Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010478001 Vitis vinifera HOM05D003724 ORTHO05D004367 7.1e-44 180.3 94 100.0
FAN22G0779 Fragaria x ananassa HOM05D003724 ORTHO05D004367 7.9e-35 150.2 85 92.9
CsaV3_2G025450 Cucumis sativus L. HOM05D003724 ORTHO05D004367 1.3e-34 149.4 77 97.4
Aqoxy5G02771 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 2.3e-34 148.7 75 100.0
MELO3C010743.2 Cucumis melo HOM05D003724 ORTHO05D004367 2.3e-34 148.7 75 100.0
FvH4_4g23800 Fragaria vesca HOM05D003724 ORTHO05D004367 2.3e-34 148.7 75 100.0
FAN17G0970 Fragaria x ananassa HOM05D003724 ORTHO05D004367 2.3e-34 148.7 75 100.0
RcHm_v2.0_Chr4g0430341 Rosa chinensis HOM05D003724 ORTHO05D004367 2.3e-34 148.7 75 100.0
Sed0021729 Sechium edule HOM05D003724 ORTHO05D004367 2.3e-34 148.7 75 100.0
Actinidia08073 Actinidia chinensis HOM05D003724 ORTHO05D004367 5.1e-34 147.5 75 98.7
Actinidia30650 Actinidia chinensis HOM05D003724 ORTHO05D004367 5.1e-34 147.5 75 98.7
Aa31sc377G30 Aethionema arabicum HOM05D003724 ORTHO05D004367 5.1e-34 147.5 75 98.7
CARHR059910 Cardamine hirsuta HOM05D003724 ORTHO05D004367 5.1e-34 147.5 75 98.7
Thhalv10018311m.g Eutrema salsugineum HOM05D003724 ORTHO05D004367 5.1e-34 147.5 75 98.7
Lj3C1068T3 Lonicera japonica HOM05D003724 ORTHO05D004367 5.1e-34 147.5 75 98.7
MD13G1118700 Malus domestica HOM05D003724 ORTHO05D004367 5.1e-34 147.5 75 98.7
Prupe.1G226200 Prunus persica HOM05D003724 ORTHO05D004367 5.1e-34 147.5 75 98.7
QL03p052803 Quercus lobata HOM05D003724 ORTHO05D004367 5.1e-34 147.5 75 98.7
Sp5g22320 Schrenkiella parvula HOM05D003724 ORTHO05D004367 5.1e-34 147.5 75 98.7
DCAR_026466 Daucus carota HOM05D003724 ORTHO05D004367 6.7e-34 147.1 79 94.9
RcHm_v2.0_Chr4g0430291 Rosa chinensis HOM05D003724 ORTHO05D004367 6.7e-34 147.1 75 98.7
PSO339G4917 Papaver somniferum HOM05D003724 ORTHO05D004367 8.7e-34 146.7 75 98.7
PSO478G4090 Papaver somniferum HOM05D003724 ORTHO05D004367 8.7e-34 146.7 75 98.7
AL2G25920 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 1.1e-33 146.4 75 97.3
AT1G67370 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 1.1e-33 146.4 75 97.3
arahy.Tifrunner.gnm1.ann1.3XH1N1 Arachis hypogaea HOM05D003724 ORTHO05D004367 1.1e-33 146.4 75 97.3
CANSAT01G0850 Cannabis sativa HOM05D003724 ORTHO05D004367 1.1e-33 146.4 75 97.3
Migut.C00176 Erythranthe guttata HOM05D003724 ORTHO05D004367 1.1e-33 146.4 75 97.3
Glyma.11G250351 Glycine max HOM05D003724 ORTHO05D004367 1.1e-33 146.4 80 93.8
Lalb_Chr01g0009271 Lupinus albus HOM05D003724 ORTHO05D004367 1.1e-33 146.4 75 97.3
Potri.003G173200 Populus trichocarpa HOM05D003724 ORTHO05D004367 1.1e-33 146.4 75 97.3
THA.LOC104825509 Tarenaya hassleriana HOM05D003724 ORTHO05D004367 1.1e-33 146.4 75 97.3
TAR374G1082 Trochodendron aralioides HOM05D003724 ORTHO05D004367 1.1e-33 146.4 76 97.4
VMungo1383G3407 Vigna mungo HOM05D003724 ORTHO05D004367 1.1e-33 146.4 75 97.3
Dinv10959 Davidia involucrata HOM05D003724 ORTHO05D004367 1.5e-33 146.0 75 97.3
Glyma.18G006800 Glycine max HOM05D003724 ORTHO05D004367 1.5e-33 146.0 75 97.3
Medtr3g085380 Medicago truncatula HOM05D003724 ORTHO05D004367 1.5e-33 146.0 75 97.3
Psat5g096280 Pisum sativum HOM05D003724 ORTHO05D004367 1.5e-33 146.0 75 97.3
TPR.G28283 Trifolium pratense HOM05D003724 ORTHO05D004367 1.5e-33 146.0 75 97.3
CAN.G804.4 Capsicum annuum HOM05D003724 ORTHO05D004367 1.9e-33 145.6 75 97.3
Lalb_Chr03g0034531 Lupinus albus HOM05D003724 ORTHO05D004367 1.9e-33 145.6 76 94.7
MD16G1118900 Malus domestica HOM05D003724 ORTHO05D004367 1.9e-33 145.6 75 96.0
PGR102G1478 Punica granatum HOM05D003724 ORTHO05D004367 1.9e-33 145.6 75 97.3
RcHm_v2.0_Chr4g0430331 Rosa chinensis HOM05D003724 ORTHO05D004367 1.9e-33 145.6 74 100.0
Solyc04g007330.3 Solanum lycopersicum HOM05D003724 ORTHO05D004367 1.9e-33 145.6 75 97.3
Sopen04g002390 Solanum pennellii HOM05D003724 ORTHO05D004367 1.9e-33 145.6 75 97.3
Atru.chr11.2319 Acer truncatum HOM05D003724 ORTHO05D004367 2.5e-33 145.2 75 96.0
Aqoxy7G01914 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 2.5e-33 145.2 75 97.3
Migut.K00732 Erythranthe guttata HOM05D003724 ORTHO05D004367 2.5e-33 145.2 75 96.0
HanXRQChr08g0207781 Helianthus annuus HOM05D003724 ORTHO05D004367 2.5e-33 145.2 75 97.3
PSO384G3745 Papaver somniferum HOM05D003724 ORTHO05D004367 2.5e-33 145.2 75 97.3
TAR622G1117 Trochodendron aralioides HOM05D003724 ORTHO05D004367 2.5e-33 145.2 75 97.3
Manes.12G011600 Manihot esculenta HOM05D003724 ORTHO05D004367 3.3e-33 144.8 75 96.0
Gohir.A03G126400 Gossypium hirsutum HOM05D003724 ORTHO05D004367 4.3e-33 144.4 75 96.0
Gorai.005G167400 Gossypium raimondii HOM05D003724 ORTHO05D004367 4.3e-33 144.4 75 96.0
Lj1g0003468 Lotus japonicus HOM05D003724 ORTHO05D004367 4.3e-33 144.4 75 97.3
PSO782G1352 Papaver somniferum HOM05D003724 ORTHO05D004367 4.3e-33 144.4 75 96.0
TWI75G0323 Tripterygium wilfordii HOM05D003724 ORTHO05D004367 4.3e-33 144.4 75 96.0
HPP92_003196 Vanilla planifolia HOM05D003724 ORTHO05D004367 4.3e-33 144.4 75 96.0
Oeu060814.1 Olea europaea HOM05D003724 ORTHO05D004367 5.6e-33 144.1 75 94.7
SalBow2G1610 Salvia bowleyana HOM05D003724 ORTHO05D004367 5.6e-33 144.1 75 94.7
Sopen05g010640 Solanum pennellii HOM05D003724 ORTHO05D004367 5.6e-33 144.1 75 96.0
Lsat_1_v5_gn_8_147680 Lactuca sativa HOM05D003724 ORTHO05D004367 7.4e-33 143.7 76 93.4
Thecc.02G209200 Theobroma cacao HOM05D003724 ORTHO05D004367 7.4e-33 143.7 75 96.0
ATR0561G244 Amborella trichopoda HOM05D003724 ORTHO05D004367 9.6e-33 143.3 84 89.3
CiPaw.05G110100 Carya illinoinensis HOM05D003724 ORTHO05D004367 9.6e-33 143.3 75 96.0
Lj1g0008936 Lotus japonicus HOM05D003724 ORTHO05D004367 9.6e-33 143.3 75 96.0
Nn3g16465 Nelumbo nucifera HOM05D003724 ORTHO05D004367 9.6e-33 143.3 75 96.0
AUR62008480 Chenopodium quinoa HOM05D003724 ORTHO05D004367 1.3e-32 142.9 75 94.7
Os09g0506800 Oryza sativa ssp. japonica HOM05D003724 ORTHO05D004367 1.3e-32 142.9 75 94.7
PSO478G5007 Papaver somniferum HOM05D003724 ORTHO05D004367 1.3e-32 142.9 75 96.0
CDE05G2922 Ceratophyllum demersum HOM05D003724 ORTHO05D004367 2.1e-32 142.1 73 95.9
PSO782G3500 Papaver somniferum HOM05D003724 ORTHO05D004367 2.1e-32 142.1 75 96.0
Oeu036873.1 Olea europaea HOM05D003724 ORTHO05D004367 2.8e-32 141.7 75 93.3
BolC6t39148H Brassica oleracea HOM05D003724 ORTHO05D004367 4.8e-32 141.0 76 92.1
Cpa.g.sc43.54 Carica papaya HOM05D003724 ORTHO05D004367 4.8e-32 141.0 74 94.6
ECA233G0767 Erigeron canadensis HOM05D003724 ORTHO05D004367 8.1e-32 140.2 75 92.0
Nitab4.5_0003981g0060 Nicotiana tabacum HOM05D003724 ORTHO05D004367 8.1e-32 140.2 75 90.7
A07p33960 Brassica napus HOM05D003724 ORTHO05D004367 1.1e-31 139.8 75 92.0
C06p42900 Brassica napus HOM05D003724 ORTHO05D004367 1.1e-31 139.8 76 90.8
BcaB03g15202 Brassica carinata HOM05D003724 ORTHO05D004367 3.1e-31 138.3 74 91.9
BcaC08g46167 Brassica carinata HOM05D003724 ORTHO05D004367 3.1e-31 138.3 74 91.9
BraA07t31023Z Brassica rapa HOM05D003724 ORTHO05D004367 5.3e-31 137.5 76 89.5
Zm00001eb102420 Zea mays HOM05D003724 ORTHO05D004367 5.3e-31 137.5 74 93.2
C06p38720 Brassica napus HOM05D003724 ORTHO05D004367 1.2e-30 136.3 74 90.5
Hund06087 Selenicereus undatus HOM05D003724 ORTHO05D004367 1.5e-30 136.0 81 87.7
Potri.001G055201 Populus trichocarpa HOM05D003724 ORTHO05D004367 9.3e-28 126.7 81 84.0
Ah.01g020690 Amaranthus hybridus HOM05D003724 ORTHO05D004367 6.0e-27 124.0 81 81.5
PSO339G0549 Papaver somniferum HOM05D003724 ORTHO05D004367 2.5e-25 118.6 75 80.0
Peaxi162Scf00128g01233 Petunia axillaris HOM05D003724 ORTHO05D004367 3.3e-25 118.2 65 87.7
SGA_v2.0_scaffold9G04687 Striga asiatica HOM05D003724 ORTHO05D004367 5.6e-25 117.5 136 52.9
MBI06_g32743_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 1.6e-24 115.9 56 100.0
Rhsim12G0026000 Rhododendron simsii HOM05D003724 ORTHO05D004367 2.1e-24 115.5 58 96.6
CBR_g17956 Chara braunii HOM05D003724 ORTHO05D004367 2.8e-24 115.2 73 79.5
CSS0039632 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 8.2e-24 113.6 56 98.2
vmacro01062 Vaccinium macrocarpon HOM05D003724 ORTHO05D004367 1.8e-23 112.5 58 93.1
CARHR058050 Cardamine hirsuta HOM05D003724 ORTHO05D004367 5.3e-23 110.9 70 82.9
AagrBONN_evm.TU.Sc2ySwM_368.2626 Anthoceros agrestis HOM05D003724 ORTHO05D004367 6.9e-23 110.5 74 74.3
Nitab4.5_0002441g0080 Nicotiana tabacum HOM05D003724 ORTHO05D004367 1.2e-22 109.8 56 91.1
Solyc05g015360.2 Solanum lycopersicum HOM05D003724 ORTHO05D004367 1.5e-22 109.4 75 74.7
Mapoly0003s0194 Marchantia polymorpha HOM05D003724 ORTHO05D004367 1.3e-21 106.3 76 69.7
AT4G32200 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 8.4e-21 103.6 63 79.4
arahy.Tifrunner.gnm1.ann1.QLFJ9Y Arachis hypogaea HOM05D003724 ORTHO05D004367 2.1e-19 99.0 51 98.0
Ca_16461_v3 Cicer arietinum L. HOM05D003724 ORTHO05D004367 2.1e-19 99.0 51 98.0
Haze_12416 Corylus avellana HOM05D003724 ORTHO05D004367 3.5e-19 98.2 51 96.1
Sabra01G0039800 Salix brachista HOM05D003724 ORTHO05D004367 4.6e-19 97.8 51 96.1
Sabra03G0126700 Salix brachista HOM05D003724 ORTHO05D004367 4.6e-19 97.8 51 96.1
AUR62021613 Chenopodium quinoa HOM05D003724 ORTHO05D004367 6.0e-19 97.4 51 96.1
Gohir.D02G149500 Gossypium hirsutum HOM05D003724 ORTHO05D004367 7.9e-19 97.1 51 96.1
CSS0007637 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 1.8e-18 95.9 51 94.1
EL10Ac6g13492 Beta vulgaris HOM05D003724 ORTHO05D004367 3.9e-18 94.7 51 92.2
Ciclev10033677m.g Citrus clementina HOM05D003724 ORTHO05D004367 3.9e-18 94.7 62 80.6
COL.COLO4_20397 Corchorus olitorius HOM05D003724 ORTHO05D004367 5.1e-18 94.4 51 94.1
SMO116G0148 Selaginella moellendorffii HOM05D003724 ORTHO05D004367 3.7e-16 88.2 60 70.0
SHI17966 Sapria himalayana HOM05D003724 ORTHO05D004367 8.2e-16 87.0 71 70.4
PSO339G0625 Papaver somniferum HOM05D003724 ORTHO05D004367 1.4e-15 86.3 68 60.3
Nitab4.5_0003884g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 3.4e-14 81.6 43 86.0
AL1G56910 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 1.6e-11 72.8 77 63.6
FAN12G2603 Fragaria x ananassa HOM05D003724 ORTHO05D004367 6.1e-11 70.9 76 57.9
Cre10.g452550 Chlamydomonas reinhardtii HOM05D003724 ORTHO05D004367 1.4e-10 69.7 74 50.0
Os01g0165800 Oryza sativa ssp. japonica HOM05D020709 ORTHO05D004367 5.1e-10 67.8 70 47.1
ClCG08G017130 Citrullus lanatus HOM05D003724 ORTHO05D004367 6.7e-10 67.4 32 100.0
MBI06_g46773_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 6.7e-10 67.4 32 100.0
Pp3c5_4780 Physcomitrium patens HOM05D003724 ORTHO05D004367 8.8e-10 67.0 42 73.8
QL06p013707 Quercus lobata HOM05D003724 ORTHO05D000062 2.5e-09 65.5 86 48.8
Hma1.2p1_0053F.1_g030850 Hydrangea macrophylla HOM05D003724 ORTHO05D004367 2.8e-08 62.0 32 93.8
Hma1.2p1_0200F.1_g085970 Hydrangea macrophylla HOM05D003724 ORTHO05D004367 2.8e-08 62.0 32 90.6
QL10p034497 Quercus lobata HOM05D003724 ORTHO05D004367 2.8e-08 62.0 39 87.2
Os12g0606600 Oryza sativa ssp. japonica HOM05D003724 ORTHO05D004367 3.1e-07 58.5 71 45.1
Lj3g0010411 Lotus japonicus HOM05D003724 ORTHO05D004367 9.1e-07 57.0 51 60.8


User provided reference genes

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