Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013013001 Vitis vinifera HOM05D001082 ORTHO05D005120 3.5e-100 368.2 179 100.0
GSVIVG01015912001 Vitis vinifera HOM05D001082 ORTHO05D005120 2.1e-44 183.0 111 80.2
Dinv24538 Davidia involucrata HOM05D001082 ORTHO05D005120 9.1e-32 141.0 115 60.9
vmacro01638 Vaccinium macrocarpon HOM05D001082 ORTHO05D005120 5.5e-29 131.7 125 57.6
CSS0006928 Camellia sinensis var. sinensis HOM05D001082 ORTHO05D005120 3.6e-28 129.0 115 58.3
Gohir.D11G284200 Gossypium hirsutum HOM05D001082 ORTHO05D005120 1.0e-27 127.5 104 58.7
TAR629G2955 Trochodendron aralioides HOM05D001082 ORTHO05D005120 3.9e-27 125.6 105 58.1
Sabra01G0055900 Salix brachista HOM05D001082 ORTHO05D005120 5.2e-27 125.2 101 57.4
Gorai.007G307100 Gossypium raimondii HOM05D001082 ORTHO05D005120 6.7e-27 124.8 104 57.7
COL.COLO4_31206 Corchorus olitorius HOM05D001082 ORTHO05D005120 1.1e-26 124.0 104 58.7
Actinidia11712 Actinidia chinensis HOM05D001082 ORTHO05D005120 2.6e-26 122.9 106 56.6
Gohir.A11G274000 Gossypium hirsutum HOM05D001082 ORTHO05D005120 2.6e-26 122.9 104 56.7
QL10p065261 Quercus lobata HOM05D001082 ORTHO05D005120 3.3e-26 122.5 116 57.8
Rhsim11G0112000 Rhododendron simsii HOM05D001082 ORTHO05D005120 5.7e-26 121.7 115 55.7
Atru.chr12.2422 Acer truncatum HOM05D001082 ORTHO05D005120 7.4e-26 121.3 106 59.4
MD10G1009800 Malus domestica HOM05D001082 ORTHO05D005120 9.7e-26 120.9 104 59.6
Potri.001G078600 Populus trichocarpa HOM05D001082 ORTHO05D005120 9.7e-26 120.9 101 58.4
Duzib235G1067 Durio zibethinus HOM05D001082 ORTHO05D005120 1.3e-25 120.6 110 57.3
Cfa008545 Carpinus fangiana HOM05D001082 ORTHO05D005120 1.7e-25 120.2 106 57.5
CiPaw.02G126600 Carya illinoinensis HOM05D001082 ORTHO05D005120 2.2e-25 119.8 106 56.6
Ciclev10000026m.g Citrus clementina HOM05D001082 ORTHO05D005120 2.8e-25 119.4 102 56.9
Manes.15G096100 Manihot esculenta HOM05D001082 ORTHO05D005120 2.8e-25 119.4 115 53.9
Haze_11087 Corylus avellana HOM05D001082 ORTHO05D005120 3.7e-25 119.0 106 56.6
PSO063G6006 Papaver somniferum HOM05D001082 ORTHO05D005120 1.1e-24 117.5 106 52.8
Thecc.06G064200 Theobroma cacao HOM05D001082 ORTHO05D005120 1.4e-24 117.1 104 56.7
Atru.chr6.17 Acer truncatum HOM05D001082 ORTHO05D005120 2.4e-24 116.3 106 57.5
Prupe.5G022000 Prunus persica HOM05D001082 ORTHO05D005120 5.3e-24 115.2 104 55.8
TWI14G0841 Tripterygium wilfordii HOM05D001082 ORTHO05D005120 9.1e-24 114.4 106 53.8
MELO3C020407.2 Cucumis melo HOM05D001082 ORTHO05D005120 1.6e-23 113.6 106 54.7
PSO782G2901 Papaver somniferum HOM05D001082 ORTHO05D005120 1.6e-23 113.6 106 51.9
MD05G1161100 Malus domestica HOM05D001082 ORTHO05D005120 2.0e-23 113.2 115 53.9
Sed0025950 Sechium edule HOM05D001082 ORTHO05D005120 2.0e-23 113.2 106 55.7
CANSAT78G0369 Cannabis sativa HOM05D001082 ORTHO05D005120 7.7e-23 111.3 115 53.9
CsaV3_2G011850 Cucumis sativus L. HOM05D001082 ORTHO05D005120 1.0e-22 110.9 107 55.1
Peaxi162Scf00194g00732 Petunia axillaris HOM05D001082 ORTHO05D005120 1.3e-22 110.5 114 51.8
Eucgr.G00034 Eucalyptus grandis HOM05D001082 ORTHO05D005120 1.7e-22 110.2 105 52.4
Lj5C310G5 Lonicera japonica HOM05D001082 ORTHO05D005120 2.2e-22 109.8 111 55.0
Nitab4.5_0000399g0040 Nicotiana tabacum HOM05D001082 ORTHO05D005120 3.8e-22 109.0 114 50.9
Sc07g0003370 Simmondsia chinensis HOM05D001082 ORTHO05D005120 6.5e-22 108.2 111 49.5
Aqoxy5G03217 Aquilegia oxysepala HOM05D001082 ORTHO05D005120 1.5e-21 107.1 119 47.9
RcHm_v2.0_Chr2g0126921 Rosa chinensis HOM05D001082 ORTHO05D005120 1.5e-21 107.1 106 53.8
Solyc01g102540.3 Solanum lycopersicum HOM05D001082 ORTHO05D005120 3.2e-21 105.9 112 52.7
Sopen01g044980 Solanum pennellii HOM05D001082 ORTHO05D005120 5.5e-21 105.1 112 52.7
PGR042G2652 Punica granatum HOM05D001082 ORTHO05D005120 9.4e-21 104.4 106 50.0
FAN05G0906 Fragaria x ananassa HOM05D001082 ORTHO05D005120 2.1e-20 103.2 106 51.9
FAN09G1182 Fragaria x ananassa HOM05D001082 ORTHO05D005120 2.7e-20 102.8 106 51.9
CAN.G1379.30 Capsicum annuum HOM05D001082 ORTHO05D005120 1.0e-19 100.9 110 50.9
DCAR_003267 Daucus carota HOM05D001082 ORTHO05D005120 4.0e-19 99.0 105 48.6
Glyma.10G055100 Glycine max HOM05D001082 ORTHO05D005120 4.0e-19 99.0 101 50.5
VMungo0720G0635 Vigna mungo HOM05D001082 ORTHO05D000001 5.2e-19 98.6 102 48.0
MSTRG.5181 Avicennia marina HOM05D001082 ORTHO05D005120 6.8e-19 98.2 115 47.0
Migut.N00999 Erythranthe guttata HOM05D001082 ORTHO05D005120 8.8e-19 97.8 125 45.6
FvH4_6g26400 Fragaria vesca HOM05D001082 ORTHO05D005120 1.2e-18 97.4 106 50.0
Nitab4.5_0004090g0140 Nicotiana tabacum HOM05D001082 ORTHO05D005120 1.5e-18 97.1 95 52.6
Glyma.13G142200 Glycine max HOM05D001082 ORTHO05D005120 2.0e-18 96.7 102 49.0
Ah.03g136660 Amaranthus hybridus HOM05D001082 ORTHO05D005120 4.4e-18 95.5 111 45.0
Oeu010602.3 Olea europaea HOM05D001082 ORTHO05D005120 4.4e-18 95.5 95 49.5
Lalb_Chr21g0315021 Lupinus albus HOM05D001082 ORTHO05D005120 5.7e-18 95.1 121 43.0
Medtr1g063180 Medicago truncatula HOM05D001082 ORTHO05D005120 5.7e-18 95.1 111 44.1
Lj5g0014962 Lotus japonicus HOM05D001082 ORTHO05D005120 7.5e-18 94.7 102 48.0
Phvul.007G218900 Phaseolus vulgaris HOM05D001082 ORTHO05D005120 9.8e-18 94.4 102 46.1
Psat6g073960 Pisum sativum HOM05D001082 ORTHO05D005120 9.8e-18 94.4 111 44.1
arahy.Tifrunner.gnm1.ann1.922X53 Arachis hypogaea HOM05D001082 ORTHO05D005120 1.3e-17 94.0 110 48.2
arahy.Tifrunner.gnm1.ann1.Y1BA5Y Arachis hypogaea HOM05D001082 ORTHO05D005120 1.3e-17 94.0 110 48.2
TPR.G11274 Trifolium pratense HOM05D001082 ORTHO05D005120 1.3e-17 94.0 111 44.1
EL10Ac6g13928 Beta vulgaris HOM05D001082 ORTHO05D005120 1.7e-17 93.6 102 50.0
Nn3g20376 Nelumbo nucifera HOM05D001082 ORTHO05D005120 2.2e-17 93.2 115 45.2
AUR62032513 Chenopodium quinoa HOM05D001082 ORTHO05D005120 6.3e-17 91.7 111 44.1
Ca_11506_v3 Cicer arietinum L. HOM05D001082 ORTHO05D005120 6.3e-17 91.7 111 43.2
SalBow1G7939 Salvia bowleyana HOM05D001082 ORTHO05D005120 8.3e-17 91.3 114 44.7
ATR0810G183 Amborella trichopoda HOM05D001082 ORTHO05D005120 3.1e-16 89.4 104 48.1
ECA238G2349 Erigeron canadensis HOM05D001082 ORTHO05D005120 4.1e-16 89.0 110 45.5
RcHm_v2.0_Chr4g0402211 Rosa chinensis HOM05D001082 ORTHO05D005120 4.1e-16 89.0 86 53.5
Zm00001eb232140 Zea mays HOM05D001082 ORTHO05D005120 4.1e-16 89.0 102 48.0
AUR62042820 Chenopodium quinoa HOM05D001082 ORTHO05D005120 5.4e-16 88.6 111 43.2
HanXRQChr14g0452101 Helianthus annuus HOM05D001082 ORTHO05D005120 1.2e-15 87.4 110 46.4
Lj3g0009617 Lotus japonicus HOM05D001082 ORTHO05D005120 2.0e-15 86.7 73 57.5
Lsat_1_v5_gn_7_54700 Lactuca sativa HOM05D001082 ORTHO05D005120 2.7e-15 86.3 97 49.5
Os02g0142500 Oryza sativa ssp. japonica HOM05D001082 ORTHO05D005120 2.7e-15 86.3 88 54.5
THA.LOC104806485 Tarenaya hassleriana HOM05D001082 ORTHO05D005120 6.5e-14 81.6 105 42.9
A05p24320 Brassica napus HOM05D001082 ORTHO05D005120 1.9e-13 80.1 104 44.2
BraA05t21326Z Brassica rapa HOM05D001082 ORTHO05D005120 1.9e-13 80.1 104 44.2
BcaC05g27806 Brassica carinata HOM05D001082 ORTHO05D005120 5.5e-13 78.6 104 43.3
C05p38080 Brassica napus HOM05D001082 ORTHO05D005120 5.5e-13 78.6 104 43.3
BolC5t32536H Brassica oleracea HOM05D001082 ORTHO05D005120 9.4e-13 77.8 102 43.1
ECA233G1970 Erigeron canadensis HOM05D001082 ORTHO05D005120 9.4e-13 77.8 112 44.6
BcaB03g13701 Brassica carinata HOM05D001082 ORTHO05D005120 1.6e-12 77.0 101 42.6
Thhalv10006552m.g Eutrema salsugineum HOM05D001082 ORTHO05D005120 1.6e-12 77.0 104 43.3
Sp1g28860 Schrenkiella parvula HOM05D001082 ORTHO05D005120 2.7e-12 76.3 104 43.3
AL1G47790 Arabidopsis lyrata HOM05D001082 ORTHO05D005120 3.6e-12 75.9 104 43.3
AT1G33410 Arabidopsis thaliana HOM05D001082 ORTHO05D005120 3.6e-12 75.9 101 43.6
ECA233G2822 Erigeron canadensis HOM05D001082 ORTHO05D005120 3.6e-12 75.9 110 39.1
CDE01G0790 Ceratophyllum demersum HOM05D001082 ORTHO05D005120 4.7e-12 75.5 69 52.2
arahy.Tifrunner.gnm1.ann1.CLUS6A Arachis hypogaea HOM05D001082 ORTHO05D005120 8.8e-11 71.2 113 41.6
Aa31LG6G7920 Aethionema arabicum HOM05D001082 ORTHO05D005120 2.0e-10 70.1 102 42.2
Carub.0001s3160 Capsella rubella HOM05D001082 ORTHO05D005120 2.0e-10 70.1 102 40.2
unitig_22.g5791 Utricularia gibba HOM05D001082 ORTHO05D005120 2.6e-10 69.7 68 51.5
CARHR032850 Cardamine hirsuta HOM05D001082 ORTHO05D005120 1.3e-09 67.4 103 40.8
ECA233G1839 Erigeron canadensis HOM05D001082 ORTHO05D005120 1.3e-09 67.4 81 44.4
BolC8t47896H Brassica oleracea HOM05D001082 ORTHO05D039247 1.3e-06 57.4 67 44.8
Pp3c11_26590 Physcomitrium patens HOM05D001082 ORTHO05D005120 2.3e-06 56.6 54 44.4


User provided reference genes

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