AUR62023426 Chenopodium quinoa HOM05D005128 ORTHO05D006227 2.1e-60 235.7 136 83.1
FAN03G2425 Fragaria x ananassa HOM05D005128 ORTHO05D006227 2.1e-60 235.7 154 77.3
Carub.0006s3721 Capsella rubella HOM05D005128 ORTHO05D006227 3.5e-60 235.0 131 86.3
AL6G53500 Arabidopsis lyrata HOM05D005128 ORTHO05D006227 4.6e-60 234.6 131 86.3
AT4G01710 Arabidopsis thaliana HOM05D005128 ORTHO05D006227 4.6e-60 234.6 131 86.3
A06p32130 Brassica napus HOM05D005128 ORTHO05D006227 6.0e-60 234.2 136 83.1
BolC3t18340H Brassica oleracea HOM05D005128 ORTHO05D006227 6.0e-60 234.2 136 83.1
BraA06t26141Z Brassica rapa HOM05D005128 ORTHO05D006227 6.0e-60 234.2 136 83.1
Ca_14055_v3 Cicer arietinum L. HOM05D005128 ORTHO05D006227 6.0e-60 234.2 136 84.6
Glyma.07G112500 Glycine max HOM05D005128 ORTHO05D006227 6.0e-60 234.2 136 83.8
VMungo0331G0261 Vigna mungo HOM05D005128 ORTHO05D006227 6.0e-60 234.2 136 83.8
Zm00001eb201920 Zea mays HOM05D005128 ORTHO05D006227 7.8e-60 233.8 137 83.9
C03p60810 Brassica napus HOM05D005128 ORTHO05D006227 1.3e-59 233.0 136 82.4
Psat0s118g0040 Pisum sativum HOM05D005128 ORTHO05D006227 1.3e-59 233.0 136 84.6
EL10Ac1g00782 Beta vulgaris HOM05D005128 ORTHO05D006227 2.3e-59 232.3 136 81.6
Lalb_Chr13g0304581 Lupinus albus HOM05D005128 ORTHO05D006227 3.0e-59 231.9 134 82.8
Phvul.010G052100 Phaseolus vulgaris HOM05D005128 ORTHO05D006227 6.6e-59 230.7 136 83.1
TPR.G33121 Trifolium pratense HOM05D005128 ORTHO05D006227 6.6e-59 230.7 136 83.8
Glyma.03G114200 Glycine max HOM05D005128 ORTHO05D006227 8.7e-59 230.3 136 83.1
Os11g0557900 Oryza sativa ssp. japonica HOM05D005128 ORTHO05D006227 8.7e-59 230.3 131 85.5
AUR62013728 Chenopodium quinoa HOM05D005128 ORTHO05D006227 1.1e-58 229.9 136 80.9
Lalb_Chr07g0195501 Lupinus albus HOM05D005128 ORTHO05D006227 1.5e-58 229.6 132 83.3
HPP92_009947 Vanilla planifolia HOM05D005379 ORTHO05D006227 6.2e-57 224.2 128 83.6
Nn1g00897 Nelumbo nucifera HOM05D005128 ORTHO05D006227 8.1e-57 223.8 136 80.1
HanXRQChr16g0520301 Helianthus annuus HOM05D005128 ORTHO05D006227 9.0e-56 220.3 125 83.2
AT5G65274 Arabidopsis thaliana HOM05D005128 ORTHO05D006227 2.0e-55 219.2 136 77.9
PGSC0003DMG400026042 Solanum tuberosum HOM05D005128 ORTHO05D006227 2.0e-55 219.2 184 64.1
arahy.Tifrunner.gnm1.ann1.L9RWF4 Arachis hypogaea HOM05D005128 ORTHO05D006227 4.4e-55 218.0 168 68.5
arahy.Tifrunner.gnm1.ann1.V0IP08 Arachis hypogaea HOM05D005128 ORTHO05D006227 1.3e-54 216.5 168 67.9
Carub.0008s2615 Capsella rubella HOM05D005128 ORTHO05D006227 3.8e-54 214.9 136 77.2
Gohir.D11G020200 Gossypium hirsutum HOM05D005128 ORTHO05D006227 3.2e-53 211.8 136 76.5
MD07G1103100 Malus domestica HOM05D005128 ORTHO05D006227 4.2e-53 211.5 136 80.1
Gorai.007G021500 Gossypium raimondii HOM05D005128 ORTHO05D006227 1.3e-51 206.5 136 73.5
Ah.05g173200 Amaranthus hybridus HOM05D005128 ORTHO05D006227 3.0e-51 205.3 200 56.5
Haze_02808 Corylus avellana HOM05D005128 ORTHO05D006227 3.0e-51 205.3 137 78.8
Gohir.A13G167950 Gossypium hirsutum HOM05D005128 ORTHO05D006227 5.1e-51 204.5 136 72.1
AL8G42840 Arabidopsis lyrata HOM05D005128 ORTHO05D006227 5.6e-50 201.1 131 74.8
FAN01G3136 Fragaria x ananassa HOM05D005128 ORTHO05D006227 4.0e-48 194.9 131 77.1
AagrBONN_evm.TU.Sc2ySwM_369.249 Anthoceros agrestis HOM05D005128 ORTHO05D006227 1.3e-46 189.9 130 66.2
Mapoly0006s0266 Marchantia polymorpha HOM05D005128 ORTHO05D006227 3.8e-46 188.3 131 65.6
SMO203G0150 Selaginella moellendorffii HOM05D005128 ORTHO05D006227 4.9e-46 188.0 123 70.7
AagrBONN_evm.TU.Sc2ySwM_369.256 Anthoceros agrestis HOM05D005128 ORTHO05D006227 1.9e-45 186.0 131 68.7
Sc02g0003030 Simmondsia chinensis HOM05D005128 ORTHO05D006227 4.2e-45 184.9 102 84.3
SGA_v2.0_scaffold153G36917 Striga asiatica HOM05D005128 ORTHO05D006227 7.1e-45 184.1 127 74.8
CiPaw.14G021600 Carya illinoinensis HOM05D005128 ORTHO05D006227 1.0e-43 180.3 144 70.1
SEGI_29435 Sequoiadendron giganteum HOM05D005128 ORTHO05D006227 3.7e-41 171.8 127 67.7
Pp3c15_3940 Physcomitrium patens HOM05D005128 ORTHO05D006227 4.8e-41 171.4 130 62.3
Eucgr.E00550 Eucalyptus grandis HOM05D005128 ORTHO05D006227 1.5e-39 166.4 97 82.5
Oeu064660.1 Olea europaea HOM05D005128 ORTHO05D006227 3.4e-39 165.2 86 94.2
Dinv44074 Davidia involucrata HOM05D005128 ORTHO05D006227 5.8e-39 164.5 93 88.2
Nitab4.5_0029376g0010 Nicotiana tabacum HOM05D005128 ORTHO05D006227 1.1e-37 160.2 85 91.8
CDE02G2422 Ceratophyllum demersum HOM05D005128 ORTHO05D006227 7.1e-37 157.5 79 92.4
SalBow7G0891 Salvia bowleyana HOM05D005128 ORTHO05D006227 7.1e-37 157.5 86 89.5
Eucgr.L02413 Eucalyptus grandis HOM05D005128 ORTHO05D006227 7.9e-36 154.1 80 88.8
SalBow5G0414 Salvia bowleyana HOM05D005128 ORTHO05D006227 2.3e-35 152.5 86 86.0
Eucgr.C04409 Eucalyptus grandis HOM05D005128 ORTHO05D006227 3.9e-35 151.8 92 80.4
Sed0016493 Sechium edule HOM05D005128 ORTHO05D006227 6.7e-35 151.0 135 64.4
Eucgr.J01375 Eucalyptus grandis HOM05D005128 ORTHO05D006227 1.5e-34 149.8 90 81.1
Eucgr.E04335 Eucalyptus grandis HOM05D005128 ORTHO05D006227 1.9e-34 149.4 80 87.5
Lalb_Chr13g0304531 Lupinus albus HOM05D005128 ORTHO05D006227 1.6e-33 146.4 89 79.8
Lalb_Chr13g0304521 Lupinus albus HOM05D005128 ORTHO05D006227 3.7e-33 145.2 89 78.7
Lalb_Chr13g0304591 Lupinus albus HOM05D005128 ORTHO05D006227 3.7e-33 145.2 89 78.7
MD15G1416400 Malus domestica HOM05D005128 ORTHO05D006227 1.1e-32 143.7 105 71.4
Sabra14G0033100 Salix brachista HOM05D005128 ORTHO05D006227 3.1e-32 142.1 71 93.0
Eucgr.H02816 Eucalyptus grandis HOM05D005128 ORTHO05D006227 1.5e-31 139.8 75 86.7
Eucgr.E02797 Eucalyptus grandis HOM05D005128 ORTHO05D006227 3.8e-30 135.2 89 79.8
Eucgr.J01567 Eucalyptus grandis HOM05D005128 ORTHO05D006227 6.5e-30 134.4 68 91.2
Hund07697 Selenicereus undatus HOM05D005128 ORTHO05D006227 1.4e-29 133.3 85 77.6
Lj9C558G6 Lonicera japonica HOM05D001638 ORTHO05D001875 1.2e-23 113.6 65 76.9
Gorai.002G193300 Gossypium raimondii HOM05D005128 ORTHO05D006227 2.5e-21 105.9 91 59.3
Hund17078 Selenicereus undatus HOM05D005128 ORTHO05D006227 1.4e-19 100.1 91 59.3
Gohir.D01G155933 Gossypium hirsutum HOM05D005128 ORTHO05D006227 1.7e-17 93.2 91 54.9
Lalb_Chr13g0304551 Lupinus albus HOM05D005128 ORTHO05D006227 6.3e-17 91.3 46 87.0
TPR.G6927 Trifolium pratense HOM05D005128 ORTHO05D006922 2.4e-16 89.4 45 86.7
MD07G1103500 Malus domestica HOM05D005128 ORTHO05D006227 6.5e-14 81.3 56 76.8
Gohir.A11G020500 Gossypium hirsutum HOM05D005128 ORTHO05D006227 1.7e-09 66.6 57 63.2
TPR.G6976 Trifolium pratense HOM05D005128 ORTHO05D006227 4.8e-09 65.1 41 70.7
BcaC03g18322 Brassica carinata HOM05D005128 ORTHO05D006227 8.2e-09 64.3 42 76.2


User provided reference genes

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