Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01016927001 Vitis vinifera HOM05D005962 ORTHO05D007325 5.9e-129 464.2 227 100.0
TAR623G1297 Trochodendron aralioides HOM05D005962 ORTHO05D007325 1.8e-117 426.0 228 92.5
CSS0027495 Camellia sinensis var. sinensis HOM05D005962 ORTHO05D007325 6.6e-112 407.5 225 87.1
CiPaw.02G144100 Carya illinoinensis HOM05D005962 ORTHO05D007325 6.6e-112 407.5 227 86.8
Nn4g25123 Nelumbo nucifera HOM05D005962 ORTHO05D007325 8.1e-110 400.6 227 85.9
Prupe.3G054900 Prunus persica HOM05D005962 ORTHO05D007325 1.8e-109 399.4 227 85.9
Haze_15888 Corylus avellana HOM05D005962 ORTHO05D007325 5.2e-109 397.9 227 85.0
Phvul.010G143300 Phaseolus vulgaris HOM05D005962 ORTHO05D007325 1.5e-108 396.4 227 84.6
Rhsim08G0229500 Rhododendron simsii HOM05D005962 ORTHO05D007325 1.5e-108 396.4 225 84.9
Sabra17G0126400 Salix brachista HOM05D005962 ORTHO05D007325 1.5e-108 396.4 227 83.7
MBI01_g35895_MAGBIO Magnolia biondii HOM05D005962 ORTHO05D007325 2.0e-108 396.0 227 84.6
Glyma.08G199200 Glycine max HOM05D005962 ORTHO05D007325 2.9e-107 392.1 227 84.1
VMungo0331G0822 Vigna mungo HOM05D005962 ORTHO05D007325 6.4e-107 391.0 230 83.5
vmacro18833 Vaccinium macrocarpon HOM05D005962 ORTHO05D007325 8.3e-107 390.6 225 84.4
Thecc.06G103400 Theobroma cacao HOM05D005962 ORTHO05D007325 1.4e-106 389.8 227 84.1
Ciclev10026335m.g Citrus clementina HOM05D005962 ORTHO05D007325 1.9e-106 389.4 228 84.2
Cc00_g23930 Coffea canephora HOM05D005962 ORTHO05D007325 3.2e-106 388.7 227 84.6
COL.COLO4_30547 Corchorus olitorius HOM05D005962 ORTHO05D007325 1.2e-105 386.7 228 83.3
Gohir.D01G215700 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.6e-105 386.3 227 83.3
Gorai.002G261900 Gossypium raimondii HOM05D005962 ORTHO05D007325 1.6e-105 386.3 227 83.3
QL08p056642 Quercus lobata HOM05D005962 ORTHO05D007325 1.6e-105 386.3 225 84.4
Actinidia32123 Actinidia chinensis HOM05D005962 ORTHO05D007325 2.1e-105 386.0 227 81.1
Rhsim08G0229700 Rhododendron simsii HOM05D005962 ORTHO05D007325 1.0e-104 383.6 238 79.4
Aqoxy2G04031 Aquilegia oxysepala HOM05D005962 ORTHO05D007325 1.7e-104 382.9 227 83.3
Lj3g0005277 Lotus japonicus HOM05D005962 ORTHO05D007325 2.3e-104 382.5 230 81.7
TWI12G1051 Tripterygium wilfordii HOM05D005962 ORTHO05D007325 3.0e-104 382.1 227 82.8
Duzib192G0276 Durio zibethinus HOM05D005962 ORTHO05D007325 6.6e-104 380.9 227 81.9
Psat4g195960 Pisum sativum HOM05D005962 ORTHO05D007325 8.6e-104 380.6 227 80.2
Atru.chr12.732 Acer truncatum HOM05D005962 ORTHO05D007325 1.1e-103 380.2 227 82.4
DCAR_007600 Daucus carota HOM05D005962 ORTHO05D007325 3.3e-103 378.6 227 81.1
CANSAT21G1984 Cannabis sativa HOM05D005962 ORTHO05D007325 4.3e-103 378.3 228 80.7
arahy.Tifrunner.gnm1.ann1.FEFU12 Arachis hypogaea HOM05D005962 ORTHO05D007325 7.3e-103 377.5 225 81.8
Lalb_Chr01g0013231 Lupinus albus HOM05D005962 ORTHO05D007325 7.3e-103 377.5 227 79.7
ECA248G1573 Erigeron canadensis HOM05D005962 ORTHO05D007325 1.2e-102 376.7 219 82.2
Gohir.A10G063800 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.2e-102 376.7 227 81.1
Sed0025844 Sechium edule HOM05D005962 ORTHO05D007325 2.1e-102 375.9 227 82.4
Gorai.011G069400 Gossypium raimondii HOM05D005962 ORTHO05D007325 2.8e-102 375.6 227 81.1
CsaV3_3G023410 Cucumis sativus L. HOM05D005962 ORTHO05D007325 3.6e-102 375.2 226 83.2
Gohir.D10G065400 Gossypium hirsutum HOM05D005962 ORTHO05D007325 3.6e-102 375.2 227 81.1
Medtr8g015230 Medicago truncatula HOM05D005962 ORTHO05D007325 3.6e-102 375.2 227 80.2
ClCG07G013490 Citrullus lanatus HOM05D005962 ORTHO05D007325 4.7e-102 374.8 227 82.8
arahy.Tifrunner.gnm1.ann1.M52QXX Arachis hypogaea HOM05D005962 ORTHO05D007325 6.2e-102 374.4 225 81.3
Manes.11G030300 Manihot esculenta HOM05D005962 ORTHO05D007325 6.2e-102 374.4 227 81.9
CAN.G1143.30 Capsicum annuum HOM05D005962 ORTHO05D007325 8.1e-102 374.0 225 80.9
Oeu024256.1 Olea europaea HOM05D005962 ORTHO05D007325 1.8e-101 372.9 227 82.4
Solyc12g044640.2 Solanum lycopersicum HOM05D005962 ORTHO05D007325 3.1e-101 372.1 225 80.9
Lsat_1_v5_gn_5_181040 Lactuca sativa HOM05D005962 ORTHO05D007325 5.2e-101 371.3 218 82.1
SalBow6G5073 Salvia bowleyana HOM05D005962 ORTHO05D007325 6.8e-101 370.9 225 80.9
Peaxi162Scf00038g01151 Petunia axillaris HOM05D005962 ORTHO05D007325 2.6e-100 369.0 225 80.0
Manes.04G136400 Manihot esculenta HOM05D005962 ORTHO05D007325 5.8e-100 367.9 227 81.9
PSO210G0258 Papaver somniferum HOM05D005962 ORTHO05D007325 9.9e-100 367.1 226 79.2
Eucgr.J02602 Eucalyptus grandis HOM05D005962 ORTHO05D007325 2.9e-99 365.5 227 80.6
MSTRG.11013 Avicennia marina HOM05D005962 ORTHO05D007325 3.8e-99 365.2 227 79.3
Migut.I00971 Erythranthe guttata HOM05D005962 ORTHO05D007325 3.8e-99 365.2 226 80.5
MELO3C013015.2 Cucumis melo HOM05D005962 ORTHO05D007325 4.9e-99 364.8 254 74.8
Hma1.2p1_0764F.1_g214960 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 4.9e-99 364.8 227 80.6
PGSC0003DMG400026839 Solanum tuberosum HOM05D005962 ORTHO05D007325 8.4e-99 364.0 225 80.4
Nitab4.5_0002423g0030 Nicotiana tabacum HOM05D005962 ORTHO05D007325 1.9e-98 362.8 225 80.9
Hma1.2p1_2308F.1_g319480 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 2.4e-98 362.5 227 80.2
PSO210G7608 Papaver somniferum HOM05D005962 ORTHO05D007325 4.2e-98 361.7 226 77.9
PGSC0003DMG401002516 Solanum tuberosum HOM05D005962 ORTHO05D007325 4.2e-98 361.7 225 79.1
Sopen12g023060 Solanum pennellii HOM05D005962 ORTHO05D007325 5.4e-98 361.3 225 79.6
Ca_23283_v3 Cicer arietinum L. HOM05D005962 ORTHO05D007325 2.7e-97 359.0 231 77.9
EL10Ac3g07358 Beta vulgaris HOM05D005962 ORTHO05D007325 6.0e-97 357.8 227 78.0
Sc19g0007830 Simmondsia chinensis HOM05D005962 ORTHO05D007325 7.8e-97 357.5 226 77.4
Sopen03g040020 Solanum pennellii HOM05D005962 ORTHO05D007325 1.5e-95 353.2 225 78.2
RcHm_v2.0_Chr2g0141751 Rosa chinensis HOM05D005962 ORTHO05D007325 4.3e-95 351.7 227 75.3
Dinv37956 Davidia involucrata HOM05D005962 ORTHO05D007325 5.6e-95 351.3 193 88.6
HPP92_007682 Vanilla planifolia HOM05D005962 ORTHO05D007325 9.6e-95 350.5 226 76.1
Nitab4.5_0001172g0180 Nicotiana tabacum HOM05D005962 ORTHO05D007325 4.8e-94 348.2 226 78.3
PGR102G2175 Punica granatum HOM05D005962 ORTHO05D007325 8.1e-94 347.4 227 74.0
FvH4_6g32730 Fragaria vesca HOM05D005962 ORTHO05D007325 1.1e-93 347.1 227 74.9
HanXRQChr15g0489361 Helianthus annuus HOM05D005962 ORTHO05D007325 3.4e-92 342.0 226 75.7
FAN05G1114 Fragaria x ananassa HOM05D005962 ORTHO05D007325 5.8e-92 341.3 227 73.6
FAN02G1749 Fragaria x ananassa HOM05D005962 ORTHO05D007325 2.2e-91 339.3 227 72.7
AUR62020986 Chenopodium quinoa HOM05D005962 ORTHO05D007325 2.4e-90 335.9 227 73.6
FAN09G1055 Fragaria x ananassa HOM05D005962 ORTHO05D007325 7.1e-90 334.3 227 71.8
Aa31LG8G8050 Aethionema arabicum HOM05D005962 ORTHO05D007325 2.1e-89 332.8 227 73.6
Sp3g19410 Schrenkiella parvula HOM05D005962 ORTHO05D007325 3.5e-89 332.0 227 73.1
SHI11207 Sapria himalayana HOM05D005962 ORTHO05D007325 1.7e-88 329.7 228 72.4
unitig_32.g10986 Utricularia gibba HOM05D005962 ORTHO05D007325 2.3e-88 329.3 227 72.2
Os06g0217500 Oryza sativa ssp. japonica HOM05D005962 ORTHO05D007325 5.1e-88 328.2 226 71.7
THA.LOC104805924 Tarenaya hassleriana HOM05D005962 ORTHO05D007325 5.1e-88 328.2 227 74.0
AUR62018448 Chenopodium quinoa HOM05D005962 ORTHO05D007325 1.9e-87 326.2 227 71.8
AL3G35400 Arabidopsis lyrata HOM05D005962 ORTHO05D007325 1.3e-86 323.6 227 72.2
Carub.0003s2138 Capsella rubella HOM05D005962 ORTHO05D007325 8.1e-86 320.9 227 71.4
Solyc03g121210.4 Solanum lycopersicum HOM05D005962 ORTHO05D007325 1.1e-85 320.5 187 81.8
Zm00001eb372970 Zea mays HOM05D005962 ORTHO05D007325 1.8e-85 319.7 226 71.2
CARHR097270 Cardamine hirsuta HOM05D005962 ORTHO05D007325 4.0e-85 318.5 227 70.9
Thhalv10021373m.g Eutrema salsugineum HOM05D005962 ORTHO05D007325 1.2e-84 317.0 227 70.9
AT3G21350 Arabidopsis thaliana HOM05D005962 ORTHO05D007325 2.2e-83 312.8 227 70.9
BcaB06g26231 Brassica carinata HOM05D005962 ORTHO05D007325 3.8e-83 312.0 228 70.2
Gohir.A01G226000 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.1e-82 310.5 173 86.1
C05p42110 Brassica napus HOM05D005962 ORTHO05D007325 7.1e-82 307.8 228 69.3
SGA_v2.0_scaffold45G16998 Striga asiatica HOM05D005962 ORTHO05D007325 2.1e-81 306.2 174 82.8
BcaC05g28175 Brassica carinata HOM05D005962 ORTHO05D007325 2.7e-81 305.8 227 67.4
A05p27250 Brassica napus HOM05D005962 ORTHO05D007325 2.7e-81 305.8 228 69.3
BraA05t21615Z Brassica rapa HOM05D005962 ORTHO05D007325 1.1e-79 300.4 238 66.8
BolC5t32941H Brassica oleracea HOM05D005962 ORTHO05D007325 2.6e-76 289.3 265 59.6
TPR.G39766 Trifolium pratense HOM05D005962 ORTHO05D007325 1.0e-75 287.3 185 77.3
Lj5A50T68 Lonicera japonica HOM05D005962 ORTHO05D007325 5.5e-74 281.6 171 82.5
Cfa019373 Carpinus fangiana HOM05D005962 ORTHO05D007325 1.2e-73 280.4 171 82.5
Cpa.g.sc131.1 Carica papaya HOM05D005962 ORTHO05D007325 2.4e-69 266.2 136 89.0
ATR0705G221 Amborella trichopoda HOM05D005962 ORTHO05D007325 9.0e-69 264.2 136 91.2
Migut.I00969 Erythranthe guttata HOM05D005962 ORTHO05D007325 1.2e-68 263.8 137 88.3
Migut.O00801 Erythranthe guttata HOM05D005962 ORTHO05D007325 3.4e-68 262.3 136 88.2
Pp3c11_22580 Physcomitrium patens HOM05D005962 ORTHO05D007325 7.9e-65 251.1 238 58.8
Ah.04g150140 Amaranthus hybridus HOM05D005962 ORTHO05D007325 6.7e-64 248.1 136 84.6
MD14G1079700 Malus domestica HOM05D005962 ORTHO05D007325 1.1e-63 247.3 169 76.9
AagrBONN_evm.TU.Sc2ySwM_362.1658 Anthoceros agrestis HOM05D005962 ORTHO05D007325 1.2e-60 237.3 197 61.4
Mapoly0012s0176 Marchantia polymorpha HOM05D005962 ORTHO05D007325 6.5e-59 231.5 234 54.3
SMO143G0120 Selaginella moellendorffii HOM05D005962 ORTHO05D007325 2.1e-57 226.5 183 60.7
CBR_g22489 Chara braunii HOM05D005962 ORTHO05D007325 6.5e-43 178.3 222 46.4
Medtr0361s0030 Medicago truncatula HOM05D005962 ORTHO05D007325 7.5e-39 164.9 103 77.7
QL05p018100 Quercus lobata HOM05D005962 ORTHO05D007325 9.1e-37 157.9 93 84.9
Lj3g0016976 Lotus japonicus HOM05D005962 ORTHO05D007325 6.1e-33 145.2 146 56.8
SEGI_18792 Sequoiadendron giganteum HOM05D005962 ORTHO05D007325 3.4e-31 139.4 80 80.0
TAR624G0741 Trochodendron aralioides HOM05D005962 ORTHO05D007325 1.3e-30 137.5 145 56.6
Dinv30416 Davidia involucrata HOM05D005962 ORTHO05D007325 3.2e-26 122.9 183 43.2
Lj5C50T14 Lonicera japonica HOM05D005962 ORTHO05D007325 1.6e-25 120.6 55 92.7
RcHm_v2.0_Chr5g0064381 Rosa chinensis HOM05D005962 ORTHO05D007325 5.2e-24 115.5 85 63.5
Lsat_1_v5_gn_2_99820 Lactuca sativa HOM05D005962 ORTHO05D007325 2.6e-23 113.2 64 79.7
Ah.04g150130 Amaranthus hybridus HOM05D000535 ORTHO05D000427 1.7e-22 110.5 90 64.4
TAR623G1541 Trochodendron aralioides HOM05D005962 ORTHO05D007325 1.7e-22 110.5 58 91.4
Cfa019374 Carpinus fangiana HOM05D005962 ORTHO05D007325 6.3e-22 108.6 47 97.9
Nitab4.5_0008212g0010 Nicotiana tabacum HOM05D005962 ORTHO05D007325 1.4e-16 90.9 189 38.1
PRCOL_00006676 Prasinoderma coloniale HOM05D001184 ORTHO05D008450 2.3e-16 90.1 128 38.3
Zm00001eb084330 Zea mays HOM05D005962 ORTHO05D007325 2.3e-16 90.1 59 71.2
Pp3c7_2870 Physcomitrium patens HOM05D005962 ORTHO05D007325 5.2e-16 89.0 229 35.8
Zm00001eb192830 Zea mays HOM05D005962 ORTHO05D007325 1.5e-15 87.4 58 69.0
BraA09t39590Z Brassica rapa HOM05D002393 ORTHO05D002845 5.9e-12 75.5 64 59.4
Cpa.g.c26718.1 Carica papaya HOM05D005962 ORTHO05D007325 6.6e-11 72.0 54 70.4
Dinv30417 Davidia involucrata HOM05D000106 ORTHO05D000160 6.6e-11 72.0 60 68.3
TAR636G3265 Trochodendron aralioides HOM05D005962 ORTHO05D007325 5.2e-08 62.4 29 89.7
C09p14660 Brassica napus HOM05D017738 ORTHO05D042708 2.2e-06 57.0 93 37.6
BolC9t54371H Brassica oleracea HOM05D017738 ORTHO05D042708 2.2e-06 57.0 93 37.6
Cfa023417 Carpinus fangiana HOM05D005962 ORTHO05D123568 2.9e-06 56.6 172 28.5


User provided reference genes

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