Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 0.0e+00 2390.5 1201 100.0
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 0.0e+00 1786.9 1326 68.9
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 0.0e+00 1749.6 1328 68.1
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 0.0e+00 1748.0 1321 68.1
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 0.0e+00 1746.5 1316 68.2
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1740.7 1329 67.2
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 0.0e+00 1725.7 1321 67.3
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 0.0e+00 1709.1 1325 66.5
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 0.0e+00 1708.3 1330 65.9
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 0.0e+00 1697.6 1317 66.4
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 0.0e+00 1695.2 1326 66.4
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 0.0e+00 1684.1 1323 66.4
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1684.1 1325 65.5
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1671.4 1323 65.6
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1670.2 1323 65.5
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 0.0e+00 1670.2 1325 65.5
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 0.0e+00 1667.9 1323 65.4
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1667.1 1323 65.4
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1664.4 1325 65.1
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 0.0e+00 1663.7 1321 64.6
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1660.6 1322 65.7
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1656.7 1323 65.0
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 0.0e+00 1655.6 1319 63.7
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1653.3 1242 68.9
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1652.9 1324 64.5
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 0.0e+00 1647.9 1325 64.6
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1640.9 1325 64.5
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 0.0e+00 1637.5 1321 64.7
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 0.0e+00 1634.0 1323 64.2
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 0.0e+00 1628.6 1322 63.5
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 0.0e+00 1620.9 1322 63.0
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 0.0e+00 1617.8 1323 63.0
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 0.0e+00 1615.1 1321 62.9
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 0.0e+00 1611.7 1274 64.2
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1608.6 1322 63.3
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1607.8 1320 63.1
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1607.8 1347 61.8
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 0.0e+00 1605.5 1333 62.3
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 0.0e+00 1603.6 1337 63.0
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 0.0e+00 1597.4 1325 62.1
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 0.0e+00 1595.9 1323 61.5
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 0.0e+00 1595.1 1313 62.6
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1575.8 1331 60.6
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1573.1 1326 60.9
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1572.0 1241 65.4
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 0.0e+00 1571.2 1321 61.1
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 0.0e+00 1569.7 1323 61.5
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1567.7 1241 65.6
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 0.0e+00 1567.0 1325 62.0
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 0.0e+00 1561.6 1322 60.7
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 0.0e+00 1559.7 1318 61.1
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 0.0e+00 1559.3 1326 60.9
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1555.8 1325 60.4
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 0.0e+00 1555.0 1321 61.3
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 0.0e+00 1548.5 1323 60.7
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 0.0e+00 1544.6 1453 57.0
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 0.0e+00 1541.6 1241 63.7
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 0.0e+00 1537.3 1339 60.4
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 0.0e+00 1533.9 1318 59.6
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1533.9 1329 60.5
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 0.0e+00 1533.9 1320 60.3
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 0.0e+00 1532.7 1267 61.9
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 0.0e+00 1524.2 1269 62.1
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 0.0e+00 1516.9 1197 66.3
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 0.0e+00 1514.6 1326 59.8
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1511.9 1339 59.1
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 0.0e+00 1494.9 1321 59.6
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 0.0e+00 1483.8 1316 58.6
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 0.0e+00 1465.7 1314 58.1
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 0.0e+00 1459.1 1306 59.0
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 0.0e+00 1456.4 1321 57.5
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 0.0e+00 1449.1 1319 58.6
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 0.0e+00 1448.0 1326 57.3
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 0.0e+00 1447.2 1321 57.7
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1446.0 1094 68.7
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1445.6 1321 57.1
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 0.0e+00 1442.6 1321 57.7
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 0.0e+00 1439.9 1324 56.7
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1438.7 1324 56.7
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 0.0e+00 1438.3 1326 56.8
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 0.0e+00 1435.6 1321 57.3
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 0.0e+00 1429.8 1314 57.8
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1417.9 1190 60.7
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 0.0e+00 1412.5 1103 65.5
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 0.0e+00 1391.3 1354 54.6
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 0.0e+00 1351.3 1320 55.1
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 0.0e+00 1333.5 1336 52.4
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1317.0 1126 61.2
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 0.0e+00 1308.1 1109 60.3
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 0.0e+00 1284.6 1321 50.4
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 0.0e+00 1269.2 1264 56.1
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 0.0e+00 1267.3 1094 60.1
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 0.0e+00 1259.2 1159 58.0
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 0.0e+00 1229.9 1327 50.9
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 0.0e+00 1221.5 1343 49.5
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 0.0e+00 1139.0 940 62.8
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 0.0e+00 1096.6 1298 49.2
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 3.3e-311 1072.0 865 65.4
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 9.9e-308 1060.4 901 60.4
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 1.3e-294 1016.9 1251 45.9
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 4.2e-290 1001.9 725 71.6
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 2.2e-222 776.9 1360 35.8
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 2.1e-217 760.4 797 50.1
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 1.8e-208 730.7 1241 36.4
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 1.9e-202 710.7 1148 38.4
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 8.4e-198 695.3 1160 37.8
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 3.5e-188 663.3 770 49.1
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 6.3e-145 519.6 357 75.4
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 5.3e-136 490.0 449 58.6
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea HOM05D006356 ORTHO05D007903 2.9e-134 484.2 376 64.4
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 1.9e-133 481.5 1490 28.4
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 4.4e-98 364.0 313 61.3
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 9.9e-82 309.7 249 60.2
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 5.8e-74 283.9 196 78.1
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 5.8e-74 283.9 1350 25.5
Psat2g034240 Pisum sativum HOM05D006356 ORTHO05D007903 1.9e-64 252.3 269 49.8
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 7.1e-64 250.4 1285 25.5
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 2.7e-63 248.4 1529 23.6
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 1.8e-59 235.7 167 77.2
Psat0s3149g0080 Pisum sativum HOM05D006356 ORTHO05D007903 3.0e-46 191.8 147 61.9
Psat0s3149g0040 Pisum sativum HOM05D006356 ORTHO05D007903 3.3e-45 188.3 147 60.5
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 1.0e-33 150.2 1354 23.0
AUR62038375 Chenopodium quinoa HOM05D006356 ORTHO05D007903 1.2e-31 143.3 136 57.4
Lj5g0016728 Lotus japonicus HOM05D006356 ORTHO05D007903 6.7e-30 137.5 289 38.8
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 1.7e-20 106.3 65 78.5
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 1.2e-18 100.1 56 83.9


User provided reference genes

Program Settings