Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010110001 Vitis vinifera HOM05D003620 ORTHO05D004261 3.7e-45 184.5 92 100.0
Lj6g0009012 Lotus japonicus HOM05D003620 ORTHO05D004261 1.6e-11 72.8 38 89.5
GSVIVG01029732001 Vitis vinifera HOM05D003620 ORTHO05D004261 1.2e-08 63.2 32 93.8
CiPaw.05G039200 Carya illinoinensis HOM05D003620 ORTHO05D004261 2.8e-08 62.0 32 90.6
TAR625G1066 Trochodendron aralioides HOM05D003620 ORTHO05D004261 2.8e-08 62.0 32 90.6
Cfa005564 Carpinus fangiana HOM05D003620 ORTHO05D004261 3.6e-08 61.6 32 87.5
Dinv24230 Davidia involucrata HOM05D003620 ORTHO05D004261 3.6e-08 61.6 32 87.5
Migut.B00643 Erythranthe guttata HOM05D003620 ORTHO05D004261 3.6e-08 61.6 36 80.6
Lalb_Chr18g0060681 Lupinus albus HOM05D003620 ORTHO05D004261 3.6e-08 61.6 32 87.5
Nn1g06259 Nelumbo nucifera HOM05D003620 ORTHO05D004261 3.6e-08 61.6 32 87.5
QL02p098754 Quercus lobata HOM05D003620 ORTHO05D004261 3.6e-08 61.6 32 87.5
CSS0027167 Camellia sinensis var. sinensis HOM05D003620 ORTHO05D004261 4.7e-08 61.2 32 90.6
Lsat_1_v5_gn_7_80501 Lactuca sativa HOM05D003620 ORTHO05D004261 4.7e-08 61.2 32 87.5
Os01g0959800 Oryza sativa ssp. japonica HOM05D003620 ORTHO05D004261 4.7e-08 61.2 32 87.5
CSS0011415 Camellia sinensis var. sinensis HOM05D003620 ORTHO05D004261 6.1e-08 60.8 32 90.6
CANSAT11G1106 Cannabis sativa HOM05D003620 ORTHO05D004261 6.1e-08 60.8 32 87.5
Glyma.08G181200 Glycine max HOM05D003620 ORTHO05D004261 6.1e-08 60.8 32 90.6
Lj5C243T9 Lonicera japonica HOM05D003620 ORTHO05D004261 6.1e-08 60.8 36 80.6
Aqoxy6G00354 Aquilegia oxysepala HOM05D003620 ORTHO05D004261 8.0e-08 60.5 32 84.4
Ca_00113_v3 Cicer arietinum L. HOM05D003620 ORTHO05D004261 8.0e-08 60.5 32 87.5
Haze_10770 Corylus avellana HOM05D003620 ORTHO05D004261 8.0e-08 60.5 35 77.1
HanXRQChr11g0337651 Helianthus annuus HOM05D003620 ORTHO05D004261 8.0e-08 60.5 32 87.5
Lj6g0005534 Lotus japonicus HOM05D003620 ORTHO05D004261 8.0e-08 60.5 32 87.5
TPR.G19731 Trifolium pratense HOM05D003620 ORTHO05D004261 8.0e-08 60.5 32 87.5
VMungo0540G0770 Vigna mungo HOM05D003620 ORTHO05D004261 8.0e-08 60.5 32 87.5
CANSAT11G0919 Cannabis sativa HOM05D003620 ORTHO05D004261 1.0e-07 60.1 32 84.4
COL.COLO4_20874 Corchorus olitorius HOM05D003620 ORTHO05D004261 1.0e-07 60.1 32 84.4
ECA236G2397 Erigeron canadensis HOM05D003620 ORTHO05D004261 1.0e-07 60.1 32 84.4
ECA240G1941 Erigeron canadensis HOM05D003620 ORTHO05D004261 1.0e-07 60.1 32 84.4
FvH4_5g30530 Fragaria vesca HOM05D003620 ORTHO05D004261 1.0e-07 60.1 32 84.4
FAN08G3618 Fragaria x ananassa HOM05D003620 ORTHO05D004261 1.0e-07 60.1 32 84.4
FAN18G1779 Fragaria x ananassa HOM05D003620 ORTHO05D004261 1.0e-07 60.1 32 84.4
HanXRQChr03g0065791 Helianthus annuus HOM05D003620 ORTHO05D004261 1.0e-07 60.1 32 84.4
Lsat_1_v5_gn_9_117920 Lactuca sativa HOM05D003620 ORTHO05D004261 1.0e-07 60.1 32 84.4
MD08G1222700 Malus domestica HOM05D003620 ORTHO05D004261 1.0e-07 60.1 32 84.4
Manes.10G117200 Manihot esculenta HOM05D003620 ORTHO05D004261 1.0e-07 60.1 32 84.4
PGR042G1212 Punica granatum HOM05D003620 ORTHO05D004261 1.0e-07 60.1 32 84.4
RcHm_v2.0_Chr7g0225351 Rosa chinensis HOM05D003620 ORTHO05D004261 1.0e-07 60.1 32 84.4
Thecc.02G144000 Theobroma cacao HOM05D003620 ORTHO05D004261 1.0e-07 60.1 32 84.4
HPP92_019398 Vanilla planifolia HOM05D003620 ORTHO05D004261 1.0e-07 60.1 32 87.5
Cc02_g21940 Coffea canephora HOM05D003620 ORTHO05D004261 1.4e-07 59.7 32 84.4
DCAR_001444 Daucus carota HOM05D003620 ORTHO05D004261 1.4e-07 59.7 32 84.4
Duzib132G0147 Durio zibethinus HOM05D003620 ORTHO05D004261 1.4e-07 59.7 32 84.4
FAN04G1518 Fragaria x ananassa HOM05D003620 ORTHO05D004261 1.4e-07 59.7 32 81.2
FAN13G1243 Fragaria x ananassa HOM05D003620 ORTHO05D004261 1.4e-07 59.7 36 77.8
MBI06_g29671_MAGBIO Magnolia biondii HOM05D003620 ORTHO05D004261 1.4e-07 59.7 32 87.5
PSO541G1613 Papaver somniferum HOM05D003620 ORTHO05D004261 1.4e-07 59.7 32 84.4
MELO3C018674.2 Cucumis melo HOM05D003620 ORTHO05D004261 1.8e-07 59.3 32 84.4
CsaV3_7G006180 Cucumis sativus L. HOM05D003620 ORTHO05D004261 1.8e-07 59.3 32 84.4
Oeu047368.1 Olea europaea HOM05D003620 ORTHO05D004261 1.8e-07 59.3 32 81.2
Phvul.006G208800 Phaseolus vulgaris HOM05D003620 ORTHO05D004261 1.8e-07 59.3 32 84.4
Prupe.1G560600 Prunus persica HOM05D003620 ORTHO05D004261 1.8e-07 59.3 32 84.4
SEGI_27738 Sequoiadendron giganteum HOM05D003620 ORTHO05D004261 1.8e-07 59.3 38 73.7
vmacro01806 Vaccinium macrocarpon HOM05D003620 ORTHO05D004261 1.8e-07 59.3 32 84.4
Gohir.A12G013800 Gossypium hirsutum HOM05D003620 ORTHO05D004261 2.3e-07 58.9 32 81.2
Gorai.008G014600 Gossypium raimondii HOM05D003620 ORTHO05D004261 2.3e-07 58.9 32 81.2
Psat1g218440 Pisum sativum HOM05D003620 ORTHO05D004261 2.3e-07 58.9 32 84.4
Atru.chr6.881 Acer truncatum HOM05D003620 ORTHO05D004261 3.0e-07 58.5 32 81.2
ATR1136G049 Amborella trichopoda HOM05D003620 ORTHO05D004261 3.0e-07 58.5 32 81.2
BcaC04g19991 Brassica carinata HOM05D003620 ORTHO05D004261 3.0e-07 58.5 32 81.2
A10p14580 Brassica napus HOM05D003620 ORTHO05D004261 3.0e-07 58.5 32 81.2
C09p49020 Brassica napus HOM05D003620 ORTHO05D004261 3.0e-07 58.5 32 81.2
BolC9t57753H Brassica oleracea HOM05D003620 ORTHO05D004261 3.0e-07 58.5 32 81.2
BraA10t43545Z Brassica rapa HOM05D003620 ORTHO05D004261 3.0e-07 58.5 32 81.2
CAN.G523.97 Capsicum annuum HOM05D003620 ORTHO05D004261 3.0e-07 58.5 32 84.4
CDE08G1148 Ceratophyllum demersum HOM05D003620 ORTHO05D004261 3.0e-07 58.5 32 84.4
Manes.07G024800 Manihot esculenta HOM05D003620 ORTHO05D004261 3.0e-07 58.5 32 81.2
Peaxi162Scf00152g01227 Petunia axillaris HOM05D003620 ORTHO05D004261 3.0e-07 58.5 32 84.4
SalBow5G2235 Salvia bowleyana HOM05D003620 ORTHO05D004261 3.0e-07 58.5 32 84.4
SalBow5G2754 Salvia bowleyana HOM05D003620 ORTHO05D004261 3.0e-07 58.5 32 84.4
Solyc01g104880.3 Solanum lycopersicum HOM05D003620 ORTHO05D004261 3.0e-07 58.5 32 84.4
Sopen01g047400 Solanum pennellii HOM05D003620 ORTHO05D004261 3.0e-07 58.5 32 84.4
Actinidia00242 Actinidia chinensis HOM05D003620 ORTHO05D004261 4.0e-07 58.2 32 81.2
Actinidia38967 Actinidia chinensis HOM05D003620 ORTHO05D004261 4.0e-07 58.2 32 81.2
MSTRG.16561 Avicennia marina HOM05D003620 ORTHO05D004261 4.0e-07 58.2 32 84.4
Medtr2g008190 Medicago truncatula HOM05D003620 ORTHO05D004261 4.0e-07 58.2 32 84.4
Oeu037206.2 Olea europaea HOM05D003620 ORTHO05D004261 4.0e-07 58.2 32 81.2
Gohir.D12G014500 Gossypium hirsutum HOM05D003620 ORTHO05D004261 5.2e-07 57.8 32 81.2
Nitab4.5_0007987g0020 Nicotiana tabacum HOM05D003620 ORTHO05D004261 5.2e-07 57.8 32 84.4
PSO675G2802 Papaver somniferum HOM05D003620 ORTHO05D004261 5.2e-07 57.8 32 81.2
Sed0005951 Sechium edule HOM05D003620 ORTHO05D004261 5.2e-07 57.8 32 81.2
Hund22190 Selenicereus undatus HOM05D003620 ORTHO05D004261 5.2e-07 57.8 36 72.2
Sc09g0004430 Simmondsia chinensis HOM05D003620 ORTHO05D004261 5.2e-07 57.8 32 84.4
Aa31LG3G13090 Aethionema arabicum HOM05D003620 ORTHO05D004261 6.8e-07 57.4 32 78.1
AL161U10010 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 6.8e-07 57.4 32 78.1
AL8G33150 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 6.8e-07 57.4 32 78.1
AT5G57190 Arabidopsis thaliana HOM05D003620 ORTHO05D004261 6.8e-07 57.4 32 78.1
BcaB08g36077 Brassica carinata HOM05D003620 ORTHO05D004261 6.8e-07 57.4 32 78.1
Carub.0008s1770 Capsella rubella HOM05D003620 ORTHO05D004261 6.8e-07 57.4 32 78.1
ClCG09G013430 Citrullus lanatus HOM05D003620 ORTHO05D004261 6.8e-07 57.4 32 78.1
Sp6g18920 Schrenkiella parvula HOM05D003620 ORTHO05D004261 6.8e-07 57.4 32 78.1
TWI14G0354 Tripterygium wilfordii HOM05D003620 ORTHO05D004261 6.8e-07 57.4 32 81.2
THA.LOC104811774 Tarenaya hassleriana HOM05D003620 ORTHO05D004261 8.9e-07 57.0 32 78.1
CARHR270980 Cardamine hirsuta HOM05D003620 ORTHO05D004261 1.2e-06 56.6 32 78.1
Eucgr.G00656 Eucalyptus grandis HOM05D003620 ORTHO05D004261 1.2e-06 56.6 32 81.2
Nitab4.5_0008610g0050 Nicotiana tabacum HOM05D003620 ORTHO05D004261 1.2e-06 56.6 32 81.2
Potri.001G172400 Populus trichocarpa HOM05D003620 ORTHO05D004261 1.2e-06 56.6 32 81.2
Sabra01G0139300 Salix brachista HOM05D003620 ORTHO05D004261 1.2e-06 56.6 32 81.2
Sabra03G0035800 Salix brachista HOM05D003620 ORTHO05D004261 1.2e-06 56.6 32 81.2
THA.LOC104817775 Tarenaya hassleriana HOM05D003620 ORTHO05D004261 1.2e-06 56.6 32 78.1
Aa31LG3G330 Aethionema arabicum HOM05D003620 ORTHO05D004261 1.5e-06 56.2 32 78.1
AL7G27030 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 1.5e-06 56.2 32 78.1
BcaNung03773 Brassica carinata HOM05D003620 ORTHO05D004261 1.5e-06 56.2 32 78.1
CARHR233480 Cardamine hirsuta HOM05D003620 ORTHO05D004261 1.5e-06 56.2 32 78.1
Cpa.g.sc845.5 Carica papaya HOM05D003620 ORTHO05D004261 1.5e-06 56.2 32 75.0
Thhalv10024661m.g Eutrema salsugineum HOM05D003620 ORTHO05D004261 1.5e-06 56.2 32 78.1
AT4G25970 Arabidopsis thaliana HOM05D003620 ORTHO05D004261 2.0e-06 55.8 32 75.0
Carub.0007s1498 Capsella rubella HOM05D003620 ORTHO05D004261 2.0e-06 55.8 32 75.0
Peaxi162Scf00001g00523 Petunia axillaris HOM05D003620 ORTHO05D004261 2.0e-06 55.8 32 81.2
BcaC09g50725 Brassica carinata HOM05D003620 ORTHO05D004261 2.6e-06 55.5 32 78.1
A01p17230 Brassica napus HOM05D003620 ORTHO05D004261 2.6e-06 55.5 32 78.1
C01p21590 Brassica napus HOM05D003620 ORTHO05D004261 2.6e-06 55.5 32 78.1
BolC1t02078H Brassica oleracea HOM05D003620 ORTHO05D004261 2.6e-06 55.5 32 78.1
BraA01t01679Z Brassica rapa HOM05D003620 ORTHO05D004261 2.6e-06 55.5 32 78.1
Thhalv10012950m.g Eutrema salsugineum HOM05D003620 ORTHO05D004261 2.6e-06 55.5 32 78.1
Potri.003G061700 Populus trichocarpa HOM05D003620 ORTHO05D004261 2.6e-06 55.5 32 78.1
MELO3C003259.2 Cucumis melo HOM05D003620 ORTHO05D004261 5.7e-06 54.3 32 75.0
CsaV3_3G020620 Cucumis sativus L. HOM05D003620 ORTHO05D004261 5.7e-06 54.3 30 80.0
arahy.Tifrunner.gnm1.ann1.F2S38R Arachis hypogaea HOM05D003620 ORTHO05D004261 7.5e-06 53.9 41 68.3
arahy.Tifrunner.gnm1.ann1.UIRN9X Arachis hypogaea HOM05D003620 ORTHO05D004261 9.8e-06 53.5 32 78.1


User provided reference genes

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