Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01016007001 Vitis vinifera HOM05D006010 ORTHO05D007381 2.2e-138 495.7 277 100.0
GSVIVG01015998001 Vitis vinifera HOM05D006010 ORTHO05D007381 1.4e-124 449.9 264 92.4
GSVIVG01015997001 Vitis vinifera HOM05D006010 ORTHO05D007381 3.0e-122 442.2 339 75.2
GSVIVG01016005001 Vitis vinifera HOM05D006010 ORTHO05D007381 8.1e-88 327.8 196 90.3
Actinidia35721 Actinidia chinensis HOM05D006010 ORTHO05D007381 2.6e-70 269.6 281 59.4
Prupe.2G048000 Prunus persica HOM05D006010 ORTHO05D007381 2.9e-61 239.6 281 54.1
Rhsim10G0180400 Rhododendron simsii HOM05D006010 ORTHO05D007381 1.9e-60 236.9 279 53.8
MSTRG.15654 Avicennia marina HOM05D006010 ORTHO05D007381 1.3e-58 230.7 279 55.6
TWI53G0527 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 1.5e-57 227.3 281 53.0
MD02G1273300 Malus domestica HOM05D006010 ORTHO05D007381 7.4e-57 224.9 281 51.6
Peaxi162Scf00464g00430 Petunia axillaris HOM05D006010 ORTHO05D007381 7.4e-57 224.9 281 53.4
arahy.Tifrunner.gnm1.ann1.14A9Q3 Arachis hypogaea HOM05D006010 ORTHO05D007381 8.2e-56 221.5 282 55.0
Cpa.g.sc116.81 Carica papaya HOM05D006010 ORTHO05D007381 1.1e-55 221.1 317 47.9
arahy.Tifrunner.gnm1.ann1.RW4QB8 Arachis hypogaea HOM05D006010 ORTHO05D007381 3.1e-55 219.5 283 54.8
SalBow1G7757 Salvia bowleyana HOM05D006010 ORTHO05D007381 3.1e-55 219.5 280 51.1
Oeu048940.2 Olea europaea HOM05D006010 ORTHO05D007381 5.3e-55 218.8 275 57.1
PGSC0003DMG400013242 Solanum tuberosum HOM05D006010 ORTHO05D007381 5.3e-55 218.8 281 53.4
CiPaw.03G074500 Carya illinoinensis HOM05D006010 ORTHO05D007381 1.2e-54 217.6 281 52.3
Sabra17G0114300 Salix brachista HOM05D006010 ORTHO05D007381 3.4e-54 216.1 277 56.7
TWI74G0222 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 3.4e-54 216.1 273 53.1
Cc02_g11480 Coffea canephora HOM05D006010 ORTHO05D007381 1.0e-53 214.5 281 49.8
QL12p000853 Quercus lobata HOM05D006010 ORTHO05D007381 1.0e-53 214.5 326 47.5
arahy.Tifrunner.gnm1.ann1.ZG5C6W Arachis hypogaea HOM05D006010 ORTHO05D007381 1.7e-53 213.8 282 53.2
TPR.G23647 Trifolium pratense HOM05D006010 ORTHO05D007381 1.7e-53 213.8 278 51.8
Ca_05962_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 2.2e-53 213.4 278 51.4
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla HOM05D006010 ORTHO05D007381 2.9e-53 213.0 281 53.7
Manes.07G077600 Manihot esculenta HOM05D006010 ORTHO05D007381 3.8e-53 212.6 294 51.7
Sabra17G0111300 Salix brachista HOM05D006010 ORTHO05D007381 5.0e-53 212.2 286 54.9
Atru.chr11.39 Acer truncatum HOM05D006010 ORTHO05D007381 8.5e-53 211.5 276 54.3
Sopen11g006280 Solanum pennellii HOM05D006010 ORTHO05D007381 8.5e-53 211.5 281 53.0
Lj4g0009716 Lotus japonicus HOM05D006010 ORTHO05D007381 1.4e-52 210.7 277 50.9
CAN.G222.64 Capsicum annuum HOM05D006010 ORTHO05D007381 1.9e-52 210.3 281 51.2
Ciclev10026000m.g Citrus clementina HOM05D006010 ORTHO05D007381 1.9e-52 210.3 282 49.3
VMungo0464G0699 Vigna mungo HOM05D006010 ORTHO05D007381 1.9e-52 210.3 282 51.1
Cfa007784 Carpinus fangiana HOM05D006010 ORTHO05D007381 2.5e-52 209.9 281 53.0
Lalb_Chr10g0104261 Lupinus albus HOM05D006010 ORTHO05D007381 4.2e-52 209.1 281 51.6
Haze_14288 Corylus avellana HOM05D006010 ORTHO05D007381 5.5e-52 208.8 281 52.3
Actinidia28796 Actinidia chinensis HOM05D006010 ORTHO05D007381 6.1e-51 205.3 281 49.8
Phvul.004G098200 Phaseolus vulgaris HOM05D006010 ORTHO05D007381 1.4e-50 204.1 282 51.4
Nn3g17023 Nelumbo nucifera HOM05D006010 ORTHO05D007381 3.9e-50 202.6 294 46.9
Potri.017G135500 Populus trichocarpa HOM05D006010 ORTHO05D007381 3.9e-50 202.6 280 55.0
PGR004G1862 Punica granatum HOM05D006010 ORTHO05D007381 3.9e-50 202.6 283 50.2
RcHm_v2.0_Chr3g0492111 Rosa chinensis HOM05D006010 ORTHO05D007381 6.7e-50 201.8 285 48.4
FvH4_1g30030 Fragaria vesca HOM05D006010 ORTHO05D007381 8.8e-50 201.4 280 48.2
Psat2g045640 Pisum sativum HOM05D006010 ORTHO05D007381 2.0e-49 200.3 280 51.8
Eucgr.F02881 Eucalyptus grandis HOM05D006010 ORTHO05D007381 3.3e-49 199.5 281 51.6
FAN19G0427 Fragaria x ananassa HOM05D006010 ORTHO05D007381 4.3e-49 199.1 280 47.9
Duzib235G0102 Durio zibethinus HOM05D006010 ORTHO05D007381 9.7e-49 198.0 280 51.4
Medtr5g077800 Medicago truncatula HOM05D006010 ORTHO05D007381 4.8e-48 195.7 277 48.4
CsaV3_2G017210 Cucumis sativus L. HOM05D006010 ORTHO05D007381 1.4e-47 194.1 282 47.2
Sed0022983 Sechium edule HOM05D006010 ORTHO05D007381 1.4e-47 194.1 278 47.1
ECA236G4224 Erigeron canadensis HOM05D006010 ORTHO05D007381 2.4e-47 193.4 283 46.6
FAN28G0351 Fragaria x ananassa HOM05D006010 ORTHO05D007381 3.1e-47 193.0 287 47.0
FAN26G2228 Fragaria x ananassa HOM05D006010 ORTHO05D007381 4.1e-47 192.6 283 47.3
DCAR_014157 Daucus carota HOM05D006010 ORTHO05D007381 9.1e-47 191.4 247 53.4
MD07G1042200 Malus domestica HOM05D006010 ORTHO05D007381 4.5e-46 189.1 281 48.0
Migut.K00936 Erythranthe guttata HOM05D006010 ORTHO05D007381 2.9e-45 186.4 283 48.1
Sed0003139 Sechium edule HOM05D006010 ORTHO05D007381 5.0e-45 185.7 283 46.6
EL10Ac3g05516 Beta vulgaris HOM05D006010 ORTHO05D007381 8.5e-45 184.9 281 46.6
MELO3C020924.2 Cucumis melo HOM05D006010 ORTHO05D007381 8.5e-45 184.9 280 48.2
Hund11982 Selenicereus undatus HOM05D006010 ORTHO05D007381 1.6e-43 180.6 284 46.5
CANSAT01G2297 Cannabis sativa HOM05D006010 ORTHO05D007381 1.8e-42 177.2 307 44.3
ClCG05G010670 Citrullus lanatus HOM05D006010 ORTHO05D007381 1.8e-42 177.2 276 45.3
HanXRQChr15g0482991 Helianthus annuus HOM05D006010 ORTHO05D007381 6.7e-42 175.3 286 49.3
Lsat_1_v5_gn_3_65880 Lactuca sativa HOM05D006010 ORTHO05D007381 8.8e-42 174.9 281 44.5
FAN28G1345 Fragaria x ananassa HOM05D006010 ORTHO05D007381 3.3e-41 172.9 283 43.5
vmacro20589 Vaccinium macrocarpon HOM05D006010 ORTHO05D007381 9.7e-41 171.4 248 48.0
unitig_0.g1692 Utricularia gibba HOM05D006010 ORTHO05D007381 1.7e-40 170.6 282 44.0
AUR62016215 Chenopodium quinoa HOM05D006010 ORTHO05D007381 2.2e-40 170.2 284 47.5
Solyc11g011490.2 Solanum lycopersicum HOM05D006010 ORTHO05D007381 2.8e-40 169.9 228 49.6
Ca_05837_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 6.3e-40 168.7 196 59.2
Glyma.02G082600 Glycine max HOM05D006010 ORTHO05D007381 6.3e-40 168.7 282 44.7
Glyma.16G168300 Glycine max HOM05D006010 ORTHO05D007381 1.1e-39 167.9 282 48.6
TAR623G0083 Trochodendron aralioides HOM05D006010 ORTHO05D007381 1.6e-38 164.1 306 42.5
Sc22g0001300 Simmondsia chinensis HOM05D006010 ORTHO05D007381 1.0e-37 161.4 220 50.5
FAN23G2851 Fragaria x ananassa HOM05D006010 ORTHO05D007381 8.5e-37 158.3 283 41.7
Thecc.06G019600 Theobroma cacao HOM05D006010 ORTHO05D007381 9.4e-36 154.8 317 42.0
AUR62039273 Chenopodium quinoa HOM05D006010 ORTHO05D007381 1.4e-34 151.0 246 45.1
CDE09G0547 Ceratophyllum demersum HOM05D006010 ORTHO05D007381 8.8e-34 148.3 320 37.5
ATR0320G006 Amborella trichopoda HOM05D006010 ORTHO05D007381 2.0e-33 147.1 136 66.9
THA.LOC104827184 Tarenaya hassleriana HOM05D006010 ORTHO05D007381 4.4e-33 146.0 315 40.3
FAN25G0538 Fragaria x ananassa HOM05D006010 ORTHO05D007381 7.5e-33 145.2 158 54.4
SHI30126 Sapria himalayana HOM05D006010 ORTHO05D007381 9.7e-33 144.8 192 53.1
Ah.05g176710 Amaranthus hybridus HOM05D006010 ORTHO05D007381 8.2e-32 141.7 277 41.5
SGA_v2.0_scaffold115G32097 Striga asiatica HOM05D006010 ORTHO05D007381 5.0e-29 132.5 282 42.9
Os05g0495100 Oryza sativa ssp. japonica HOM05D006010 ORTHO05D007381 1.1e-28 131.3 306 37.9
Lj2A517G41 Lonicera japonica HOM05D006010 ORTHO05D007381 1.9e-28 130.6 176 47.2
Sed0026765 Sechium edule HOM05D006010 ORTHO05D007381 4.2e-28 129.4 162 51.9
Zm00001eb291600 Zea mays HOM05D006010 ORTHO05D007381 4.2e-28 129.4 273 42.1
Gohir.A10G157800 Gossypium hirsutum HOM05D006010 ORTHO05D007381 3.6e-27 126.3 362 37.0
Aqoxy3G00232 Aquilegia oxysepala HOM05D006010 ORTHO05D007381 6.8e-26 122.1 274 39.8
CSS0001849 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 1.2e-25 121.3 108 68.5
CSS0044569 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 1.2e-25 121.3 108 68.5
Gorai.011G090700 Gossypium raimondii HOM05D006010 ORTHO05D007381 1.7e-24 117.5 364 36.0
Sp3g01890 Schrenkiella parvula HOM05D006010 ORTHO05D007381 2.2e-24 117.1 281 42.7
COL.COLO4_31121 Corchorus olitorius HOM05D006010 ORTHO05D007381 2.8e-24 116.7 359 35.4
Lj2A517G40 Lonicera japonica HOM05D006010 ORTHO05D007381 5.4e-23 112.5 104 67.3
Gohir.D10G083400 Gossypium hirsutum HOM05D006010 ORTHO05D007381 7.0e-23 112.1 366 35.5
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 1.2e-22 111.3 178 43.3
BcaC05g30500 Brassica carinata HOM05D000919 ORTHO05D004442 1.5e-20 104.4 280 38.6
Nitab4.5_0011135g0050 Nicotiana tabacum HOM05D006010 ORTHO05D007381 3.6e-19 99.8 113 57.5
AL3G12280 Arabidopsis lyrata HOM05D006010 ORTHO05D007381 1.0e-18 98.2 206 37.4
C09p75990 Brassica napus HOM05D006010 ORTHO05D007381 2.6e-17 93.6 243 35.4
BolC5t35058H Brassica oleracea HOM05D006010 ORTHO05D007381 2.6e-17 93.6 243 35.4
CSS0015748 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 5.7e-17 92.4 105 51.4
CSS0044039 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 5.7e-17 92.4 105 51.4
Aa31LG5G13330 Aethionema arabicum HOM05D006010 ORTHO05D007381 9.8e-17 91.7 317 30.9
AT3G02860 Arabidopsis thaliana HOM05D006010 ORTHO05D007381 2.2e-16 90.5 207 36.2
Pp3c12_7630 Physcomitrium patens HOM05D006010 ORTHO05D007381 6.3e-16 89.0 91 53.8
Mapoly0044s0136 Marchantia polymorpha HOM05D006010 ORTHO05D007381 1.1e-15 88.2 277 35.4
AagrBONN_evm.TU.Sc2ySwM_369.381 Anthoceros agrestis HOM05D006010 ORTHO05D007381 1.4e-15 87.8 281 34.5
Thhalv10021193m.g Eutrema salsugineum HOM05D006010 ORTHO05D007381 2.4e-15 87.0 202 39.6
A05p44250 Brassica napus HOM05D006010 ORTHO05D007381 5.4e-15 85.9 206 37.4
BraA06t23281Z Brassica rapa HOM05D000919 ORTHO05D004442 5.4e-15 85.9 206 37.4
Carub.0003s0196 Capsella rubella HOM05D006010 ORTHO05D007381 3.5e-14 83.2 207 34.8
CARHR076870 Cardamine hirsuta HOM05D006010 ORTHO05D007381 3.5e-14 83.2 247 33.2
FAN21G0982 Fragaria x ananassa HOM05D006010 ORTHO05D007381 7.3e-12 75.5 158 34.8
CSS0035544 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 9.5e-12 75.1 90 51.1
PSO478G0898 Papaver somniferum HOM05D006010 ORTHO05D007381 1.6e-11 74.3 225 32.0
SEGI_17538 Sequoiadendron giganteum HOM05D006010 ORTHO05D007381 1.8e-10 70.9 178 30.9
CSS0039891 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 8.9e-10 68.6 80 57.5
PSO017G1892 Papaver somniferum HOM05D006010 ORTHO05D007381 7.5e-09 65.5 309 31.1
TPR.G36575 Trifolium pratense HOM05D006010 ORTHO05D007381 2.2e-08 63.9 92 44.6
CSS0027816 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 4.1e-07 59.7 86 45.3
Ca_05839_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 3.5e-06 56.6 72 48.6


User provided reference genes

Program Settings