Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01017553001 Vitis vinifera HOM05D003914 ORTHO05D001189 1.7e-114 416.0 202 100.0
Rhsim08G0208100 Rhododendron simsii HOM05D003914 ORTHO05D001189 8.0e-93 344.0 200 81.0
Duzib235G0729 Durio zibethinus HOM05D003914 ORTHO05D001189 2.3e-92 342.4 200 79.0
CSS0032385 Camellia sinensis var. sinensis HOM05D003914 ORTHO05D001189 6.8e-92 340.9 200 79.5
Thecc.06G038600 Theobroma cacao HOM05D003914 ORTHO05D001189 8.8e-92 340.5 201 79.1
vmacro19039 Vaccinium macrocarpon HOM05D003914 ORTHO05D001189 1.5e-91 339.7 200 80.0
Gorai.011G089200 Gossypium raimondii HOM05D003914 ORTHO05D001189 1.4e-89 333.2 201 77.6
Gohir.D10G082300 Gossypium hirsutum HOM05D003914 ORTHO05D001189 2.4e-89 332.4 201 77.6
Actinidia25447 Actinidia chinensis HOM05D003914 ORTHO05D001189 3.1e-89 332.0 200 79.0
Cfa001895 Carpinus fangiana HOM05D003914 ORTHO05D001189 7.0e-89 330.9 201 78.6
MD08G1215300 Malus domestica HOM05D003914 ORTHO05D001189 7.0e-89 330.9 200 77.5
Ciclev10024784m.g Citrus clementina HOM05D003914 ORTHO05D001189 2.0e-88 329.3 201 76.1
Dinv21395 Davidia involucrata HOM05D003914 ORTHO05D001189 7.7e-88 327.4 200 79.0
QL05p034889 Quercus lobata HOM05D003914 ORTHO05D001189 1.3e-87 326.6 201 76.6
Gohir.A10G069101 Gossypium hirsutum HOM05D003914 ORTHO05D001189 1.7e-87 326.2 201 75.6
Prupe.2G099100 Prunus persica HOM05D003914 ORTHO05D001189 2.2e-87 325.9 201 77.1
RcHm_v2.0_Chr1g0336931 Rosa chinensis HOM05D003914 ORTHO05D001189 3.8e-87 325.1 201 77.1
CiPaw.01G252800 Carya illinoinensis HOM05D003914 ORTHO05D001189 5.0e-87 324.7 201 76.1
MD15G1399200 Malus domestica HOM05D003914 ORTHO05D001189 2.5e-86 322.4 199 75.4
Oeu010367.1 Olea europaea HOM05D003914 ORTHO05D001189 3.6e-85 318.5 200 72.5
FvH4_5g27200 Fragaria vesca HOM05D003914 ORTHO05D001189 6.1e-85 317.8 201 74.6
FAN13G1654 Fragaria x ananassa HOM05D003914 ORTHO05D001189 6.1e-85 317.8 201 74.6
FAN18G0022 Fragaria x ananassa HOM05D003914 ORTHO05D001189 8.0e-85 317.4 201 74.6
Manes.04G104700 Manihot esculenta HOM05D003914 ORTHO05D001189 2.3e-84 315.8 201 76.1
FAN08G1096 Fragaria x ananassa HOM05D003914 ORTHO05D001189 4.0e-84 315.1 201 74.1
SGA_v2.0_scaffold5G02755 Striga asiatica HOM05D003914 ORTHO05D001189 6.8e-84 314.3 201 72.1
COL.COLO4_26660 Corchorus olitorius HOM05D003914 ORTHO05D001189 1.2e-83 313.5 201 75.1
CANSAT56G3222 Cannabis sativa HOM05D003914 ORTHO05D001189 2.6e-83 312.4 201 71.6
Cc04_g04890 Coffea canephora HOM05D003914 ORTHO05D001189 3.4e-83 312.0 200 73.0
Lj5A78T80 Lonicera japonica HOM05D003914 ORTHO05D001189 3.4e-83 312.0 200 73.0
Glyma.14G005800 Glycine max HOM05D003914 ORTHO05D001189 1.7e-82 309.7 201 71.6
TPR.G15053 Trifolium pratense HOM05D003914 ORTHO05D001189 4.8e-82 308.1 201 71.1
THA.LOC104812443 Tarenaya hassleriana HOM05D003914 ORTHO05D001189 1.4e-81 306.6 200 70.5
Medtr5g097890 Medicago truncatula HOM05D003914 ORTHO05D001189 5.4e-81 304.7 199 71.4
arahy.Tifrunner.gnm1.ann1.39XWEQ Arachis hypogaea HOM05D003914 ORTHO05D001189 1.6e-80 303.1 201 69.7
arahy.Tifrunner.gnm1.ann1.E1J0LN Arachis hypogaea HOM05D003914 ORTHO05D001189 2.0e-80 302.8 201 69.2
VMungo0647G1679 Vigna mungo HOM05D003914 ORTHO05D001189 2.0e-80 302.8 201 70.1
Phvul.008G287100 Phaseolus vulgaris HOM05D003914 ORTHO05D001189 2.7e-80 302.4 201 70.1
TAR625G0765 Trochodendron aralioides HOM05D003914 ORTHO05D001189 2.7e-80 302.4 200 71.5
Ca_06471_v3 Cicer arietinum L. HOM05D003914 ORTHO05D001189 7.7e-80 300.8 212 67.5
Sc26g0002670 Simmondsia chinensis HOM05D003914 ORTHO05D001189 7.7e-80 300.8 200 70.5
ClCG02G022560 Citrullus lanatus HOM05D003914 ORTHO05D001189 1.7e-79 299.7 201 72.1
Potri.003G180100 Populus trichocarpa HOM05D003914 ORTHO05D001189 1.7e-79 299.7 203 71.4
DCAR_025582 Daucus carota HOM05D003914 ORTHO05D001189 1.1e-78 297.0 201 68.2
Eucgr.F03948 Eucalyptus grandis HOM05D003914 ORTHO05D001189 1.1e-78 297.0 201 70.1
Lalb_Chr04g0247201 Lupinus albus HOM05D003914 ORTHO05D001189 1.1e-78 297.0 201 68.2
TWI12G1414 Tripterygium wilfordii HOM05D003914 ORTHO05D001189 1.1e-78 297.0 200 70.5
MELO3C014532.2 Cucumis melo HOM05D003914 ORTHO05D001189 1.9e-78 296.2 201 70.1
PGR102G3368 Punica granatum HOM05D003914 ORTHO05D001189 1.9e-78 296.2 201 67.7
CAN.G407.47 Capsicum annuum HOM05D003914 ORTHO05D001189 2.5e-78 295.8 201 68.2
CsaV3_6G038690 Cucumis sativus L. HOM05D005551 ORTHO05D001189 3.3e-78 295.4 198 72.2
LjContig00081g0020682 Lotus japonicus HOM05D003914 ORTHO05D001189 4.2e-78 295.0 201 68.2
arahy.Tifrunner.gnm1.ann1.448EM4 Arachis hypogaea HOM05D003914 ORTHO05D001189 5.5e-78 294.7 201 68.7
EL10Ac3g05211 Beta vulgaris HOM05D003914 ORTHO05D001189 5.5e-78 294.7 198 71.2
Nn5g28958 Nelumbo nucifera HOM05D003914 ORTHO05D001189 1.6e-77 293.1 201 68.2
TAR381G0623 Trochodendron aralioides HOM05D003914 ORTHO05D001189 2.1e-77 292.7 200 71.0
Solyc03g117120.4 Solanum lycopersicum HOM05D003914 ORTHO05D001189 2.8e-77 292.4 201 69.2
AT1G80680 Arabidopsis thaliana HOM05D003914 ORTHO05D001189 3.6e-77 292.0 200 67.0
A07p26790 Brassica napus HOM05D003914 ORTHO05D001189 4.7e-77 291.6 200 69.0
BraA07t30322Z Brassica rapa HOM05D003914 ORTHO05D001189 4.7e-77 291.6 200 69.0
Thhalv10018057m.g Eutrema salsugineum HOM05D003914 ORTHO05D001189 4.7e-77 291.6 200 68.0
A02p23230 Brassica napus HOM05D003914 ORTHO05D001189 1.0e-76 290.4 200 68.5
BraA02t07320Z Brassica rapa HOM05D003914 ORTHO05D001189 1.0e-76 290.4 200 68.5
BcaC08g45332 Brassica carinata HOM05D003914 ORTHO05D001189 1.4e-76 290.0 200 68.5
Carub.0002s2688 Capsella rubella HOM05D003914 ORTHO05D001189 1.4e-76 290.0 200 67.0
PGSC0003DMG400014195 Solanum tuberosum HOM05D003914 ORTHO05D001189 4.0e-76 288.5 201 68.2
AL2G40760 Arabidopsis lyrata HOM05D003914 ORTHO05D001189 5.2e-76 288.1 200 66.5
Sp5g35080 Schrenkiella parvula HOM05D003914 ORTHO05D001189 6.8e-76 287.7 200 68.0
Sopen03g036030 Solanum pennellii HOM05D003914 ORTHO05D001189 8.9e-76 287.3 201 68.2
BcaB02g07257 Brassica carinata HOM05D003914 ORTHO05D001189 2.6e-75 285.8 200 67.5
C06p29420 Brassica napus HOM05D003914 ORTHO05D001189 2.6e-75 285.8 200 68.0
BolC6t38107H Brassica oleracea HOM05D003914 ORTHO05D001189 2.6e-75 285.8 200 68.0
Sed0002099 Sechium edule HOM05D003914 ORTHO05D001189 5.7e-75 284.6 201 67.7
BcaB05g25235 Brassica carinata HOM05D003914 ORTHO05D001189 9.8e-75 283.9 200 66.5
Haze_16646 Corylus avellana HOM05D003914 ORTHO05D001189 2.2e-74 282.7 306 51.0
ECA247G0583 Erigeron canadensis HOM05D003914 ORTHO05D001189 2.2e-74 282.7 198 67.2
Migut.I00709 Erythranthe guttata HOM05D003914 ORTHO05D001189 2.2e-74 282.7 201 66.2
SalBow7G0967 Salvia bowleyana HOM05D003914 ORTHO05D001189 3.7e-74 282.0 201 64.7
SalBow5G0986 Salvia bowleyana HOM05D003914 ORTHO05D001189 3.2e-73 278.9 201 64.2
SalBow5G5560 Salvia bowleyana HOM05D003914 ORTHO05D001189 3.2e-73 278.9 201 64.2
PSO210G6726 Papaver somniferum HOM05D003914 ORTHO05D001189 1.2e-72 276.9 200 67.0
Aa31LG7G450 Aethionema arabicum HOM05D003914 ORTHO05D001189 3.5e-72 275.4 201 65.2
PSO447G0077 Papaver somniferum HOM05D003914 ORTHO05D001189 5.9e-72 274.6 200 66.5
AUR62019191 Chenopodium quinoa HOM05D003914 ORTHO05D001189 7.8e-72 274.2 184 69.6
SalBow5G1255 Salvia bowleyana HOM05D003914 ORTHO05D001189 7.8e-72 274.2 201 63.7
Ah.02g130190 Amaranthus hybridus HOM05D003914 ORTHO05D001189 1.5e-70 270.0 226 60.2
AUR62026733 Chenopodium quinoa HOM05D003914 ORTHO05D001189 2.5e-70 269.2 258 55.0
C02p36990 Brassica napus HOM05D003914 ORTHO05D001189 3.3e-70 268.9 181 69.6
Aqoxy7G03430 Aquilegia oxysepala HOM05D003914 ORTHO05D001189 5.6e-70 268.1 200 65.0
HanXRQChr03g0080251 Helianthus annuus HOM05D003914 ORTHO05D001189 3.6e-69 265.4 198 64.1
ATR0048G029 Amborella trichopoda HOM05D003914 ORTHO05D001189 6.1e-69 264.6 201 63.7
Lsat_1_v5_gn_1_32000 Lactuca sativa HOM05D003914 ORTHO05D001189 8.0e-69 264.2 200 60.0
Peaxi162Scf00332g00329 Petunia axillaris HOM05D003914 ORTHO05D001189 3.2e-65 252.3 201 61.2
CDE05G2347 Ceratophyllum demersum HOM05D003914 ORTHO05D001189 7.8e-64 247.7 206 54.4
HPP92_024673 Vanilla planifolia HOM05D003914 ORTHO05D001189 3.0e-63 245.7 198 57.6
Os03g0172000 Oryza sativa ssp. japonica HOM05D003914 ORTHO05D001189 8.6e-63 244.2 193 56.5
unitig_61.g26229 Utricularia gibba HOM05D003914 ORTHO05D001189 7.3e-62 241.1 204 56.4
Actinidia28303 Actinidia chinensis HOM05D003914 ORTHO05D001189 1.4e-57 226.9 181 67.4
Nitab4.5_0011117g0010 Nicotiana tabacum HOM05D003914 ORTHO05D001189 3.2e-57 225.7 201 55.7
Zm00001eb402160 Zea mays HOM05D003914 ORTHO05D001189 5.4e-57 224.9 193 52.3
SEGI_18885 Sequoiadendron giganteum HOM05D003914 ORTHO05D001189 3.5e-56 222.2 201 52.2
Zm00001eb072150 Zea mays HOM05D003914 ORTHO05D001189 4.6e-56 221.9 193 51.8
Zm00001eb037140 Zea mays HOM05D003914 ORTHO05D001189 1.3e-55 220.3 193 51.3
Zm00001eb104230 Zea mays HOM05D003914 ORTHO05D001189 2.3e-55 219.5 193 51.8
Zm00001eb242170 Zea mays HOM05D003914 ORTHO05D001189 1.4e-52 210.3 193 49.7
Zm00001eb336550 Zea mays HOM05D003914 ORTHO05D001189 8.9e-52 207.6 185 50.8
Zm00001eb075600 Zea mays HOM05D003914 ORTHO05D001189 2.6e-51 206.1 185 50.8
Nitab4.5_0001454g0080 Nicotiana tabacum HOM05D003914 ORTHO05D001189 1.7e-50 203.4 230 47.0
arahy.Tifrunner.gnm1.ann1.AIB04B Arachis hypogaea HOM05D003914 ORTHO05D001189 4.1e-49 198.7 155 61.3
HanXRQChr08g0217431 Helianthus annuus HOM05D003914 ORTHO05D001189 6.6e-47 191.4 137 67.2
Pp3c26_7720 Physcomitrium patens HOM05D003914 ORTHO05D001189 1.5e-46 190.3 194 45.9
HanXRQChr02g0034961 Helianthus annuus HOM05D003914 ORTHO05D001189 1.1e-44 184.1 137 65.7
Mapoly0028s0046 Marchantia polymorpha HOM05D003914 ORTHO05D001189 2.0e-43 179.9 200 42.0
AagrBONN_evm.TU.Sc2ySwM_340.72 Anthoceros agrestis HOM05D003914 ORTHO05D001189 7.6e-43 177.9 205 44.9
SHI11253 Sapria himalayana HOM05D003914 ORTHO05D001189 1.1e-41 174.1 137 63.5
CARHR073840 Cardamine hirsuta HOM05D003914 ORTHO05D001189 7.1e-41 171.4 106 70.8
HanXRQChr02g0034921 Helianthus annuus HOM05D003914 ORTHO05D001189 4.6e-40 168.7 125 65.6
Atru.chr10.2396 Acer truncatum HOM05D003914 ORTHO05D001189 3.3e-38 162.5 97 79.4
SMO367G0807 Selaginella moellendorffii HOM05D003914 ORTHO05D001189 3.6e-37 159.1 202 39.1
MBI05_g01294_MAGBIO Magnolia biondii HOM05D003914 ORTHO05D001189 3.1e-36 156.0 100 71.0
Nn1g04288 Nelumbo nucifera HOM05D003914 ORTHO05D001189 1.0e-31 141.0 111 58.6
AUR62013548 Chenopodium quinoa HOM05D003914 ORTHO05D001189 2.3e-31 139.8 148 51.4
Zm00001eb052930 Zea mays HOM05D003914 ORTHO05D006988 5.6e-30 135.2 132 47.7
Zm00001eb059520 Zea mays HOM05D003914 ORTHO05D001189 1.3e-29 134.0 129 48.1
Zm00001eb421450 Zea mays HOM05D003914 ORTHO05D001189 1.3e-29 134.0 129 48.1
SalBow5G3025 Salvia bowleyana HOM05D003914 ORTHO05D001189 4.0e-28 129.0 106 57.5
Pp3c26_7670 Physcomitrium patens HOM05D003914 ORTHO05D001189 5.3e-28 128.6 141 43.3
CARHR073830 Cardamine hirsuta HOM05D003914 ORTHO05D001189 1.9e-25 120.2 94 61.7
Zm00001eb236280 Zea mays HOM05D003914 ORTHO05D001189 2.1e-24 116.7 129 44.2
CBR_g34675 Chara braunii HOM05D003914 ORTHO05D001189 1.8e-20 103.6 198 30.8
Zm00001eb154890 Zea mays HOM05D003914 ORTHO05D001189 1.3e-18 97.4 98 45.9
Psat2g003960 Pisum sativum HOM05D003914 ORTHO05D001189 8.4e-18 94.7 55 70.9
Zm00001eb386790 Zea mays HOM05D003914 ORTHO05D001189 3.2e-17 92.8 98 44.9
SalBow5G5111 Salvia bowleyana HOM05D003914 ORTHO05D001189 3.9e-15 85.9 58 62.1
Cpa.g.sc2.93 Carica papaya HOM05D003914 ORTHO05D001189 2.0e-11 73.6 40 70.0
Cpa.g.sc2.90 Carica papaya HOM05D003914 ORTHO05D001189 5.0e-10 68.9 57 61.4
SalBow7G2866 Salvia bowleyana HOM05D003914 ORTHO05D001189 6.1e-08 62.0 137 32.1


User provided reference genes

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