Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01016051001 Vitis vinifera HOM05D006268 ORTHO05D008118 1.5e-189 666.0 331 100.0
Cfa010996 Carpinus fangiana HOM05D006268 ORTHO05D008118 3.3e-144 515.4 331 76.4
Haze_02942 Corylus avellana HOM05D006268 ORTHO05D008118 4.7e-143 511.5 331 75.8
Actinidia33290 Actinidia chinensis HOM05D006268 ORTHO05D008118 1.4e-142 510.0 334 74.9
CSS0005578 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 3.4e-141 505.4 329 75.7
TAR375G0229 Trochodendron aralioides HOM05D006268 ORTHO05D008118 7.6e-141 504.2 330 75.8
Potri.002G238300 Populus trichocarpa HOM05D006268 ORTHO05D008118 2.9e-140 502.3 330 74.2
MSTRG.4977 Avicennia marina HOM05D006268 ORTHO05D008118 8.4e-140 500.7 331 74.0
RcHm_v2.0_Chr1g0341291 Rosa chinensis HOM05D006268 ORTHO05D008118 4.1e-139 498.4 330 74.5
Sabra02G0181600 Salix brachista HOM05D006268 ORTHO05D008118 5.4e-139 498.0 327 74.3
CiPaw.13G019100 Carya illinoinensis HOM05D006268 ORTHO05D008118 2.7e-138 495.7 333 74.5
MD00G1098400 Malus domestica HOM05D006268 ORTHO05D008118 2.7e-138 495.7 330 73.6
Sed0013667 Sechium edule HOM05D006268 ORTHO05D008118 7.8e-138 494.2 329 74.5
TWI59G0917 Tripterygium wilfordii HOM05D006268 ORTHO05D008118 1.0e-137 493.8 329 74.8
FAN03G0807 Fragaria x ananassa HOM05D006268 ORTHO05D008118 1.7e-137 493.0 331 72.8
FAN06G0712 Fragaria x ananassa HOM05D006268 ORTHO05D008118 5.1e-137 491.5 331 72.8
MELO3C006233.2 Cucumis melo HOM05D006268 ORTHO05D008118 6.6e-137 491.1 330 74.5
CsaV3_3G010120 Cucumis sativus L. HOM05D006268 ORTHO05D008118 1.5e-136 490.0 330 74.2
FvH4_7g08020 Fragaria vesca HOM05D006268 ORTHO05D008118 9.6e-136 487.3 331 72.8
Rhsim01G0145800 Rhododendron simsii HOM05D006268 ORTHO05D008118 3.6e-135 485.3 331 72.2
vmacro21105 Vaccinium macrocarpon HOM05D006268 ORTHO05D008118 8.1e-135 484.2 331 71.6
Eucgr.D01130 Eucalyptus grandis HOM05D006268 ORTHO05D008118 1.1e-134 483.8 331 71.6
Prupe.2G109200 Prunus persica HOM05D006268 ORTHO05D008118 1.1e-134 483.8 330 70.6
Thecc.03G001300 Theobroma cacao HOM05D006268 ORTHO05D008118 5.2e-134 481.5 331 71.9
DCAR_029548 Daucus carota HOM05D006268 ORTHO05D008118 6.8e-134 481.1 330 72.4
Gohir.A06G169600 Gossypium hirsutum HOM05D006268 ORTHO05D008118 8.9e-134 480.7 331 71.9
CANSAT54G1338 Cannabis sativa HOM05D006268 ORTHO05D008118 1.2e-133 480.3 334 73.1
CAN.G1551.1 Capsicum annuum HOM05D006268 ORTHO05D008118 1.2e-133 480.3 331 72.2
Solyc01g080940.3 Solanum lycopersicum HOM05D006268 ORTHO05D008118 1.2e-133 480.3 331 73.4
Nitab4.5_0001209g0060 Nicotiana tabacum HOM05D006268 ORTHO05D008118 5.8e-133 478.0 331 71.6
Sopen01g032530 Solanum pennellii HOM05D006268 ORTHO05D008118 9.9e-133 477.2 334 73.1
Duzib128G0100 Durio zibethinus HOM05D006268 ORTHO05D008118 1.3e-132 476.9 344 69.5
Ciclev10021110m.g Citrus clementina HOM05D006268 ORTHO05D008118 6.4e-132 474.6 331 71.9
Cc02_g26120 Coffea canephora HOM05D006268 ORTHO05D008118 1.9e-131 473.0 333 71.8
VMungo0331G0592 Vigna mungo HOM05D006268 ORTHO05D008118 1.9e-131 473.0 330 71.5
COL.COLO4_19510 Corchorus olitorius HOM05D006268 ORTHO05D006513 2.4e-131 472.6 332 70.2
Nitab4.5_0001476g0040 Nicotiana tabacum HOM05D006268 ORTHO05D008118 3.2e-131 472.2 331 71.3
Glyma.03G093200 Glycine max HOM05D006268 ORTHO05D008118 4.2e-131 471.9 330 70.6
Gorai.N008000 Gossypium raimondii HOM05D006268 ORTHO05D008118 5.4e-131 471.5 331 71.3
QL04p024264 Quercus lobata HOM05D006268 ORTHO05D008118 5.4e-131 471.5 354 68.4
PGSC0003DMG400001820 Solanum tuberosum HOM05D006268 ORTHO05D008118 1.2e-130 470.3 331 71.0
PGR083G0810 Punica granatum HOM05D006268 ORTHO05D008118 1.6e-130 469.9 331 70.4
Sc26g0001930 Simmondsia chinensis HOM05D006268 ORTHO05D008118 1.6e-130 469.9 332 70.5
FAN01G0355 Fragaria x ananassa HOM05D006268 ORTHO05D008118 2.1e-130 469.5 373 63.8
Migut.N01815 Erythranthe guttata HOM05D006268 ORTHO05D008118 3.5e-130 468.8 332 70.8
Lj3g0019214 Lotus japonicus HOM05D006268 ORTHO05D008118 4.6e-130 468.4 330 70.0
SalBow4G0743 Salvia bowleyana HOM05D006268 ORTHO05D008118 7.8e-130 467.6 332 70.8
Nn1g00551 Nelumbo nucifera HOM05D006268 ORTHO05D008118 1.7e-129 466.5 332 70.5
Lalb_Chr07g0194551 Lupinus albus HOM05D006268 ORTHO05D008118 2.3e-129 466.1 330 69.4
Ca_23170_v3 Cicer arietinum L. HOM05D006268 ORTHO05D008118 3.9e-129 465.3 330 69.7
Glyma.16G080700 Glycine max HOM05D006268 ORTHO05D008118 6.6e-129 464.5 330 69.7
Phvul.010G033866 Phaseolus vulgaris HOM05D006268 ORTHO05D008118 6.6e-129 464.5 330 69.1
CSS0033423 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 4.3e-128 461.8 329 70.8
PSO063G1446 Papaver somniferum HOM05D006268 ORTHO05D008118 5.6e-128 461.5 331 69.2
PSO782G1498 Papaver somniferum HOM05D006268 ORTHO05D008118 1.4e-126 456.8 331 68.3
Psat4g207400 Pisum sativum HOM05D006268 ORTHO05D008118 6.9e-126 454.5 330 68.2
HanXRQChr04g0123661 Helianthus annuus HOM05D006268 ORTHO05D008118 7.6e-125 451.1 330 67.6
Aqoxy3G02409 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 9.9e-125 450.7 332 68.1
Aqoxy3G02437 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 9.9e-125 450.7 332 68.1
ClCG05G002670 Citrullus lanatus HOM05D006268 ORTHO05D008118 1.9e-123 446.4 330 68.8
Atru.BG.53.p Acer truncatum HOM05D006268 ORTHO05D008118 2.1e-122 443.0 322 71.4
EL10Ac1g00692 Beta vulgaris HOM05D006268 ORTHO05D008118 3.5e-122 442.2 331 64.4
Ah.06g189690 Amaranthus hybridus HOM05D006268 ORTHO05D008118 7.9e-122 441.0 347 62.5
Hund26937 Selenicereus undatus HOM05D006268 ORTHO05D008118 5.1e-121 438.3 331 65.6
AUR62023342 Chenopodium quinoa HOM05D006268 ORTHO05D008118 1.1e-120 437.2 331 63.7
Lsat_1_v5_gn_7_10860 Lactuca sativa HOM05D006268 ORTHO05D008118 1.6e-119 433.3 328 67.1
Medtr8g010550 Medicago truncatula HOM05D006268 ORTHO05D008118 4.0e-118 428.7 333 64.6
unitig_22.g5778 Utricularia gibba HOM05D006268 ORTHO05D008118 3.3e-112 409.1 330 64.8
arahy.Tifrunner.gnm1.ann1.V3PJPX Arachis hypogaea HOM05D006268 ORTHO05D008118 9.6e-112 407.5 330 63.6
arahy.Tifrunner.gnm1.ann1.EHLP6C Arachis hypogaea HOM05D006268 ORTHO05D008118 2.8e-111 406.0 330 63.3
ATR0049G059 Amborella trichopoda HOM05D006268 ORTHO05D008118 3.7e-111 405.6 335 60.0
Manes.08G055700 Manihot esculenta HOM05D006268 ORTHO05D008118 1.8e-110 403.3 290 69.3
Os03g0390700 Oryza sativa ssp. japonica HOM05D006268 ORTHO05D008118 4.0e-110 402.1 331 62.5
A02p07860 Brassica napus HOM05D006268 ORTHO05D008118 1.1e-107 394.0 331 61.3
BcaB05g22409 Brassica carinata HOM05D006268 ORTHO05D008118 1.9e-107 393.3 331 60.7
BraA02t05859Z Brassica rapa HOM05D006268 ORTHO05D008118 3.2e-107 392.5 331 61.0
Thhalv10014126m.g Eutrema salsugineum HOM05D006268 ORTHO05D008118 9.3e-107 391.0 331 60.7
BcaC03g14111 Brassica carinata HOM05D006268 ORTHO05D008118 1.6e-106 390.2 331 61.0
THA.LOC104799599 Tarenaya hassleriana HOM05D006268 ORTHO05D008118 1.6e-106 390.2 332 60.2
C02p13500 Brassica napus HOM05D006268 ORTHO05D008118 2.7e-106 389.4 331 61.0
BolC2t07462H Brassica oleracea HOM05D006268 ORTHO05D008118 2.7e-106 389.4 331 61.0
TPR.G9770 Trifolium pratense HOM05D006268 ORTHO05D008118 3.9e-105 385.6 331 58.6
Aa31LG11G10 Aethionema arabicum HOM05D006268 ORTHO05D008118 1.5e-104 383.6 331 58.6
HPP92_028001 Vanilla planifolia HOM05D006268 ORTHO05D008118 2.1e-103 379.8 330 58.5
AUR62013813 Chenopodium quinoa HOM05D006268 ORTHO05D008118 6.3e-103 378.3 331 57.4
AL8G34320 Arabidopsis lyrata HOM05D006268 ORTHO05D008118 4.1e-102 375.6 329 58.7
Sp6g19880 Schrenkiella parvula HOM05D006268 ORTHO05D008118 9.0e-102 374.4 327 59.0
Zm00001eb392560 Zea mays HOM05D006268 ORTHO05D008118 2.6e-101 372.9 330 58.5
Dinv43994 Davidia involucrata HOM05D006268 ORTHO05D008118 5.9e-101 371.7 239 79.9
FAN10G2079 Fragaria x ananassa HOM05D006268 ORTHO05D008118 7.6e-101 371.3 302 65.6
SEGI_16160 Sequoiadendron giganteum HOM05D006268 ORTHO05D008118 7.2e-99 364.8 348 55.7
CARHR272020 Cardamine hirsuta HOM05D006268 ORTHO05D008118 2.3e-97 359.8 329 57.8
ECA236G2174 Erigeron canadensis HOM05D006268 ORTHO05D008118 3.9e-97 359.0 304 61.2
AT5G58220 Arabidopsis thaliana HOM05D006268 ORTHO05D008118 7.4e-96 354.8 329 57.1
Carub.0008s1876 Capsella rubella HOM05D006268 ORTHO05D008118 9.7e-96 354.4 329 57.1
Pp3c4_10360 Physcomitrium patens HOM05D006268 ORTHO05D008118 1.0e-81 307.8 338 50.6
SGA_v2.0_scaffold95G28736 Striga asiatica HOM05D006268 ORTHO05D008118 1.4e-81 307.4 246 64.2
CDE04G2879 Ceratophyllum demersum HOM05D006268 ORTHO05D008118 1.1e-80 304.3 272 58.5
SMO367G0371 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 2.4e-78 296.6 362 46.1
Mapoly0090s0043 Marchantia polymorpha HOM05D006268 ORTHO05D008118 4.1e-70 269.2 343 43.1
Lj7C555G14 Lonicera japonica HOM05D006268 ORTHO05D008118 6.5e-68 261.9 176 74.4
AagrBONN_evm.TU.Sc2ySwM_228.2734 Anthoceros agrestis HOM05D006268 ORTHO05D008118 6.8e-65 251.9 313 45.7
CBR_g30589 Chara braunii HOM05D006268 ORTHO05D008118 7.0e-62 241.9 464 34.9
Lj7C555T10 Lonicera japonica HOM05D006268 ORTHO05D008118 4.0e-57 226.1 150 74.0
PRCOL_00004243 Prasinoderma coloniale HOM05D006268 ORTHO05D008118 4.4e-56 222.6 336 40.5
BcaB05g22411 Brassica carinata HOM05D006268 ORTHO05D008118 3.1e-54 216.5 190 59.5
Cre17.g735950 Chlamydomonas reinhardtii HOM05D006268 ORTHO05D008118 3.5e-53 213.0 339 37.5
DCAR_025012 Daucus carota HOM05D006268 ORTHO05D008118 1.0e-52 211.5 176 63.1
Cpa.g.sc74.89 Carica papaya HOM05D006268 ORTHO05D008118 4.3e-43 179.5 177 57.1
SMO197G0011 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 7.0e-38 162.2 147 55.1
Sc26g0001910 Simmondsia chinensis HOM05D006268 ORTHO05D008118 7.0e-38 162.2 149 56.4
SMO367G0431 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 7.8e-37 158.7 156 51.9
SHI28983 Sapria himalayana HOM05D006268 ORTHO05D008118 2.5e-35 153.7 156 51.3
MCO07G440 Micromonas commoda HOM05D006268 ORTHO05D008118 9.8e-32 141.7 150 47.3
BolC9t57859H Brassica oleracea HOM05D006268 ORTHO05D008118 7.3e-27 125.6 81 69.1
Oeu050272.1 Olea europaea HOM05D006268 ORTHO05D008118 5.8e-24 115.9 71 71.8
Hma1.2p1_0076F.1_g039600 Hydrangea macrophylla HOM05D006268 ORTHO05D008118 2.7e-21 107.1 58 81.0
MCO05G065 Micromonas commoda HOM05D006268 ORTHO05D008118 2.5e-19 100.5 132 43.2
MD02G1236900 Malus domestica HOM05D006268 ORTHO05D008118 9.6e-19 98.6 133 46.6
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 2.4e-17 94.0 72 63.9
BcaC04g19902 Brassica carinata HOM05D006268 ORTHO05D008118 4.6e-13 79.7 57 59.6
Cfa010995 Carpinus fangiana HOM05D006268 ORTHO05D008118 1.7e-12 77.8 58 60.3
Dinv43550 Davidia involucrata HOM05D006268 ORTHO05D008118 1.4e-09 68.2 43 81.4
C09p50070 Brassica napus HOM05D006268 ORTHO05D008118 4.2e-06 56.6 81 42.0


User provided reference genes

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