Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 4.1e-270 934.1 464 100.0
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 1.0e-151 540.8 470 60.0
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 9.6e-142 507.7 472 57.4
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 2.4e-140 503.1 424 62.3
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 7.6e-139 498.0 483 56.3
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 9.9e-139 497.7 463 57.5
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 2.3e-135 486.5 467 56.7
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 3.9e-135 485.7 469 56.3
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 1.1e-134 484.2 469 55.7
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 1.5e-131 473.8 465 54.8
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 1.4e-129 467.2 466 55.4
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 2.1e-128 463.4 502 52.6
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 5.6e-126 455.3 495 52.1
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 9.6e-126 454.5 467 53.3
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 8.1e-125 451.4 497 51.5
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 3.4e-123 446.0 465 52.9
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 1.7e-122 443.7 469 51.4
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 8.4e-122 441.4 474 51.9
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 1.9e-118 430.3 460 50.7
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 3.7e-117 426.0 458 51.3
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 1.2e-115 421.0 488 49.6
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 7.6e-115 418.3 459 52.3
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 2.2e-114 416.8 458 51.3
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 9.3e-113 411.4 483 50.3
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 4.1e-108 396.0 472 47.0
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 6.9e-108 395.2 464 49.1
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 9.0e-108 394.8 466 47.0
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 2.6e-107 393.3 456 48.7
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 5.9e-107 392.1 471 47.3
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 7.7e-107 391.7 479 44.9
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 1.3e-106 391.0 466 46.6
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 8.5e-106 388.3 465 46.0
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 2.5e-105 386.7 474 46.2
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 3.2e-105 386.3 465 45.8
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 5.5e-105 385.6 472 49.2
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 1.6e-104 384.0 473 45.9
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 2.1e-104 383.6 471 43.9
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 2.1e-104 383.6 466 45.1
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 4.6e-104 382.5 456 45.4
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 3.0e-103 379.8 474 46.0
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 2.0e-102 377.1 452 46.0
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 3.3e-102 376.3 462 44.6
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 4.3e-102 375.9 489 44.6
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 4.8e-101 372.5 473 44.4
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 2.0e-99 367.1 468 44.0
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 2.0e-99 367.1 491 43.6
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 2.6e-99 366.7 423 49.4
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 1.0e-98 364.8 484 44.6
FAN07G0775 Fragaria x ananassa HOM05D006564 ORTHO05D007772 5.0e-98 362.5 480 45.2
Thecc.02G252200 Theobroma cacao HOM05D006564 ORTHO05D007772 1.1e-97 361.3 331 54.7
BcaB04g20267 Brassica carinata HOM05D006564 ORTHO05D007772 3.2e-97 359.8 505 43.0
CiPaw.05G152600 Carya illinoinensis HOM05D006564 ORTHO05D007772 9.4e-97 358.2 370 52.4
Actinidia01701 Actinidia chinensis HOM05D006564 ORTHO05D007772 4.7e-96 355.9 333 55.9
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 3.0e-95 353.2 471 45.6
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 1.7e-93 347.4 486 43.8
Cc11_g15240 Coffea canephora HOM05D006564 ORTHO05D007772 8.2e-93 345.1 403 47.4
RcHm_v2.0_Chr4g0443691 Rosa chinensis HOM05D006564 ORTHO05D007772 8.2e-93 345.1 332 54.2
Oeu056406.1 Olea europaea HOM05D006564 ORTHO05D007772 9.1e-92 341.7 357 51.3
FAN17G1546 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.1e-89 334.7 335 51.6
Cfa009164 Carpinus fangiana HOM05D006564 ORTHO05D007772 5.5e-89 332.4 356 53.4
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 1.8e-87 327.4 473 42.9
Manes.13G029100 Manihot esculenta HOM05D006564 ORTHO05D007772 2.3e-87 327.0 366 51.1
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 1.1e-86 324.7 477 41.3
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 5.7e-86 322.4 482 42.3
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 5.7e-86 322.4 480 41.0
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 7.5e-86 322.0 480 42.7
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 2.4e-84 317.0 541 38.1
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 2.7e-83 313.5 428 43.9
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 2.1e-80 303.9 442 43.2
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 2.1e-80 303.9 478 41.8
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 4.7e-80 302.8 487 40.7
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 1.8e-79 300.8 454 42.1
Sabra10G0025500 Salix brachista HOM05D006564 ORTHO05D007772 9.8e-78 295.0 459 42.9
Lsat_1_v5_gn_4_5380 Lactuca sativa HOM05D006564 ORTHO05D007772 1.6e-72 277.7 360 42.8
Hund06003 Selenicereus undatus HOM05D006564 ORTHO05D007772 2.1e-72 277.3 329 49.5
Lalb_Chr05g0216821 Lupinus albus HOM05D006564 ORTHO05D007772 3.0e-71 273.5 345 45.8
Sc04g0009220 Simmondsia chinensis HOM05D006564 ORTHO05D007772 1.5e-65 254.6 375 42.4
Ca_03150_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 1.9e-52 211.1 201 58.7
Migut.E00617 Erythranthe guttata HOM05D006564 ORTHO05D007772 3.5e-51 206.8 239 47.3
Glyma.02G035501 Glycine max HOM05D006564 ORTHO05D007772 2.3e-47 194.1 207 50.2
Nitab4.5_0003128g0060 Nicotiana tabacum HOM05D006564 ORTHO05D007772 2.3e-47 194.1 321 38.6
Sopen06g024060 Solanum pennellii HOM05D006564 ORTHO05D007772 4.9e-45 186.4 255 40.8
Lj3A1053G47 Lonicera japonica HOM05D006564 ORTHO05D007772 8.3e-45 185.7 194 51.0
PGSC0003DMG401026086 Solanum tuberosum HOM05D006564 ORTHO05D007772 5.6e-41 172.9 301 37.5
Lj3A1053T43 Lonicera japonica HOM05D006564 ORTHO05D007772 2.8e-40 170.6 131 67.9
unitig_744.g23977 Utricularia gibba HOM05D006564 ORTHO05D007772 1.2e-38 165.2 435 32.9
Zm00001eb227420 Zea mays HOM05D006564 ORTHO05D007772 3.2e-36 157.1 257 39.3
ATR1091G047 Amborella trichopoda HOM05D006564 ORTHO05D007772 1.2e-35 155.2 192 46.4
Cpa.g.sc69.59 Carica papaya HOM05D006564 ORTHO05D007772 6.0e-35 152.9 138 55.8
RcHm_v2.0_Chr4g0443681 Rosa chinensis HOM05D006564 ORTHO05D007772 4.3e-33 146.7 127 60.6
HanXRQChr12g0383581 Helianthus annuus HOM05D006564 ORTHO05D007772 1.2e-32 145.2 179 41.9
Lalb_Chr05g0216811 Lupinus albus HOM05D006564 ORTHO05D007772 2.8e-32 144.1 113 64.6
Hund06002 Selenicereus undatus HOM05D006564 ORTHO05D007772 4.7e-32 143.3 142 53.5
FAN22G1362 Fragaria x ananassa HOM05D006564 ORTHO05D007772 9.9e-30 135.6 127 59.1
TAR374G1125 Trochodendron aralioides HOM05D006564 ORTHO05D007772 1.3e-29 135.2 115 63.5
ClCG08G018020 Citrullus lanatus HOM05D006564 ORTHO05D007772 1.7e-26 124.8 126 50.0
HPP92_021828 Vanilla planifolia HOM05D006564 ORTHO05D007772 1.7e-26 124.8 403 26.3
FAN12G0482 Fragaria x ananassa HOM05D006564 ORTHO05D007772 8.7e-26 122.5 127 55.1
Actinidia01700 Actinidia chinensis HOM05D006564 ORTHO05D007772 5.6e-25 119.8 130 51.5
Eucgr.H02586 Eucalyptus grandis HOM05D006564 ORTHO05D007772 4.8e-24 116.7 112 54.5
SHI17545 Sapria himalayana HOM05D006564 ORTHO05D007772 1.8e-18 98.2 119 44.5
CDE07G0681 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 6.7e-18 96.3 262 28.2
CDE06G0043 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 2.4e-15 87.8 89 53.9
HanXRQChr12g0383591 Helianthus annuus HOM05D006564 ORTHO05D007772 1.3e-13 82.0 64 60.9
Gohir.1Z049603 Gossypium hirsutum HOM05D006564 ORTHO05D007772 6.4e-13 79.7 63 68.3
AagrBONN_evm.TU.Sc2ySwM_362.2494 Anthoceros agrestis HOM05D006564 ORTHO05D007772 3.2e-12 77.4 440 21.1
SHI17558 Sapria himalayana HOM05D006564 ORTHO05D007772 3.2e-12 77.4 66 57.6
Gohir.D06G182100 Gossypium hirsutum HOM05D006564 ORTHO05D007772 5.5e-12 76.6 95 46.3
SEGI_36736 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 1.8e-10 71.6 93 38.7
Ca_03152_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 2.3e-10 71.2 70 47.1
Mapoly0088s0064 Marchantia polymorpha HOM05D006564 ORTHO05D007772 5.1e-10 70.1 391 22.5
SHI17547 Sapria himalayana HOM05D006564 ORTHO05D007772 2.5e-09 67.8 63 52.4
Os06g0708200 Oryza sativa ssp. japonica HOM05D006564 ORTHO05D007772 3.3e-09 67.4 107 39.3
Migut.E00618 Erythranthe guttata HOM05D006564 ORTHO05D007772 5.6e-09 66.6 71 47.9
FvH4_4g34180 Fragaria vesca HOM05D006564 ORTHO05D007772 5.6e-09 66.6 127 37.8
Pp3c7_26620 Physcomitrium patens HOM05D006564 ORTHO05D007772 9.6e-09 65.9 213 23.9
CBR_g8804 Chara braunii HOM05D006564 ORTHO05D007772 3.7e-08 63.9 230 25.7
SEGI_21655 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 4.8e-08 63.5 165 28.5


User provided reference genes

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